Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 4
- plasma membrane 5
- golgi 3
- endoplasmic reticulum 3
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88422 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 87.06 | 15.07 |
| KRH54520 | Soybean | plasma membrane, plastid | 92.94 | 9.79 |
| KRH63384 | Soybean | plasma membrane | 82.35 | 9.62 |
| KRH56933 | Soybean | plasma membrane, plastid | 80.0 | 7.17 |
| KRH03450 | Soybean | plasma membrane, plastid | 77.65 | 6.92 |
| CDY02115 | Canola | extracellular, mitochondrion, plasma membrane, plastid | 25.88 | 6.03 |
| KRH63387 | Soybean | plasma membrane, plastid | 23.53 | 2.08 |
| KRH54517 | Soybean | plasma membrane | 23.53 | 2.07 |
| KRH66908 | Soybean | cytosol | 16.47 | 0.77 |
| KRH40333 | Soybean | plastid | 2.35 | 0.58 |
| KRH00900 | Soybean | plastid | 2.35 | 0.51 |
| KRG94568 | Soybean | mitochondrion | 1.18 | 0.38 |
| KRH41857 | Soybean | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | InterPro:ABCA | EMBL:ACUP02002593 | EnsemblPlantsGene:GLYMA_04G152300 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0042626 | GO:GO:0055085 | UniProt:K7KK43 | EnsemblPlants:KRH63056 | ProteinID:KRH63056 |
| ProteinID:KRH63056.1 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF141 | TMHMM:TMhelix | UniParc:UPI0002961599 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:34015396..34016563
Molecular Weight (calculated)
9577.7 Da
IEP (calculated)
3.545
GRAVY (calculated)
1.041
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MPCFVIFGSV IGLNFFTMND YNIQFVFYFI YINLQISLAF LLASLFSNVK LATVLAYIGV FGAGLLAGFL FQFFVQDTSF PNDDD
001: MVNKFFLLLV LMGNMYSNSS GFDGDLAYYV LGSSSFPAYT NHMDSAFISD LPIYNIQHEC SPNSSFSILI HQSPLAFPKE VNCVQGLNLW RNSSSDVNNE
101: LFKGYRKGNP DKKINEFAGA FDFQNTNGNN LNVSVWYNST YKNDTVVRPM ALIRVPRLVN LASNAYLEFL KGSETKILFE YVKEMPKPET KLSLDIASLI
201: GPLFFTWVIL LLFPVILTTL VYEKQQRLRI MMKMHGLGDV PYWIVSYTYF LLISILYMLC FAIFGSLIGL NFFRLNDYSI QLVFFFICIN LQISVAFLAS
301: AMFSDVKTAT VIAYIYVFGT GLLGIFLFQF FLEDPLFPRG WIIAMELYPG FSLYRGLYEL SQSAFAGDYR GIDGMKWRDF GNGMKEVTCI MLIEWLLLLG
401: LAYYIDQIIY SRKHPLFFLL QSTSKKKQHF SDNKISKVVV EMEKPDVCRE REKVEQCLLK STRDSAVLCN NLKKVYSGKD GNPQKLAVRG LSLALPQGEC
501: FGMLGPNGAG KTSFINMMTG IIKPSSGTAF VQGLDILTDM DRIYTTIGVC PQHDLLWEKL SGREHLLFYG RLKNLKGSVL TQAVEESLRS VNLFHGGIGD
601: KQVSKYSGGM KRRLSVAISL IGSPKVVYMD EPSTGLDPAS RKSLWDVVKR AKRKGAIILT SRVF
101: LFKGYRKGNP DKKINEFAGA FDFQNTNGNN LNVSVWYNST YKNDTVVRPM ALIRVPRLVN LASNAYLEFL KGSETKILFE YVKEMPKPET KLSLDIASLI
201: GPLFFTWVIL LLFPVILTTL VYEKQQRLRI MMKMHGLGDV PYWIVSYTYF LLISILYMLC FAIFGSLIGL NFFRLNDYSI QLVFFFICIN LQISVAFLAS
301: AMFSDVKTAT VIAYIYVFGT GLLGIFLFQF FLEDPLFPRG WIIAMELYPG FSLYRGLYEL SQSAFAGDYR GIDGMKWRDF GNGMKEVTCI MLIEWLLLLG
401: LAYYIDQIIY SRKHPLFFLL QSTSKKKQHF SDNKISKVVV EMEKPDVCRE REKVEQCLLK STRDSAVLCN NLKKVYSGKD GNPQKLAVRG LSLALPQGEC
501: FGMLGPNGAG KTSFINMMTG IIKPSSGTAF VQGLDILTDM DRIYTTIGVC PQHDLLWEKL SGREHLLFYG RLKNLKGSVL TQAVEESLRS VNLFHGGIGD
601: KQVSKYSGGM KRRLSVAISL IGSPKVVYMD EPSTGLDPAS RKSLWDVVKR AKRKGAIILT SRVF
Arabidopsis Description
ABCA8ABC transporter A family member 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.