CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g068180.2.1	Tomato	plastid	65.9	62.77
VIT_14s0068g01730.t01	Wine grape	plastid	66.67	61.27
AT5G14100.1	Thale cress	plastid	65.13	61.15
Bra008779.1-P	Field mustard	plastid	63.6	60.58
TraesCS3A01G399500.1	Wheat	plastid	61.69	60.3
CDX69605	Canola	plastid	63.22	60.22
CDY58413	Canola	cytosol, plastid	63.22	60.22
TraesCS3D01G393600.2	Wheat	plastid	62.07	58.7
HORVU3Hr1G089880.8	Barley	plastid	60.92	58.46
TraesCS3B01G432400.1	Wheat	plastid	61.3	58.39
KXG28389	Sorghum	plastid	60.15	57.72
Os11t0490800-02	Rice	plastid	60.92	55.02
GSMUA_Achr1P13520_001	Banana	plastid	64.75	53.99
Zm00001d007328_P003	Maize	plastid	55.56	47.85
TraesCS3A01G399400.1	Wheat	cytosol	37.55	38.74
KRH41857	Soybean	plasma membrane	23.37	23.46
KRH40333	Soybean	plastid	23.75	17.97
KRH00900	Soybean	plastid	24.14	15.95
KRH54520	Soybean	plasma membrane, plastid	20.69	6.69
KRH63387	Soybean	plasma membrane, plastid	21.07	5.72
KRH56933	Soybean	plasma membrane, plastid	20.31	5.58
KRH03450	Soybean	plasma membrane, plastid	19.92	5.45
KRH54517	Soybean	plasma membrane	19.92	5.38
KRG88422	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	9.58	5.09
KRH63384	Soybean	plasma membrane	12.26	4.4
KRH66908	Soybean	cytosol	21.07	3.01
KRH63056	Soybean	extracellular, plasma membrane, vacuole	0.38	1.18

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0EVR8	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	EMBL:ACUP02011985
EnsemblPlantsGene:GLYMA_19G094500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536
GO:GO:0009941	GO:GO:0016020	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	EnsemblPlants:KRG94568
ProteinID:KRG94568	ProteinID:KRG94568.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR43553
PANTHER:PTHR43553:SF12	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI00054A6D2A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:+:33428734..33446660

Molecular Weight (calculated)

29077.4 Da

IEP (calculated)

9.900

GRAVY (calculated)

-0.009

Length

261 amino acids

Sequence
(BLAST)

001: MTTVLRPPIG LRFLQPPQLS PSPTSCVSFS LSLKLPRINS NYSSFEVRDV TYQPPGTQLR LLNSVSFSLP EKSFGLIFGQ SGSGKTTLLQ LLAGISKPTS
101: GSIYIQEYES DGNPSQPPEP LVPERVGIVF QFPERYFVAD NVLDEVTFGW PRQKGNHHLR ENLALGLQRA INWVGLSGIS LNKNPHSLSG GYKRRLALAI
201: QLVQTPDLLI LDEPLAGLDW KARADVVKLL KHLKKELTVL VVSHDLRLFQ FTLLVFVYLA F

Best Arabidopsis Sequence Match ( AT5G14100.1 )
(BLAST)

001: MAVSTFSSPT PVFGIAEPPA SFSSTAIGWK QPLRFRRTKK PRVISCDYSC IEVRDVCYRP PGTQLNILNG VNFSLREKSF GLIFGKSGSG KTTLLQLLAG
101: LNKPTSGSIC IQGYGDDGQP KADPDLLPTE KVGIVFQFPE RFFVADNVLD EITFGWPRQK GSLQLKEQLT SNLQRAFNWV GLDSIPLDKD PQLLSGGYKR
201: RLALAIQLVQ TPDLLILDEP LAGLDWKARA DVAKLLKHLK KELTLLVVSH DLRELAALVD QSWRMETGGV LVAERPPL

Arabidopsis Description

ABCI11ABC transporter I family member 11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEF6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.