CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 6
mitochondrion 5
cytosol 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007234.1-P	Field mustard	mitochondrion, plastid	100.0	100.0
CDX72149	Canola	mitochondrion, plastid	97.16	98.28
CDY32010	Canola	plastid	88.64	89.66
AT3G56290.1	Thale cress	plastid	82.95	84.39
Os01t0823600-01	Rice	plastid	63.64	65.88
Zm00001d043045_P001	Maize	plastid	60.23	65.43
EES01674	Sorghum	plastid	59.66	64.42
VIT_13s0067g02560.t01	Wine grape	plastid	64.2	64.2
KRH64197	Soybean	plastid	61.93	64.12
TraesCS3D01G339300.1	Wheat	plastid	61.36	62.79
KRH53741	Soybean	nucleus, plastid	60.8	62.57
TraesCS3B01G377300.1	Wheat	plastid	61.36	62.43
TraesCS3A01G345200.1	Wheat	plastid	60.8	61.85
PGSC0003DMT400062463	Potato	nucleus	62.5	61.45
GSMUA_AchrUn_...	Banana	plastid	61.93	61.24
HORVU3Hr1G081280.1	Barley	cytosol, plastid	39.77	51.85
KRH75220	Soybean	nucleus, plastid	31.25	50.0

Protein Annotations

EnsemblPlants:CDY27227	EnsemblPlantsGene:GSBRNA2T00037101001	PANTHER:PTHR36771	ProteinID:CDY27227	ProteinID:CDY27227.1	SEG:seg
UniParc:UPI0002542B7F	UniProt:A0A078GPV3	MapMan:35.2	:	:	:

Description

BnaA09g35750DBnaA09g35750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPV3]

Coordinates

chrLK032201:+:241319..242310

Molecular Weight (calculated)

20117.9 Da

IEP (calculated)

9.708

GRAVY (calculated)

-0.795

Length

176 amino acids

Sequence
(BLAST)

001: MGLRALPLQH SGGFVATTKV PISRTLPRIS QKPRWVVVSA KQEKDEEKKK EDETSLFTRL TDALDFAQVR SEKDAELLYE AREATKSGGK MNKEQYGALR
101: RKIGGTYKDF FKSYVEVDGE YVEEGWVDKT CKVCKKDTRG EARQVDKLGR YVHVSCLQNP SKPSGNFFTR LFIRDD

Best Arabidopsis Sequence Match ( AT3G56290.1 )
(BLAST)

001: MGFRALPLQH SSGFISTTKV SISRTSPRIF RNPRWVVVSA KQEKDEDKKK NEEETSLFTQ LTDALDFSQV RSEKDAELLY EAREATKSGR KMTQEQYGAL
101: RRKIGGTYKD FFKSYVEVDG QYVEEGWVDK TCKICKKDTK GEARQVDKLG RYAHVSCLQN PPSGNFFTRL FSR

Arabidopsis Description

Potassium transporter [Source:UniProtKB/TrEMBL;Acc:Q9LYL4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.