Factsheet for Os03t0670100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96343	Sorghum	plastid	82.44	82.44
TraesCS5B01G369900.1	Wheat	plastid	79.04	78.15
Zm00001d019644_P003	Maize	plastid	82.44	76.78
Zm00001d003145_P001	Maize	mitochondrion	27.2	76.19
GSMUA_Achr1P08960_001	Banana	cytosol, mitochondrion, plastid	62.89	75.0
TraesCS5A01G367900.1	Wheat	golgi	79.32	73.49
HORVU5Hr1G091750.1	Barley	plastid	79.6	72.61
TraesCS5D01G377300.1	Wheat	cytosol, peroxisome, plastid	79.6	71.14
Zm00001d047131_P001	Maize	plastid	29.18	71.03
KRH40333	Soybean	plastid	68.27	69.86
VIT_04s0023g00290.t01	Wine grape	plastid	66.57	68.92
CDY16404	Canola	plastid	64.02	68.69
Bra022481.1-P	Field mustard	plastid	63.74	68.39
CDY57805	Canola	plastid	63.74	68.39
Solyc04g056650.2.1	Tomato	plastid	66.29	66.86
AT1G65410.1	Thale cress	plastid	65.16	66.67
KRH00900	Soybean	plastid	66.29	59.24
CDY39288	Canola	cytosol	26.35	46.97
Os11t0490800-02	Rice	plastid	18.98	23.18
Os06t0695800-01	Rice	unclear	21.25	21.68
Os10t0434900-00	Rice	cytosol, mitochondrion	7.93	20.9
Os02t0107900-00	Rice	cytosol	11.33	16.6
Os08t0398350-00	Rice	cytosol	20.11	8.44
Os06t0589300-01	Rice	plasma membrane	21.81	8.11
Os08t0398300-01	Rice	plasma membrane	20.96	7.73
Os08t0398000-01	Rice	plasma membrane	18.41	6.71
Os09t0360900-01	Rice	plasma membrane	2.83	2.16

Protein Annotations

Gene3D:3.40.50.300	EntrezGene:4333685	MapMan:5.8.2.2.3	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
ProteinID:ABF98111.1	EMBL:AK071650	ProteinID:BAF12782.1	ProteinID:BAS85678.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004611	GO:GO:0004613	GO:GO:0005488	GO:GO:0005524	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006094
GO:GO:0006810	GO:GO:0006869	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0017076
GO:GO:0055085	InterPro:IPR003439	EnsemblPlantsGene:Os03g0670100	EnsemblPlants:Os03t0670100-01	InterPro:P-loop_NTPase	PFAM:PF00005
ScanProsite:PS00211	PFscan:PS50893	PANTHER:PTHR43023	PANTHER:PTHR43023:SF3	UniProt:Q10FF1	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI0000DB4348	RefSeq:XP_015632347.1	SEG:seg	:	:

Description

ABC TRANSPORTER I FAMILY MEMBER 9Similar to ATP-binding protein of ABC transporter. (Os03t0670100-01)

Coordinates

chr3:-:26445311..26448758

Molecular Weight (calculated)

37872.8 Da

IEP (calculated)

8.240

GRAVY (calculated)

-0.071

Length

353 amino acids

Sequence
(BLAST)

001: MASPSIPAAL RHPHAHAAGL RLLRSSGDPC PPCTLPFRLC GVPLKKGHVY AGAVSATRSP GLGNAENLRE SPSLSRSWGM NGQIGDDHDI LIECRDVHKS
101: FGNKKVLNGI SFKIRHGEAV GIIGPSGTGK STVLKVMAGL LAPDKGDVII CGRKRHGLVS DEDISGVRIG LVFQSAALFD SLTVRENVGF LLYENSSLPE
201: ERIATLVTET LAAVGLKGVE DRMPSELSGG MKKRVALARS IIYDDTKETI EPEVILYDEP TAGLDPIAST VVEDLIRSVH VTGKDALGKP GKIASYVVVT
301: HQHSTIKRAV DRLLFLHEGK VVWEGMTQEF TTSTNPIVKQ FASGSLDGPI RYF

Best Arabidopsis Sequence Match ( AT1G65410.1 )
(BLAST)

001: MLSLSCSSSS SSLLPPSLHY HGSSSVQSIV VPRRSLISFR RKVSCCCIAP PQNLDNDATK FDSLTKSGGG MCKERGLEND SDVLIECRDV YKSFGEKHIL
101: KGVSFKIRHG EAVGVIGPSG TGKSTILKIM AGLLAPDKGE VYIRGKKRAG LISDEEISGL RIGLVFQSAA LFDSLSVREN VGFLLYERSK MSENQISELV
201: TQTLAAVGLK GVENRLPSEL SGGMKKRVAL ARSLIFDTTK EVIEPEVLLY DEPTAGLDPI ASTVVEDLIR SVHMTDEDAV GKPGKIASYL VVTHQHSTIQ
301: RAVDRLLFLY EGKIVWQGMT HEFTTSTNPI VQQFATGSLD GPIRY

Arabidopsis Description

TGD3Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9AT00]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.