Factsheet for Bra000236.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
extracellular 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35403	Canola	mitochondrion, plasma membrane	99.51	98.55
CDY22536	Canola	mitochondrion, plasma membrane	97.45	96.87
AT2G41700.1	Thale cress	mitochondrion, plasma membrane	91.48	89.53
GSMUA_AchrUn_...	Banana	cytosol	5.16	79.17
VIT_08s0007g08730.t01	Wine grape	mitochondrion, plasma membrane	72.86	71.34
KRH66908	Soybean	cytosol	66.45	67.03
Solyc03g113080.2.1	Tomato	cytosol	6.57	33.8
Bra012928.1-P	Field mustard	plasma membrane	13.52	26.86
Bra018116.1-P	Field mustard	golgi, mitochondrion	13.84	25.86
Bra018114.1-P	Field mustard	cytosol, peroxisome, plasma membrane	7.93	23.21
Bra004271.1-P	Field mustard	cytosol	3.31	23.11
Bra012930.1-P	Field mustard	plasma membrane	11.35	23.02
Bra008779.1-P	Field mustard	plastid	3.37	22.63
Bra019513.1-P	Field mustard	plasma membrane	10.21	21.05
Bra012931.1-P	Field mustard	cytosol, peroxisome, plasma membrane	6.62	20.61
Bra033785.1-P	Field mustard	plasma membrane	10.48	20.49
Solyc03g113070.2.1	Tomato	plasma membrane	6.41	20.49
Bra018113.1-P	Field mustard	plasma membrane	10.42	20.38
Bra022481.1-P	Field mustard	plastid	3.64	20.36
Bra018115.1-P	Field mustard	plasma membrane	10.21	20.3
Bra015049.1-P	Field mustard	plasma membrane	9.61	19.82
Bra038152.1-P	Field mustard	plasma membrane, vacuole	4.4	19.76
Bra033786.1-P	Field mustard	cytosol, mitochondrion, nucleus	2.99	18.46
Bra012927.1-P	Field mustard	cytosol	5.54	16.59

Protein Annotations

MapMan:24.1.3.2.1	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABCA	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS
EnsemblPlantsGene:Bra000236	EnsemblPlants:Bra000236.1	EnsemblPlants:Bra000236.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	UniProt:M4C7Q8	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF12698	ScanProsite:PS00211
PFscan:PS50893	PANTHER:PTHR19229	PANTHER:PTHR19229:SF36	SMART:SM00382	SUPFAM:SSF52540	TMHMM:TMhelix
UniParc:UPI0002540353	SEG:seg	:	:	:	:

Description

AT2G41700 (E=0.0) | ATPase, coupled to transmembrane movement of substances / amino acid transmembrane transporter

Coordinates

chrA03:-:10072906..10084722

Molecular Weight (calculated)

204545.0 Da

IEP (calculated)

6.662

GRAVY (calculated)

0.137

Length

1842 amino acids

Sequence
(BLAST)

0001: MGTWRRQLKA MLRKNWLLKT RHPFVTSAEI LLPTVVMLLL IAVRTRVDTT IHPARSNIEK DTVVQVGEGI SPSFPQVLEL LLADGEFLAF APDTDETNNM
0101: IDILSLKFPD LRLVTRIFKD DVELETYITS AHYAVCSDVR NCSNPKLKGA VVFHEQGPHV YDYSIRLNHT WALAGFPNVK SIMDTNGPYI NDLEMGINTI
0201: PTMQYSFSGF LTLQQVVDSF IIFASQQNMD LPSSHASLGS ALSLEMPWTM FSPSKIRMVP FPTREYTDDE FQSIVKSVMG LLYLLGFLFP ISRLISYSVF
0301: EKVVSGSILC EQKIREGLYM MGLKDEIFHL SWFITYALQA VRIVRWDYYS FSIMLSFLIS TFFTRAKTAV AVGTLAFLGA FFPYYTVNDE SVSMYVYPLF
0401: WVLKVVASLL SPTAFALGSI NFADYERAHV GLRWSNIWLA SSGVSFFVCL LMMLLDSILY CAIGLYLDKV LPRENGVRYP WNFIFNKCFG RKKNNQYCIP
0501: GLNTNIEGTQ GEPFDPVIES ISLEMRQQEL DGRCIQIKNL HKVFASGRGN CCAVNSLRLT LYENQILSLL GHNGAGKSTT ISMLVGLLPP TSGDALILGN
0601: SIVTNMDEIR KELGVCPQHD ILFPELTVRE HLEMFAVLKG VKEDSLKSTV TDMAEEVGLS DKINTLVRAL SGGMKRKLSL GIALIGNSKV IILDEPTSGM
0701: DPYSMRLTWQ LIKKIKKGRI ILLTTHSMDE AEELGDRIGI MANGSLKCCG SSMFLKHHYG VGYTLTLVKT SPAVSVAAHI VHRHIPSATC VSEVGNEISF
0801: KLPLASLPCF ENMFREIESC MKSSVDRSRI SEIEDSDYPG IQSYGISVTT LEEVFLRVAG CNLDIEDKQE DTFASPDTEA SLVCIESVQK STIQPKLLAS
0901: CNEGAGVIIT SIAKACRLIV AAVWAFIGFI SMQCCGCSVI SRSMFWRHCK ALFIKRARSA FRDRKTVAFQ LIIPAVFLLF GLLLLQLKPH PDQKSITLTT
1001: AYFNPLLSGN GGGGPIPYDL SEPIAKEVAE YIEGGWIQPL RNSSYKFPNP KEALADAIDA AGPTLGPTLL SMSEFLMSSF DQSYESRYGA VLMDSQHPDG
1101: SVGYTVLHNS TCQHAGPIYI NVMHSALLRL ASGNKNMSIQ TRNHPLPPTK TQRLQRHDLD AFSAAIIVSI AFSFIPASFA VPIVKEREVK AKHQQLISGV
1201: SVLSYWLSTY VWDFVSFLFP STFAIILFYA FGLEQFIGIG RFLPTVLMLL EYGLAIASST YCLTFFFTEH SMAQNVILMV HFFSGLILMV ISFVMGLIPA
1301: TVNANSYLKT FFRLSPGFCF SDGLASLALL RQGMKDKSSH GVFDWNVTGA SISYLALESI FYFLLTLGLE LLPVQKMMSF SIGEWWQNFK VFKQGAGSSS
1401: TEPLLKDSTG AISADMEDDI DVQEERNRVI SGLTDNTIFY LQNLRKVYPG SNHHGPKVAV QSLTFSVQAG ECFGFLGTNG AGKTTTLSML SGEETPTSGT
1501: AFVFGKDIVA SPKAIRQHIG YCPQFDALFE YLTVKEHLEL YARIKGVVDY RIDNVVMEKL VEFDLLKHSH KPSFTLSGGN KRKLSVAIAM IGDPPIVILD
1601: EPSTGMDPVA KRFMWDVISR LSTRSGKTAV ILTTHSMNEA QALCTRIGIM VGGRLRCIGS PQHLKTRFGN HLELEVKPNE VSHVDLENLC QMIQQWLFNV
1701: PSQPRSLLGD LEVCIGVSDS ITPDTASASE ISLSPEMIQS IAKYLGNEQR VSTLVPPMPE EDVGFDEQLS EQLFRDGGIP LPIFAEWWLT KEKFSALDSF
1801: IQSSFPGATF KSCNGLIIKY QLPFGEGGLS LADAFGHLER NR

Best Arabidopsis Sequence Match ( AT2G41700.1 )
(BLAST)

0001: MGSSKRQFKA MLRKNWLLKT RHPFVTSAEI LLPTIVMLLL IAVRTRVDTT IHPAHSNIDK DTVVEVGKGN SPSFPEVLKL LLAEGDFLAF APDTDETNNM
0101: IDILSLKFPE LRLVTKIFKD DIELETYITS AHYGVCSEVR NCSNPKIKGA VVFHEQGPHL FDYSIRLNHT WAFAGFPNVK SIMDTNGPYI NDLEMGINTI
0201: PTMQYSFSGF LTLQQVVDSF IIFASQQNND LPLSHSNLSS ALRFELPWTL FSPSVIRMVP FPTREYTDDE FQSIVKSVMG LLYLLGFLFP ISRLISYSVF
0301: EKEQKIREGL YMMGLKDEIF HLSWFITYAL QFALCSGIIT ACTMGSLFKY SDKTLVFTYF FLFGLSAIML SFMISTFFTR AKTAVAVGTL TFLGAFFPYY
0401: TVNDESVSMV LKVVASLLSP TAFALGSINF ADYERAHVGL RWSNIWRASS GVSFFVCLLM MLLDSILYCA LGLYLDKVLP RENGVRYPWN FIFSKYFGRK
0501: KNNLQNRIPG FETDMFPADI EVNQGEPFDP VFESISLEMR QQELDGRCIQ VRNLHKVYAS RRGNCCAVNS LQLTLYENQI LSLLGHNGAG KSTTISMLVG
0601: LLPPTSGDAL ILGNSIITNM DEIRKELGVC PQHDILFPEL TVREHLEMFA VLKGVEEGSL KSTVVDMAEE VGLSDKINTL VRALSGGMKR KLSLGIALIG
0701: NSKVIILDEP TSGMDPYSMR LTWQLIKKIK KGRIILLTTH SMDEAEELGD RIGIMANGSL KCCGSSIFLK HHYGVGYTLT LVKTSPTVSV AAHIVHRHIP
0801: SATCVSEVGN EISFKLPLAS LPCFENMFRE IESCMKNSVD RSKISEIEDS DYPGIQSYGI SVTTLEEVFL RVAGCNLDIE DKQEDIFVSP DTKSSLVCIG
0901: SNQKSSMQPK LLASCNDGAG VIITSVAKAF RLIVAAVWTL IGFISIQCCG CSIISRSMFW RHCKALFIKR ARSACRDRKT VAFQFIIPAV FLLFGLLFLQ
1001: LKPHPDQKSI TLTTAYFNPL LSGKGGGGPI PFDLSVPIAK EVAQYIEGGW IQPLRNTSYK FPNPKEALAD AIDAAGPTLG PTLLSMSEFL MSSFDQSYQS
1101: RYGSILMDGQ HPDGSLGYTV LHNGTCQHAG PIYINVMHAA ILRLATGNKN MTIQTRNHPL PPTKTQRIQR HDLDAFSAAI IVNIAFSFIP ASFAVPIVKE
1201: REVKAKHQQL ISGVSVLSYW LSTYVWDFIS FLFPSTFAII LFYAFGLEQF IGIGRFLPTV LMLLEYGLAI ASSTYCLTFF FTEHSMAQNV ILMVHFFSGL
1301: ILMVISFVMG LIPATASANS YLKNFFRLSP GFCFSDGLAS LALLRQGMKD KSSHGVFEWN VTGASICYLG LESIFYFLVT LGLELMPVQK VMSFSIGEWW
1401: QNLKAFKQGA GSSSTEPLLK DSTGAISTDM EDDIDVQEER DRVISGLSDN TMLYLQNLRK VYPGDKHHGP KVAVQSLTFS VQAGECFGFL GTNGAGKTTT
1501: LSMLSGEETP TSGTAFIFGK DIVASPKAIR QHIGYCPQFD ALFEYLTVKE HLELYARIKG VVDHRIDNVV TEKLVEFDLL KHSHKPSFTL SGGNKRKLSV
1601: AIAMIGDPPI VILDEPSTGM DPVAKRFMWD VISRLSTRSG KTAVILTTHS MNEAQALCTR IGIMVGGRLR CIGSPQHLKT RYGNHLELEV KPNEVSNVEL
1701: ENFCQIIQQW LFNVPTQPRS LLGDLEVCIG VSDSITPDTA SASEISLSPE MVQRIAKFLG NEQRVSTLVP PLPEEDVRFD DQLSEQLFRD GGIPLPIFAE
1801: WWLTKEKFSA LDSFIQSSFP GATFKSCNGL SIKYQLPFGE GGLSLADAFG HLERNRNRLG IAEYSISQST LETIFNHFAA NS

Arabidopsis Description

ABCA1ABC transporter A family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84M24]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.