Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72186 | Canola | cytosol | 51.15 | 78.17 |
| CDY43682 | Canola | cytosol | 50.69 | 77.46 |
| Bra005436.1-P | Field mustard | cytosol | 26.73 | 45.67 |
| KRH13257 | Soybean | mitochondrion | 7.83 | 34.69 |
| Bra030154.1-P | Field mustard | nucleus | 21.66 | 34.56 |
| KRH21137 | Soybean | cytosol | 17.97 | 33.05 |
| Bra010823.1-P | Field mustard | nucleus | 20.74 | 32.85 |
| Bra012560.1-P | Field mustard | cytosol | 15.67 | 31.19 |
| Bra020981.1-P | Field mustard | nucleus | 14.75 | 29.09 |
| Bra017599.1-P | Field mustard | cytosol | 15.21 | 28.95 |
| Zm00001d043586_P001 | Maize | cytosol, plastid | 12.44 | 28.72 |
| PGSC0003DMT400035020 | Potato | nucleus | 18.43 | 28.57 |
| KRH71505 | Soybean | cytosol | 12.9 | 28.28 |
| Solyc03g005890.1.1 | Tomato | nucleus | 17.97 | 28.26 |
| Bra013366.1-P | Field mustard | nucleus | 14.75 | 27.83 |
| PGSC0003DMT400035019 | Potato | nucleus | 17.51 | 27.14 |
| GSMUA_Achr6P26140_001 | Banana | cytosol | 12.44 | 26.47 |
| GSMUA_Achr4P15500_001 | Banana | cytosol | 13.82 | 25.86 |
| TraesCS3D01G283600.1 | Wheat | cytosol, plastid | 11.52 | 25.77 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.36 | 25.66 |
| GSMUA_Achr3P31830_001 | Banana | nucleus | 13.82 | 25.42 |
| Bra032329.1-P | Field mustard | nucleus | 23.96 | 25.24 |
| GSMUA_Achr2P09490_001 | Banana | cytosol | 13.82 | 25.0 |
| Os01t0727700-00 | Rice | cytosol | 12.44 | 24.77 |
| GSMUA_Achr1P11590_001 | Banana | cytosol | 12.9 | 24.35 |
| GSMUA_Achr9P05750_001 | Banana | cytosol | 12.9 | 23.33 |
| GSMUA_Achr7P24930_001 | Banana | plastid | 10.6 | 23.0 |
| GSMUA_Achr9P05760_001 | Banana | nucleus | 12.9 | 22.58 |
| KRH11111 | Soybean | nucleus | 17.97 | 22.54 |
| GSMUA_Achr7P24940_001 | Banana | cytosol | 12.44 | 22.31 |
| Os05t0518800-00 | Rice | cytosol, mitochondrion, nucleus | 13.36 | 22.31 |
| Zm00001d011752_P001 | Maize | cytosol | 9.22 | 22.22 |
| TraesCS1A01G351000.1 | Wheat | nucleus | 13.36 | 21.32 |
| Os05t0531100-01 | Rice | nucleus | 13.36 | 20.42 |
| Zm00001d010814_P001 | Maize | cytosol | 12.9 | 20.29 |
| TraesCS1B01G365200.1 | Wheat | nucleus | 12.9 | 20.14 |
| TraesCS1B01G351400.1 | Wheat | cytosol | 12.44 | 19.85 |
| TraesCS1A01G339100.1 | Wheat | cytosol | 13.36 | 19.46 |
| HORVU1Hr1G076310.1 | Barley | nucleus | 13.36 | 19.08 |
| EES18553 | Sorghum | cytosol | 14.29 | 19.02 |
| Os01t0748300-00 | Rice | cytosol | 13.36 | 18.71 |
| KXG33366 | Sorghum | cytosol | 12.44 | 18.37 |
| Zm00001d043455_P001 | Maize | cytosol | 12.44 | 18.0 |
| KXG22361 | Sorghum | nucleus | 10.6 | 14.02 |
| Zm00001d038814_P001 | Maize | cytosol, nucleus, plastid | 9.68 | 14.0 |
Protein Annotations
| EnsemblPlants:Bra021903.1 | EnsemblPlants:Bra021903.1-P | EnsemblPlantsGene:Bra021903 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF7 |
| PFAM:PF04520 | SEG:seg | UniParc:UPI00025438BF | UniProt:M4DZF6 | MapMan:35.2 | : |
Description
AT2G34340 (E=6e-023) | unknown protein
Coordinates
chrA04:-:15132534..15135311
Molecular Weight (calculated)
24479.9 Da
IEP (calculated)
5.669
GRAVY (calculated)
-0.351
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEFDEAEV VFSEDLSSVF QREDEDENHL FGLKESNKSR RIVKRKKKVM ALSSSLPVNI PENMFRRHVE KEEGEHSEEE EYSNGRGEIV PPHVIVGRRI
101: QGEGGGQMAF SVCSELNFTV NTLCHGFISF ELLPLRTSFV LSKEFSYNNG GAAKNWPEEN GSSCIKLLTG LCELICLSCS HPSVGFSRSS VGFSRRFLWA
201: FGSGAISFCR QLVYEYR
101: QGEGGGQMAF SVCSELNFTV NTLCHGFISF ELLPLRTSFV LSKEFSYNNG GAAKNWPEEN GSSCIKLLTG LCELICLSCS HPSVGFSRSS VGFSRRFLWA
201: FGSGAISFCR QLVYEYR
001: MAEEFDESEV VFSDGLSSVL HKENENRLFG SDMERKKTRR IKRTTTEKAS LSSSLPVSIP ENIFRRYVGK EEDEYSEEEY SEGGGEMIPP HIMIGRRIQG
101: GQMAFSVCSG SGRTLKGRDL SRVRNSVLRL TGFLEA
101: GQMAFSVCSG SGRTLKGRDL SRVRNSVLRL TGFLEA
Arabidopsis Description
At2g34340 [Source:UniProtKB/TrEMBL;Acc:O80783]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.