Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- plasma membrane 4
- cytosol 1
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400083147 | Potato | plasma membrane | 96.18 | 95.68 |
| Solyc03g113080.2.1 | Tomato | cytosol | 24.39 | 64.25 |
| Solyc03g113070.2.1 | Tomato | plasma membrane | 39.02 | 63.89 |
| Solyc06g070960.1.1 | Tomato | plasma membrane | 51.86 | 52.81 |
| Solyc06g070920.2.1 | Tomato | extracellular, plasma membrane | 19.83 | 29.31 |
| Solyc06g070950.1.1 | Tomato | plasma membrane | 24.18 | 25.59 |
| Solyc03g113040.2.1 | Tomato | plastid | 24.81 | 24.76 |
| Solyc03g113060.2.1 | Tomato | extracellular | 23.97 | 23.94 |
| Solyc02g068180.2.1 | Tomato | plastid | 5.83 | 20.07 |
| Solyc06g068600.2.1 | Tomato | cytosol | 3.92 | 20.0 |
| Solyc03g117810.2.1 | Tomato | cytosol | 5.41 | 19.39 |
| Solyc04g056650.2.1 | Tomato | plastid | 7.1 | 19.14 |
| Solyc04g015970.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 24.92 | 12.31 |
| Solyc06g070930.2.1 | Tomato | plastid | 2.65 | 9.12 |
Protein Annotations
| MapMan:24.1.3.2.1 | Gene3D:3.40.50.300 | MapMan:5.8.5 | InterPro:AAA+_ATPase | InterPro:ABCA | InterPro:ABC_transporter-like |
| InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006869 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 |
| GO:GO:0043231 | GO:GO:0055085 | InterPro:IPR003439 | UniProt:K4C8G7 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF12698 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF193 | SMART:SM00382 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc06g070940.2 | EnsemblPlants:Solyc06g070940.2.1 | TMHMM:TMhelix | UniParc:UPI0002766D36 | SEG:seg |
Description
No Description!
Coordinates
chr6:+:43560999..43566271
Molecular Weight (calculated)
105100.0 Da
IEP (calculated)
8.386
GRAVY (calculated)
0.031
Length
943 amino acids
Sequence
(BLAST)
(BLAST)
001: MELQGGIPLL MQQYKALFKK NLLLALRNKP ATFLQLFSSF FFIFLLFCIK LSDESRNADN TFAKELRDPK PLMAPSIPPC EDKFYIKTPC YDFIWSGKHS
101: KTIGDVVKGI MANNPGRPIP ANKVLAFNTA QDVDKWLFDN PVRCPAAVHF TIVKGNKISY GIQTNSTDVV KRGVTEDPTF KFQIPLQIAV EREIARNLIG
201: DPKFPWDVSF KEFPHPPGDV YNEVTLSAMV FFMAVAIFGF VFQVSALITE KELKLRQAMT MMGLFDTAYW LSWITWEGLL IFISSTLTVI FGMMFQFEFF
301: LRNNVLVVFL LFFLFQLTMV TFGYWLSTFL TKAASATNVA FVIFIVGFIT MIGSQLANYP YSAAYSNKHR IYWSLFPPNL LTIGLQLLAK ATESPKDPGI
401: SWSTRAKCLP KEPDCVTTMH DVYILLVKTF FFWLVLAIYF DNIIPNISGV RKSKLYFLYP GYWTGNGGSS VKEGGNCSIC SGSLPRLDPI TPDDEDVLTE
501: ENTVKKQAME GDNSNNAVQI RGLIKTYPGK KTGGCCCCCC RKTSPPFHSV KGLWLNVEKD QLLCMLGPNG AGKTTTISCL TGINPVTAGD VHTKLYGHDK
601: RRRMMGVCPQ FDILWDALSG QENLQIFANI KGLPPASIDT VVAQLLSQSK ITKVSAKMRS CSYSGGMKRR LSVAIALIGD PKLVILDEPT TGMDPITRRH
701: VWDIIEKAKK GRVIILTTHS MEEADVLSDR IGIMAKGRLR CIGTSIRLKA KFGTGFIANV GLVSESTSPD AVKHFFKSQL DVVPKDENKC FLTYVIPHER
801: EKMLTEFFAE LQARQSEFGV KDIQLGLTTL EEVFMNIAKQ ADVETAIAEG RFKTLTLNSG DSVEVPVGAQ FIGIPGTKSP QNPGGVMVEV YWEPDETGSP
901: CIYGISEEMP IPPHIQLRDP PTNNSPTNQG IVIDPSQLKM HLS
101: KTIGDVVKGI MANNPGRPIP ANKVLAFNTA QDVDKWLFDN PVRCPAAVHF TIVKGNKISY GIQTNSTDVV KRGVTEDPTF KFQIPLQIAV EREIARNLIG
201: DPKFPWDVSF KEFPHPPGDV YNEVTLSAMV FFMAVAIFGF VFQVSALITE KELKLRQAMT MMGLFDTAYW LSWITWEGLL IFISSTLTVI FGMMFQFEFF
301: LRNNVLVVFL LFFLFQLTMV TFGYWLSTFL TKAASATNVA FVIFIVGFIT MIGSQLANYP YSAAYSNKHR IYWSLFPPNL LTIGLQLLAK ATESPKDPGI
401: SWSTRAKCLP KEPDCVTTMH DVYILLVKTF FFWLVLAIYF DNIIPNISGV RKSKLYFLYP GYWTGNGGSS VKEGGNCSIC SGSLPRLDPI TPDDEDVLTE
501: ENTVKKQAME GDNSNNAVQI RGLIKTYPGK KTGGCCCCCC RKTSPPFHSV KGLWLNVEKD QLLCMLGPNG AGKTTTISCL TGINPVTAGD VHTKLYGHDK
601: RRRMMGVCPQ FDILWDALSG QENLQIFANI KGLPPASIDT VVAQLLSQSK ITKVSAKMRS CSYSGGMKRR LSVAIALIGD PKLVILDEPT TGMDPITRRH
701: VWDIIEKAKK GRVIILTTHS MEEADVLSDR IGIMAKGRLR CIGTSIRLKA KFGTGFIANV GLVSESTSPD AVKHFFKSQL DVVPKDENKC FLTYVIPHER
801: EKMLTEFFAE LQARQSEFGV KDIQLGLTTL EEVFMNIAKQ ADVETAIAEG RFKTLTLNSG DSVEVPVGAQ FIGIPGTKSP QNPGGVMVEV YWEPDETGSP
901: CIYGISEEMP IPPHIQLRDP PTNNSPTNQG IVIDPSQLKM HLS
001: MTLQRGLPLL LQQYTALFKK NLLLSWRSKR ATFLQLFASF FFILLIFCIQ AAMEKSFASS TALKTVTDPT ALISPPIPPC EDKFFVNLPC YDFVWSGNRS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
101: SKVTQIVNAI MKNNPGRSIP IEKVRSFVDP EAVDTWLMAN PLLVPGALHF IERNATVISY GIQTNSTPEM NRGRFEDPTF KFQIPLQIAA EREIARSLIG
201: DPNFNWVVGF KEFPHPTIEA IVALDTIGPT FFLAVAMFGF VLQISSLITE KELKLRQAMT MMGVFDTAYW LSWLTWEGIL TAISALLTVL FGMMFQFDFF
301: LKNSFPVVFL LFMLFQFNLI GLAFMLSAFI SKSTSATTVG FFVFLVGFVT QLATSSGFPY AKKYSRMIRA LWSLFPPNTF SQGLKLLADA TSTPQDPGIS
401: WSKRAECGPN DDTGCVLTIN DIYLWLLGTF FLWFVLALYF DNITPNASGV RKSIFYFLKP GYWTGKGGNR VEEGGICSCI GSVPPVDHIT PDDEDVLEEE
501: TLVKQHSMEG LVDPNVAVQI RGLAKTYPGT TKFGCCKCKK TSPFHALKGL WMNIAKDQLF CLLGPNGAGK TTTINCLTGL FPVTGGDALI YGNSIRSSVG
601: MSNIRKMIGV CPQFDILWDA LSGEEHLKLF ASIKGLPPSS INSMVEKSLA EVKLTEAGKI RAGSYSGGMK RRLSVAVSLI GDPKLVFLDE PTTGMDPITR
701: RHVWDIIQET KKGRAIILTT HSMEEADILS DRIGIMAKGR LRCIGTSIRL KSRFGTGFIA NISFVESNNH NGEAGSDSRE PVKKFFKDHL KVKPIEENKA
801: FMTFVIPHDK ENLLTSFFAE LQDREEEFGI SDIQLGLATL EEVFLNIARK AELESAAVDG TMVTLDLTSG SSVEIPVGAR FIGIPGTETA ENPRGVMVEV
901: YWQQDESGSL CISGHSTEMP IPENIPVTDP VAPGHGGVNL LGRRGRRQVQ GIVIDPEFAT FTRSGSTSSR RFSRSGSSRR FSS
Arabidopsis Description
ABCA2ATH1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6R6]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.