Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- endoplasmic reticulum 1
- mitochondrion 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 5.13 | 81.67 |
| Solyc03g113080.2.1 | Tomato | cytosol | 6.44 | 34.36 |
| Solyc06g070960.1.1 | Tomato | plasma membrane | 12.89 | 26.57 |
| Solyc06g070920.2.1 | Tomato | extracellular, plasma membrane | 8.8 | 26.33 |
| Solyc06g070940.2.1 | Tomato | plasma membrane | 12.31 | 24.92 |
| Solyc06g068600.2.1 | Tomato | cytosol | 2.3 | 23.78 |
| Solyc03g117810.2.1 | Tomato | cytosol | 3.04 | 22.05 |
| Solyc02g068180.2.1 | Tomato | plastid | 3.09 | 21.53 |
| Solyc03g113070.2.1 | Tomato | plasma membrane | 6.39 | 21.18 |
| Solyc03g113040.2.1 | Tomato | plastid | 10.48 | 21.16 |
| Solyc06g070950.1.1 | Tomato | plasma membrane | 9.59 | 20.54 |
| Solyc03g113060.2.1 | Tomato | extracellular | 10.06 | 20.34 |
| Solyc04g056650.2.1 | Tomato | plastid | 3.4 | 18.57 |
| Solyc06g070930.2.1 | Tomato | plastid | 1.15 | 8.03 |
Protein Annotations
| MapMan:24.1.3.2.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABCA | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006869 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 |
| GO:GO:0043231 | GO:GO:0055085 | InterPro:IPR003439 | UniProt:K4BQ98 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFAM:PF12698 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR19229 | PANTHER:PTHR19229:SF36 | SMART:SM00382 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc04g015970.2 | EnsemblPlants:Solyc04g015970.2.1 | TMHMM:TMhelix | UniParc:UPI0002766F70 | SEG:seg |
Description
ABC transporter A family member 1 [Source:Projected from Arabidopsis thaliana (AT2G41700) UniProtKB/Swiss-Prot;Acc:Q84M24]
Coordinates
chr4:+:6513493..6539312
Molecular Weight (calculated)
213129.0 Da
IEP (calculated)
7.333
GRAVY (calculated)
0.064
Length
1909 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEKKKEKEKE DMRNSRRQLK AMLRKNWLLK IRHPFVTCAE ILLPTLVMLL LIAVRSKSDI RIHPAQPYIR QGRGMFVEVG KSDTSPPFNQ VLELLLAKEE
0101: YLAFAPNTAE TRMLINVLSL KFPVLRLVTK VYEDEEELET YLRSDLYAAY DQNKNHTNPK IKGAVVFHEQ GPQLFDYSIR LNHTWAFSGF PDIRTIMDTN
0201: GPFLNDLALG VNTIPILQYG LSGFLTLQQV IDSFIIYAAQ ATMTNLQRLP SHSLDSDAQL KIPWTQYSPS DIRLAPFPTR EYTDDEFQSI VKKVMGVLYL
0301: LGFLYPISRL ISYSVLEKEL KIKEGLYMMG LKDEIFHLSW FITYAIQFAL SSVLLTVCTM STLFQYSDKT LVFVYFFTFG LSGIMLSFMI STFFTRAKTA
0401: VAVGTLTFLG AFFPYYTVND ETVSVIVKVI ASFLSPTAFA LGSINFADYE RAHVGLRWSN MWRESSGVCF LVSLLMMLLD SLLYFAIGLY LDKVLHKENG
0501: FCYPLHSLIQ KCFGRNRKNR NNSASTSEVK FTENYDEICS TDFIKDVSRP TLESMSLEMK QQESDVVLHN ISRCIQIRNL RKVYATNRGN CCAVNSLQLT
0601: LYENQILALL GHNGAGKSST IAMLVGLISP TSGDALILGK NILTDMDEIR KSLGVCPQYD ILFPELTVKE HLEIFADLKG VSEDSKEKAV TEMVDEVGLA
0701: DKLNTVVKAL SGGMKRKLSL GIALIGNSKV IILDEPTSGM DPYSMRLTWQ LIKRKKKGRI ILLTTHSMDE ADVLGDRIAI MANGSLKCCG SSIFLKHQYG
0801: VGYTLTLVKT APGASVAADI VYRHVPSATC VSEVAAEVSF KLPLASSSSF ESMFREIERC MRRSNTGFET TDCKEVGNLG IESYGISVTT LEEVFLRVAG
0901: GDFDQAELLE EKADPNLCDS IDLKVRQTNA PKTFFPSKLC GNYFGVIWFM VTLIFSACNL IWTAVSSVIR LVTMQCCCCC ILSRSTFWKH SRALFIKRAK
1001: SAQRDQKTIV FQLLIPAFFL FLGLLFLKLK PHPDQQPVFF TTSYFNPLLS GGGGGGPIPF DLTSPIAKEV ANHVHGGWIQ KYQETTYRFP DSTKALNDAI
1101: EAAGSTLGPV LLSMSEYLMS SFNESYQSRY GAIVMDNQSG DGSLGYTVLY NSTCQHSAPT FINLMNSAIL RLATQNENMT IHTRNHPLPQ TASQHQQHHD
1201: LDAFSAAVVI TIAFSFIPAS FAVAIVKERE VKAKHQQLIS GVSILSYWAS TYIWDFISFL FPSSFALVLF WIFGLDQFIG KDSLIPTILL FLEYGLAIAS
1301: STYCLTFFFS EHSMAQNVIL LIQVFTGLIL MVLSFIMGYI NSTTHLNSVL KNFFRLSPGF CFADGLASLA LLRQGMKNGS RDNILDWNVT GASLSYLAAE
1401: AIVYFLITLG LEFLPQQKRN LSRIHEWWKI LGKSRRANSF GFSEPLLRSS SGNVASEPDE DIDVKAERDR VLSGSTDNAV IHLRNLRKVY PGGKSHVPKA
1501: AVHSLTFSVQ EGECFGFLGT NGAGKTTTLS MLSGEEYPSD GTAFIFGKDI RSDPKVARRH VGYCPQFDAL LEFLTVQEHL ELYARIKGVP EYDLEDVVMQ
1601: KLLDFDLMKH ANKPSFALSG GNKRKLSVAI AMIGDPPIVI LDEPSTGMDP IAKRFMWEVI SRLSTRRGKT AVILTTHSMN EAQALCTRIG IMVGGRLRCL
1701: GSSQHLKTRF GNHLELEVKP VEVSSMDLEN LCLIIQEKLF DIRPHSRSII NDIEVCIGGS NTVVSGDASA AEISLSKEMI MAVGQWFGNE ERVKALVSAT
1801: EDSCKIFGDQ LSEQLARDGG LPLPIFCEWW LAKEKFTKIH SFIQSSFPDA TFQGCNGLSV KYQLPCGEGL SLADVFGYIE RNRNQLGIAE YNVSQSTLES
1901: IFNHLAASS
0101: YLAFAPNTAE TRMLINVLSL KFPVLRLVTK VYEDEEELET YLRSDLYAAY DQNKNHTNPK IKGAVVFHEQ GPQLFDYSIR LNHTWAFSGF PDIRTIMDTN
0201: GPFLNDLALG VNTIPILQYG LSGFLTLQQV IDSFIIYAAQ ATMTNLQRLP SHSLDSDAQL KIPWTQYSPS DIRLAPFPTR EYTDDEFQSI VKKVMGVLYL
0301: LGFLYPISRL ISYSVLEKEL KIKEGLYMMG LKDEIFHLSW FITYAIQFAL SSVLLTVCTM STLFQYSDKT LVFVYFFTFG LSGIMLSFMI STFFTRAKTA
0401: VAVGTLTFLG AFFPYYTVND ETVSVIVKVI ASFLSPTAFA LGSINFADYE RAHVGLRWSN MWRESSGVCF LVSLLMMLLD SLLYFAIGLY LDKVLHKENG
0501: FCYPLHSLIQ KCFGRNRKNR NNSASTSEVK FTENYDEICS TDFIKDVSRP TLESMSLEMK QQESDVVLHN ISRCIQIRNL RKVYATNRGN CCAVNSLQLT
0601: LYENQILALL GHNGAGKSST IAMLVGLISP TSGDALILGK NILTDMDEIR KSLGVCPQYD ILFPELTVKE HLEIFADLKG VSEDSKEKAV TEMVDEVGLA
0701: DKLNTVVKAL SGGMKRKLSL GIALIGNSKV IILDEPTSGM DPYSMRLTWQ LIKRKKKGRI ILLTTHSMDE ADVLGDRIAI MANGSLKCCG SSIFLKHQYG
0801: VGYTLTLVKT APGASVAADI VYRHVPSATC VSEVAAEVSF KLPLASSSSF ESMFREIERC MRRSNTGFET TDCKEVGNLG IESYGISVTT LEEVFLRVAG
0901: GDFDQAELLE EKADPNLCDS IDLKVRQTNA PKTFFPSKLC GNYFGVIWFM VTLIFSACNL IWTAVSSVIR LVTMQCCCCC ILSRSTFWKH SRALFIKRAK
1001: SAQRDQKTIV FQLLIPAFFL FLGLLFLKLK PHPDQQPVFF TTSYFNPLLS GGGGGGPIPF DLTSPIAKEV ANHVHGGWIQ KYQETTYRFP DSTKALNDAI
1101: EAAGSTLGPV LLSMSEYLMS SFNESYQSRY GAIVMDNQSG DGSLGYTVLY NSTCQHSAPT FINLMNSAIL RLATQNENMT IHTRNHPLPQ TASQHQQHHD
1201: LDAFSAAVVI TIAFSFIPAS FAVAIVKERE VKAKHQQLIS GVSILSYWAS TYIWDFISFL FPSSFALVLF WIFGLDQFIG KDSLIPTILL FLEYGLAIAS
1301: STYCLTFFFS EHSMAQNVIL LIQVFTGLIL MVLSFIMGYI NSTTHLNSVL KNFFRLSPGF CFADGLASLA LLRQGMKNGS RDNILDWNVT GASLSYLAAE
1401: AIVYFLITLG LEFLPQQKRN LSRIHEWWKI LGKSRRANSF GFSEPLLRSS SGNVASEPDE DIDVKAERDR VLSGSTDNAV IHLRNLRKVY PGGKSHVPKA
1501: AVHSLTFSVQ EGECFGFLGT NGAGKTTTLS MLSGEEYPSD GTAFIFGKDI RSDPKVARRH VGYCPQFDAL LEFLTVQEHL ELYARIKGVP EYDLEDVVMQ
1601: KLLDFDLMKH ANKPSFALSG GNKRKLSVAI AMIGDPPIVI LDEPSTGMDP IAKRFMWEVI SRLSTRRGKT AVILTTHSMN EAQALCTRIG IMVGGRLRCL
1701: GSSQHLKTRF GNHLELEVKP VEVSSMDLEN LCLIIQEKLF DIRPHSRSII NDIEVCIGGS NTVVSGDASA AEISLSKEMI MAVGQWFGNE ERVKALVSAT
1801: EDSCKIFGDQ LSEQLARDGG LPLPIFCEWW LAKEKFTKIH SFIQSSFPDA TFQGCNGLSV KYQLPCGEGL SLADVFGYIE RNRNQLGIAE YNVSQSTLES
1901: IFNHLAASS
0001: MGSSKRQFKA MLRKNWLLKT RHPFVTSAEI LLPTIVMLLL IAVRTRVDTT IHPAHSNIDK DTVVEVGKGN SPSFPEVLKL LLAEGDFLAF APDTDETNNM
0101: IDILSLKFPE LRLVTKIFKD DIELETYITS AHYGVCSEVR NCSNPKIKGA VVFHEQGPHL FDYSIRLNHT WAFAGFPNVK SIMDTNGPYI NDLEMGINTI
0201: PTMQYSFSGF LTLQQVVDSF IIFASQQNND LPLSHSNLSS ALRFELPWTL FSPSVIRMVP FPTREYTDDE FQSIVKSVMG LLYLLGFLFP ISRLISYSVF
0301: EKEQKIREGL YMMGLKDEIF HLSWFITYAL QFALCSGIIT ACTMGSLFKY SDKTLVFTYF FLFGLSAIML SFMISTFFTR AKTAVAVGTL TFLGAFFPYY
0401: TVNDESVSMV LKVVASLLSP TAFALGSINF ADYERAHVGL RWSNIWRASS GVSFFVCLLM MLLDSILYCA LGLYLDKVLP RENGVRYPWN FIFSKYFGRK
0501: KNNLQNRIPG FETDMFPADI EVNQGEPFDP VFESISLEMR QQELDGRCIQ VRNLHKVYAS RRGNCCAVNS LQLTLYENQI LSLLGHNGAG KSTTISMLVG
0601: LLPPTSGDAL ILGNSIITNM DEIRKELGVC PQHDILFPEL TVREHLEMFA VLKGVEEGSL KSTVVDMAEE VGLSDKINTL VRALSGGMKR KLSLGIALIG
0701: NSKVIILDEP TSGMDPYSMR LTWQLIKKIK KGRIILLTTH SMDEAEELGD RIGIMANGSL KCCGSSIFLK HHYGVGYTLT LVKTSPTVSV AAHIVHRHIP
0801: SATCVSEVGN EISFKLPLAS LPCFENMFRE IESCMKNSVD RSKISEIEDS DYPGIQSYGI SVTTLEEVFL RVAGCNLDIE DKQEDIFVSP DTKSSLVCIG
0901: SNQKSSMQPK LLASCNDGAG VIITSVAKAF RLIVAAVWTL IGFISIQCCG CSIISRSMFW RHCKALFIKR ARSACRDRKT VAFQFIIPAV FLLFGLLFLQ
1001: LKPHPDQKSI TLTTAYFNPL LSGKGGGGPI PFDLSVPIAK EVAQYIEGGW IQPLRNTSYK FPNPKEALAD AIDAAGPTLG PTLLSMSEFL MSSFDQSYQS
1101: RYGSILMDGQ HPDGSLGYTV LHNGTCQHAG PIYINVMHAA ILRLATGNKN MTIQTRNHPL PPTKTQRIQR HDLDAFSAAI IVNIAFSFIP ASFAVPIVKE
1201: REVKAKHQQL ISGVSVLSYW LSTYVWDFIS FLFPSTFAII LFYAFGLEQF IGIGRFLPTV LMLLEYGLAI ASSTYCLTFF FTEHSMAQNV ILMVHFFSGL
1301: ILMVISFVMG LIPATASANS YLKNFFRLSP GFCFSDGLAS LALLRQGMKD KSSHGVFEWN VTGASICYLG LESIFYFLVT LGLELMPVQK VMSFSIGEWW
1401: QNLKAFKQGA GSSSTEPLLK DSTGAISTDM EDDIDVQEER DRVISGLSDN TMLYLQNLRK VYPGDKHHGP KVAVQSLTFS VQAGECFGFL GTNGAGKTTT
1501: LSMLSGEETP TSGTAFIFGK DIVASPKAIR QHIGYCPQFD ALFEYLTVKE HLELYARIKG VVDHRIDNVV TEKLVEFDLL KHSHKPSFTL SGGNKRKLSV
1601: AIAMIGDPPI VILDEPSTGM DPVAKRFMWD VISRLSTRSG KTAVILTTHS MNEAQALCTR IGIMVGGRLR CIGSPQHLKT RYGNHLELEV KPNEVSNVEL
1701: ENFCQIIQQW LFNVPTQPRS LLGDLEVCIG VSDSITPDTA SASEISLSPE MVQRIAKFLG NEQRVSTLVP PLPEEDVRFD DQLSEQLFRD GGIPLPIFAE
1801: WWLTKEKFSA LDSFIQSSFP GATFKSCNGL SIKYQLPFGE GGLSLADAFG HLERNRNRLG IAEYSISQST LETIFNHFAA NS
0101: IDILSLKFPE LRLVTKIFKD DIELETYITS AHYGVCSEVR NCSNPKIKGA VVFHEQGPHL FDYSIRLNHT WAFAGFPNVK SIMDTNGPYI NDLEMGINTI
0201: PTMQYSFSGF LTLQQVVDSF IIFASQQNND LPLSHSNLSS ALRFELPWTL FSPSVIRMVP FPTREYTDDE FQSIVKSVMG LLYLLGFLFP ISRLISYSVF
0301: EKEQKIREGL YMMGLKDEIF HLSWFITYAL QFALCSGIIT ACTMGSLFKY SDKTLVFTYF FLFGLSAIML SFMISTFFTR AKTAVAVGTL TFLGAFFPYY
0401: TVNDESVSMV LKVVASLLSP TAFALGSINF ADYERAHVGL RWSNIWRASS GVSFFVCLLM MLLDSILYCA LGLYLDKVLP RENGVRYPWN FIFSKYFGRK
0501: KNNLQNRIPG FETDMFPADI EVNQGEPFDP VFESISLEMR QQELDGRCIQ VRNLHKVYAS RRGNCCAVNS LQLTLYENQI LSLLGHNGAG KSTTISMLVG
0601: LLPPTSGDAL ILGNSIITNM DEIRKELGVC PQHDILFPEL TVREHLEMFA VLKGVEEGSL KSTVVDMAEE VGLSDKINTL VRALSGGMKR KLSLGIALIG
0701: NSKVIILDEP TSGMDPYSMR LTWQLIKKIK KGRIILLTTH SMDEAEELGD RIGIMANGSL KCCGSSIFLK HHYGVGYTLT LVKTSPTVSV AAHIVHRHIP
0801: SATCVSEVGN EISFKLPLAS LPCFENMFRE IESCMKNSVD RSKISEIEDS DYPGIQSYGI SVTTLEEVFL RVAGCNLDIE DKQEDIFVSP DTKSSLVCIG
0901: SNQKSSMQPK LLASCNDGAG VIITSVAKAF RLIVAAVWTL IGFISIQCCG CSIISRSMFW RHCKALFIKR ARSACRDRKT VAFQFIIPAV FLLFGLLFLQ
1001: LKPHPDQKSI TLTTAYFNPL LSGKGGGGPI PFDLSVPIAK EVAQYIEGGW IQPLRNTSYK FPNPKEALAD AIDAAGPTLG PTLLSMSEFL MSSFDQSYQS
1101: RYGSILMDGQ HPDGSLGYTV LHNGTCQHAG PIYINVMHAA ILRLATGNKN MTIQTRNHPL PPTKTQRIQR HDLDAFSAAI IVNIAFSFIP ASFAVPIVKE
1201: REVKAKHQQL ISGVSVLSYW LSTYVWDFIS FLFPSTFAII LFYAFGLEQF IGIGRFLPTV LMLLEYGLAI ASSTYCLTFF FTEHSMAQNV ILMVHFFSGL
1301: ILMVISFVMG LIPATASANS YLKNFFRLSP GFCFSDGLAS LALLRQGMKD KSSHGVFEWN VTGASICYLG LESIFYFLVT LGLELMPVQK VMSFSIGEWW
1401: QNLKAFKQGA GSSSTEPLLK DSTGAISTDM EDDIDVQEER DRVISGLSDN TMLYLQNLRK VYPGDKHHGP KVAVQSLTFS VQAGECFGFL GTNGAGKTTT
1501: LSMLSGEETP TSGTAFIFGK DIVASPKAIR QHIGYCPQFD ALFEYLTVKE HLELYARIKG VVDHRIDNVV TEKLVEFDLL KHSHKPSFTL SGGNKRKLSV
1601: AIAMIGDPPI VILDEPSTGM DPVAKRFMWD VISRLSTRSG KTAVILTTHS MNEAQALCTR IGIMVGGRLR CIGSPQHLKT RYGNHLELEV KPNEVSNVEL
1701: ENFCQIIQQW LFNVPTQPRS LLGDLEVCIG VSDSITPDTA SASEISLSPE MVQRIAKFLG NEQRVSTLVP PLPEEDVRFD DQLSEQLFRD GGIPLPIFAE
1801: WWLTKEKFSA LDSFIQSSFP GATFKSCNGL SIKYQLPFGE GGLSLADAFG HLERNRNRLG IAEYSISQST LETIFNHFAA NS
Arabidopsis Description
ABCA1ABC transporter A family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q84M24]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.