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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27227 Canola mitochondrion, plastid 98.28 97.16
CDY32010 Canola plastid 90.23 90.23
AT3G56290.1 Thale cress plastid 84.48 84.97
Os01t0823600-01 Rice plastid 63.79 65.29
KRH64197 Soybean plastid 63.22 64.71
Zm00001d043045_P001 Maize plastid 59.77 64.2
VIT_13s0067g02560.t01 Wine grape plastid 64.37 63.64
EES01674 Sorghum plastid 59.2 63.19
KRH53741 Soybean nucleus, plastid 62.07 63.16
TraesCS3B01G377300.1 Wheat plastid 61.49 61.85
GSMUA_AchrUn_... Banana plastid 63.22 61.8
TraesCS3D01G339300.1 Wheat plastid 60.92 61.63
PGSC0003DMT400062463 Potato nucleus 63.22 61.45
TraesCS3A01G345200.1 Wheat plastid 60.34 60.69
HORVU3Hr1G081280.1 Barley cytosol, plastid 40.23 51.85
KRH75220 Soybean nucleus, plastid 31.61 50.0
Protein Annotations
EnsemblPlants:CDX72149EnsemblPlantsGene:GSBRNA2T00155973001PANTHER:PTHR36771ProteinID:CDX72149ProteinID:CDX72149.1SEG:seg
UniParc:UPI0004EE7191MapMan:35.2::::
Description
BnaC08g27250D
Coordinates
chrLK031795:+:2687396..2688370
Molecular Weight (calculated)
19799.6 Da
IEP (calculated)
9.953
GRAVY (calculated)
-0.785
Length
174 amino acids
Sequence
(BLAST)
001: MGLRALPLQH SGGFVATTKV PISRTLPRIS QKPRWVVVSA KQEKDEEKKK EDETSLFTRL TDALDFAQVR SEKDAELLYE AREATKSGGK MNKEQYGALR
101: RKIGGTYKDF FKSYVEVDGE YVEEGWVDKT CKVCKKDTKG EARQVDKLGR YVHVSCLQNP SKPSGNLFTR LFSR
Best Arabidopsis Sequence Match ( AT3G56290.1 )
(BLAST)
001: MGFRALPLQH SSGFISTTKV SISRTSPRIF RNPRWVVVSA KQEKDEDKKK NEEETSLFTQ LTDALDFSQV RSEKDAELLY EAREATKSGR KMTQEQYGAL
101: RRKIGGTYKD FFKSYVEVDG QYVEEGWVDK TCKICKKDTK GEARQVDKLG RYAHVSCLQN PPSGNFFTRL FSR
Arabidopsis Description
Potassium transporter [Source:UniProtKB/TrEMBL;Acc:Q9LYL4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.