Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17236 | Canola | cytosol | 94.49 | 94.49 |
| Bra005436.1-P | Field mustard | cytosol | 93.7 | 93.7 |
| AT2G34340.1 | Thale cress | nucleus | 68.5 | 63.97 |
| KRH13257 | Soybean | mitochondrion | 22.83 | 59.18 |
| CDY72186 | Canola | cytosol | 63.78 | 57.04 |
| CDY43682 | Canola | cytosol | 62.99 | 56.34 |
| CDX99846 | Canola | cytosol | 56.69 | 52.17 |
| CDY26321 | Canola | nucleus | 56.69 | 52.17 |
| CDY68974 | Canola | nucleus | 54.33 | 50.74 |
| CDX94684 | Canola | cytosol | 53.54 | 50.0 |
| CDX94683 | Canola | cytosol | 52.76 | 49.26 |
| CDX90198 | Canola | cytosol | 52.76 | 47.86 |
| CDY35299 | Canola | nucleus | 51.18 | 47.45 |
| GSMUA_Achr6P26140_001 | Banana | cytosol | 36.22 | 45.1 |
| CDX98601 | Canola | cytosol | 38.58 | 44.95 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.37 | 44.25 |
| CDX99403 | Canola | nucleus | 38.58 | 44.14 |
| CDX78911 | Canola | nucleus | 36.22 | 43.81 |
| CDY01576 | Canola | nucleus | 37.01 | 42.73 |
| CDX76503 | Canola | nucleus | 35.43 | 40.91 |
| KRH21137 | Soybean | cytosol | 37.8 | 40.68 |
| GSMUA_Achr4P15500_001 | Banana | cytosol | 37.01 | 40.52 |
| CDY72609 | Canola | cytosol | 36.22 | 40.35 |
| CDY09268 | Canola | nucleus | 34.65 | 40.0 |
| Zm00001d011752_P001 | Maize | cytosol | 28.35 | 40.0 |
| GSMUA_Achr7P24930_001 | Banana | plastid | 31.5 | 40.0 |
| GSMUA_Achr3P31830_001 | Banana | nucleus | 37.01 | 39.83 |
| Os01t0727700-00 | Rice | cytosol | 33.86 | 39.45 |
| Zm00001d043586_P001 | Maize | cytosol, plastid | 29.13 | 39.36 |
| GSMUA_Achr2P09490_001 | Banana | cytosol | 35.43 | 37.5 |
| KRH71505 | Soybean | cytosol | 29.13 | 37.37 |
| TraesCS3D01G283600.1 | Wheat | cytosol, plastid | 28.35 | 37.11 |
| GSMUA_Achr9P05760_001 | Banana | nucleus | 36.22 | 37.1 |
| GSMUA_Achr9P05750_001 | Banana | cytosol | 33.86 | 35.83 |
| GSMUA_Achr1P11590_001 | Banana | cytosol | 31.5 | 34.78 |
| GSMUA_Achr7P24940_001 | Banana | cytosol | 32.28 | 33.88 |
| PGSC0003DMT400035020 | Potato | nucleus | 37.01 | 33.57 |
| Zm00001d010814_P001 | Maize | cytosol | 36.22 | 33.33 |
| TraesCS1A01G351000.1 | Wheat | nucleus | 35.43 | 33.09 |
| Solyc03g005890.1.1 | Tomato | nucleus | 35.43 | 32.61 |
| PGSC0003DMT400035019 | Potato | nucleus | 35.43 | 32.14 |
| Os05t0531100-01 | Rice | nucleus | 34.65 | 30.99 |
| TraesCS1B01G365200.1 | Wheat | nucleus | 33.86 | 30.94 |
| Os05t0518800-00 | Rice | cytosol, mitochondrion, nucleus | 30.71 | 30.0 |
| TraesCS1B01G351400.1 | Wheat | cytosol | 31.5 | 29.41 |
| KRH11111 | Soybean | nucleus | 39.37 | 28.9 |
| Zm00001d043455_P001 | Maize | cytosol | 33.86 | 28.67 |
| HORVU1Hr1G076310.1 | Barley | nucleus | 33.86 | 28.29 |
| EES18553 | Sorghum | cytosol | 36.22 | 28.22 |
| TraesCS1A01G339100.1 | Wheat | cytosol | 32.28 | 27.52 |
| KXG33366 | Sorghum | cytosol | 31.5 | 27.21 |
| Os01t0748300-00 | Rice | cytosol | 32.28 | 26.45 |
| Zm00001d038814_P001 | Maize | cytosol, nucleus, plastid | 28.35 | 24.0 |
| KXG22361 | Sorghum | nucleus | 29.92 | 23.17 |
Protein Annotations
| EnsemblPlants:CDX84328 | EnsemblPlantsGene:GSBRNA2T00141442001 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF7 | PFAM:PF04520 |
| ProteinID:CDX84328 | ProteinID:CDX84328.1 | UniParc:UPI0004EAB5A0 | MapMan:35.2 | : | : |
Description
BnaC04g10900D
Coordinates
chrLK031836:+:1847337..1847720
Molecular Weight (calculated)
14362.1 Da
IEP (calculated)
7.521
GRAVY (calculated)
-0.615
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEFDESEV LFSQDFSFKR DDGNENHMFG VKEMKKTSRI INRTELSRSL PVNVPENMFR RRYVGKEEDE YSGGGGEIVP PHVIVGRRIQ GGEMAFSVCT
101: GTGRTLKGRD LSRVRNSVLK LTGFLEA
101: GTGRTLKGRD LSRVRNSVLK LTGFLEA
001: MAEEFDESEV VFSDGLSSVL HKENENRLFG SDMERKKTRR IKRTTTEKAS LSSSLPVSIP ENIFRRYVGK EEDEYSEEEY SEGGGEMIPP HIMIGRRIQG
101: GQMAFSVCSG SGRTLKGRDL SRVRNSVLRL TGFLEA
101: GQMAFSVCSG SGRTLKGRDL SRVRNSVLRL TGFLEA
Arabidopsis Description
At2g34340 [Source:UniProtKB/TrEMBL;Acc:O80783]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.