Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96058 | Canola | cytosol | 89.35 | 89.02 |
| Bra004271.1-P | Field mustard | cytosol | 89.35 | 89.02 |
| CDY01873 | Canola | cytosol | 88.97 | 88.64 |
| Solyc06g068600.2.1 | Tomato | cytosol | 55.13 | 78.38 |
| Zm00001d014611_P001 | Maize | cytosol, mitochondrion, plasma membrane | 51.71 | 72.34 |
| KRH41857 | Soybean | plasma membrane | 68.44 | 69.23 |
| Solyc03g117810.2.1 | Tomato | cytosol | 69.2 | 69.2 |
| VIT_11s0052g00540.t01 | Wine grape | cytosol | 70.34 | 69.03 |
| PGSC0003DMT400036875 | Potato | cytosol | 68.44 | 68.44 |
| TraesCS7A01G427700.1 | Wheat | cytosol | 66.92 | 67.69 |
| TraesCS7B01G327900.1 | Wheat | cytosol, golgi, mitochondrion | 66.92 | 67.69 |
| EER90300 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion | 68.06 | 66.79 |
| TraesCS7D01G420100.1 | Wheat | cytosol, golgi, mitochondrion | 65.78 | 65.78 |
| PGSC0003DMT400074438 | Potato | extracellular | 69.96 | 65.71 |
| TraesCS4A01G414400.1 | Wheat | cytosol | 65.4 | 65.4 |
| TraesCS4B01G315100.1 | Wheat | cytosol | 64.64 | 64.64 |
| TraesCS4B01G336400.1 | Wheat | cytosol, plastid | 66.16 | 61.27 |
| TraesCS4D01G332100.1 | Wheat | cytosol | 65.4 | 60.14 |
| HORVU7Hr1G098490.2 | Barley | plastid | 66.16 | 59.59 |
| HORVU4Hr1G079940.5 | Barley | cytosol | 66.16 | 55.77 |
| GSMUA_Achr7P19550_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 64.64 | 54.84 |
| Os06t0695800-01 | Rice | unclear | 66.92 | 50.87 |
| Os10t0434900-00 | Rice | cytosol, mitochondrion | 21.67 | 42.54 |
| AT5G14100.1 | Thale cress | plastid | 24.71 | 23.38 |
| AT1G65410.1 | Thale cress | plastid | 27.38 | 20.87 |
| AT3G47770.2 | Thale cress | endoplasmic reticulum, golgi, plasma membrane, plastid | 24.33 | 6.91 |
| AT3G47780.1 | Thale cress | plasma membrane | 23.95 | 6.74 |
| AT3G47740.1 | Thale cress | plasma membrane | 23.57 | 6.65 |
| AT3G47750.1 | Thale cress | mitochondrion, plasma membrane | 23.57 | 6.62 |
| AT3G47790.1 | Thale cress | plasma membrane | 22.43 | 6.55 |
| AT5G61700.1 | Thale cress | plasma membrane | 22.43 | 6.43 |
| AT3G47760.3 | Thale cress | plasma membrane | 22.81 | 6.41 |
| AT5G61740.1 | Thale cress | plasma membrane | 21.67 | 6.27 |
| AT5G61730.2 | Thale cress | plasma membrane, plastid | 20.91 | 5.79 |
| AT5G61690.2 | Thale cress | plasma membrane | 20.53 | 5.67 |
| AT3G47730.1 | Thale cress | mitochondrion, plasma membrane | 20.91 | 5.6 |
| AT2G41700.1 | Thale cress | mitochondrion, plasma membrane | 22.05 | 3.08 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:843122 | UniProt:A0A178WE46 | InterPro:AAA+_ATPase | ProteinID:AAG52004.1 |
| EMBL:AB567722 | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:AEE34724.1 | EMBL:AK117705 | ArrayExpress:AT1G67940 |
| EnsemblPlantsGene:AT1G67940 | RefSeq:AT1G67940 | TAIR:AT1G67940 | RefSeq:AT1G67940-TAIR-G | EnsemblPlants:AT1G67940.1 | TAIR:AT1G67940.1 |
| Symbol:ATNAP3 | EMBL:AY086511 | Unigene:At.48348 | EMBL:BT005105 | UniProt:D6RVY5 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005315 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015833 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0035435 | GO:GO:0055085 | InterPro:IPR003439 | RefSeq:NP_176961.1 |
| ProteinID:OAP15312.1 | InterPro:P-loop_NTPase | PFAM:PF00005 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0006085 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020123 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025034 |
| PO:PO:0025257 | PO:PO:0025281 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR43423 | PANTHER:PTHR43423:SF1 |
| InterPro:Phosp_transpt1 | UniProt:Q9C9W0 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI000000C552 | SEG:seg |
Description
ABCI17Sensitive to aluminum rhizotoxicity 1 [Source:UniProtKB/TrEMBL;Acc:D6RVY5]
Coordinates
chr1:+:25477670..25478803
Molecular Weight (calculated)
28678.7 Da
IEP (calculated)
5.194
GRAVY (calculated)
-0.011
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSLWSNESD GSLREHLVDV VVSGSEPKIR VHDLTRVADD GSRILKGVTI DIPKGMIVGV IGPSGSGKST FLRSLNRLWE PPESTVFLDG EDITNVDVIA
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS
101: LRRRVGMLFQ LPVLFQGTVA DNVRYGPNLR GEKLSDEEVY KLLSLADLDA SFAKKTGAEL SVGQAQRVAL ARTLANEPEV LLLDEPTSAL DPISTENIED
201: VIVKLKKQRG ITTVIVSHSI KQIQKVADIV CLVVDGEIVE VLKPSELSHA THPMAQRFLQ LSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.