Factsheet for Zm00001d047131_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003145_P001	Maize	mitochondrion	66.9	76.98
CDY39288	Canola	cytosol	51.72	37.88
EER96343	Sorghum	plastid	74.48	30.59
GSMUA_Achr1P08960_001	Banana	cytosol, mitochondrion, plastid	61.38	30.07
Os03t0670100-01	Rice	plastid	71.03	29.18
Zm00001d019644_P003	Maize	plastid	75.86	29.02
TraesCS5B01G369900.1	Wheat	plastid	70.34	28.57
CDY16404	Canola	plastid	63.45	27.96
Bra022481.1-P	Field mustard	plastid	63.45	27.96
VIT_04s0023g00290.t01	Wine grape	plastid	65.52	27.86
KRH40333	Soybean	plastid	66.21	27.83
Solyc04g056650.2.1	Tomato	plastid	66.9	27.71
CDY57805	Canola	plastid	62.76	27.66
HORVU5Hr1G091750.1	Barley	plastid	71.03	26.61
TraesCS5A01G367900.1	Wheat	golgi	69.66	26.51
AT1G65410.1	Thale cress	plastid	62.07	26.09
TraesCS5D01G377300.1	Wheat	cytosol, peroxisome, plastid	70.34	25.82
KRH00900	Soybean	plastid	66.21	24.3
Zm00001d014611_P001	Maize	cytosol, mitochondrion, plasma membrane	22.07	17.02
Zm00001d007328_P003	Maize	plastid	17.24	8.25
Zm00001d036927_P001	Maize	plasma membrane, plastid	23.45	3.52
Zm00001d050260_P001	Maize	mitochondrion	22.76	3.36
Zm00001d020208_P003	Maize	plasma membrane	21.38	3.27
Zm00001d050259_P002	Maize	plasma membrane	22.07	3.25
Zm00001d016396_P001	Maize	plasma membrane	15.86	3.01
Zm00001d032279_P005	Maize	golgi, plastid	19.31	2.89
Zm00001d053603_P005	Maize	plasma membrane	17.93	2.05
Zm00001d016395_P001	Maize	plasma membrane, plastid	12.41	2.05

Protein Annotations

EnsemblPlants:Zm00001d047131_P001	EnsemblPlants:Zm00001d047131_T001	EnsemblPlantsGene:Zm00001d047131	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:ABC_transporter-like
InterPro:IPR003439	InterPro:P-loop_NTPase	PANTHER:PTHR43023	PANTHER:PTHR43023:SF3	PFAM:PF00005	ProteinID:AQL05668.1
SUPFAM:SSF52540	UniParc:UPI00084448DD	UniProt:A0A1D6P752	MapMan:5.8.2.2.3	:	:

Description

Protein TRIGALACTOSYLDIACYLGLYCEROL 3 chloroplastic

Coordinates

chr9:-:119480738..119483689

Molecular Weight (calculated)

15719.5 Da

IEP (calculated)

8.720

GRAVY (calculated)

0.317

Length

145 amino acids

Sequence
(BLAST)

001: MSAFCFSITV VIMQPARMPQ RDKSIGMSRH GEAVGIIGPS GTGKSTILKV MAGLLALDKG DVIICGKKRH GLVSDEDIEG LRIGLVFQSA AFFYSLTVRE
101: NVGFLLYENS SLPEDRIGEL VKETLAAVGL KMLYNTLAIP NFKLI

Best Arabidopsis Sequence Match ( AT1G65410.1 )
(BLAST)

001: MLSLSCSSSS SSLLPPSLHY HGSSSVQSIV VPRRSLISFR RKVSCCCIAP PQNLDNDATK FDSLTKSGGG MCKERGLEND SDVLIECRDV YKSFGEKHIL
101: KGVSFKIRHG EAVGVIGPSG TGKSTILKIM AGLLAPDKGE VYIRGKKRAG LISDEEISGL RIGLVFQSAA LFDSLSVREN VGFLLYERSK MSENQISELV
201: TQTLAAVGLK GVENRLPSEL SGGMKKRVAL ARSLIFDTTK EVIEPEVLLY DEPTAGLDPI ASTVVEDLIR SVHMTDEDAV GKPGKIASYL VVTHQHSTIQ
301: RAVDRLLFLY EGKIVWQGMT HEFTTSTNPI VQQFATGSLD GPIRY

Arabidopsis Description

TGD3Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9AT00]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.