Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G29640.1 | EES07517 | AT3G48150.1 | 21798944 |
| AT1G29640.1 | EES05709 | AT4G17680.1 | 21798944 |
| AT1G29640.1 | KXG38894 | AT4G17680.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010814_P001 | Maize | cytosol | 43.56 | 51.45 |
| Os05t0531100-01 | Rice | nucleus | 41.72 | 47.89 |
| KRH13257 | Soybean | mitochondrion | 13.5 | 44.9 |
| TraesCS1A01G351000.1 | Wheat | nucleus | 37.42 | 44.85 |
| GSMUA_Achr7P24930_001 | Banana | plastid | 26.38 | 43.0 |
| TraesCS1B01G365200.1 | Wheat | nucleus | 36.2 | 42.45 |
| GSMUA_Achr3P31830_001 | Banana | nucleus | 30.67 | 42.37 |
| TraesCS3D01G283600.1 | Wheat | cytosol, plastid | 23.31 | 39.18 |
| CDX84328 | Canola | cytosol | 28.22 | 36.22 |
| CDX78911 | Canola | nucleus | 23.31 | 36.19 |
| GSMUA_Achr9P05750_001 | Banana | cytosol | 26.38 | 35.83 |
| Bra013366.1-P | Field mustard | nucleus | 25.15 | 35.65 |
| CDX99403 | Canola | nucleus | 23.93 | 35.14 |
| AT4G18980.1 | Thale cress | cytosol | 22.7 | 34.91 |
| KXG33366 | Sorghum | cytosol | 31.29 | 34.69 |
| CDY17236 | Canola | cytosol | 26.38 | 33.86 |
| Bra005436.1-P | Field mustard | cytosol | 26.38 | 33.86 |
| AT5G45630.1 | Thale cress | nucleus | 23.31 | 33.33 |
| Bra030154.1-P | Field mustard | nucleus | 27.61 | 33.09 |
| CDY68974 | Canola | nucleus | 27.61 | 33.09 |
| CDY72609 | Canola | cytosol | 22.7 | 32.46 |
| CDY72186 | Canola | cytosol | 28.22 | 32.39 |
| CDY43682 | Canola | cytosol | 28.22 | 32.39 |
| CDX94683 | Canola | cytosol | 26.99 | 32.35 |
| CDX94684 | Canola | cytosol | 26.99 | 32.35 |
| KRH21137 | Soybean | cytosol | 23.31 | 32.2 |
| CDX90198 | Canola | cytosol | 27.61 | 32.14 |
| Bra012560.1-P | Field mustard | cytosol | 21.47 | 32.11 |
| CDX98601 | Canola | cytosol | 21.47 | 32.11 |
| AT2G34340.1 | Thale cress | nucleus | 26.38 | 31.62 |
| Bra017599.1-P | Field mustard | cytosol | 22.09 | 31.58 |
| KRH71505 | Soybean | cytosol | 19.02 | 31.31 |
| CDY26321 | Canola | nucleus | 26.38 | 31.16 |
| CDX99846 | Canola | cytosol | 26.38 | 31.16 |
| KXG22361 | Sorghum | nucleus | 31.29 | 31.1 |
| CDY35299 | Canola | nucleus | 25.77 | 30.66 |
| AT1G29640.1 | Thale cress | cytosol | 25.77 | 30.0 |
| PGSC0003DMT400035020 | Potato | nucleus | 25.77 | 30.0 |
| CDY01576 | Canola | nucleus | 20.25 | 30.0 |
| Bra010823.1-P | Field mustard | nucleus | 25.15 | 29.93 |
| PGSC0003DMT400035019 | Potato | nucleus | 25.15 | 29.29 |
| Bra020981.1-P | Field mustard | nucleus | 19.63 | 29.09 |
| CDY09268 | Canola | nucleus | 19.63 | 29.09 |
| CDX76503 | Canola | nucleus | 19.63 | 29.09 |
| Solyc03g005890.1.1 | Tomato | nucleus | 22.7 | 26.81 |
| KRH11111 | Soybean | nucleus | 22.09 | 20.81 |
| Bra032329.1-P | Field mustard | nucleus | 23.93 | 18.93 |
| Bra021903.1-P | Field mustard | nucleus | 19.02 | 14.29 |
Protein Annotations
| EnsemblPlants:EES18553 | EnsemblPlantsGene:SORBI_3009G208500 | EntrezGene:8085898 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF19 |
| PFAM:PF04520 | ProteinID:EES18553 | ProteinID:EES18553.1 | RefSeq:XP_002440123.1 | SEG:seg | UniParc:UPI0001A88C64 |
| UniProt:C5Z1H8 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:55574821..55575312
Molecular Weight (calculated)
17813.8 Da
IEP (calculated)
6.784
GRAVY (calculated)
-0.817
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEFQEAEIL WPAGGSDDRG NSQGDVVDDG GETEPIPCSV RPKAAAPPRS AATAPVEISR RKRRCRPWRA SEHYTSTTTP DQETDVGDDD KEEGHRSGEA
101: KGSTTDGLVI VPPHVLVARR RLVVRGRTAA AYSMCAGKGR TLKGRDLRDV RNQVLKMTGF IEE
101: KGSTTDGLVI VPPHVLVARR RLVVRGRTAA AYSMCAGKGR TLKGRDLRDV RNQVLKMTGF IEE
001: MSEEFDESEI IFSDNYFPIR RREDGNEKEN NRPVDFRENS ERVWNKSSRR SKTTPLPSAV TAFSSSLPVN IPMRRYSTEE EYSDDDGGRK MIPPHLIVGR
101: RMEGGQMAFS VCTGNGRTLK GRDLSRVRNS VLKLTGFLEA
101: RMEGGQMAFS VCTGNGRTLK GRDLSRVRNS VLKLTGFLEA
Arabidopsis Description
At1g29640 [Source:UniProtKB/TrEMBL;Acc:Q9C7N7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.