Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72609 | Canola | cytosol | 99.12 | 99.12 |
| AT5G45630.1 | Thale cress | nucleus | 65.79 | 65.79 |
| Bra020981.1-P | Field mustard | nucleus | 48.25 | 50.0 |
| Bra013366.1-P | Field mustard | nucleus | 46.49 | 46.09 |
| Bra012560.1-P | Field mustard | cytosol | 43.86 | 45.87 |
| Zm00001d011752_P001 | Maize | cytosol | 31.58 | 40.0 |
| Zm00001d043586_P001 | Maize | cytosol, plastid | 32.46 | 39.36 |
| Bra030154.1-P | Field mustard | nucleus | 45.61 | 38.24 |
| TraesCS3D01G283600.1 | Wheat | cytosol, plastid | 32.46 | 38.14 |
| GSMUA_Achr4P15500_001 | Banana | cytosol | 38.6 | 37.93 |
| GSMUA_Achr6P26140_001 | Banana | cytosol | 33.33 | 37.25 |
| Bra005436.1-P | Field mustard | cytosol | 40.35 | 36.22 |
| GSMUA_Achr7P24930_001 | Banana | plastid | 30.7 | 35.0 |
| Os01t0727700-00 | Rice | cytosol | 32.46 | 33.95 |
| GSMUA_Achr9P05750_001 | Banana | cytosol | 35.09 | 33.33 |
| GSMUA_Achr1P11590_001 | Banana | cytosol | 33.33 | 33.04 |
| GSMUA_Achr3P31830_001 | Banana | nucleus | 33.33 | 32.2 |
| GSMUA_Achr9P05760_001 | Banana | nucleus | 34.21 | 31.45 |
| GSMUA_Achr7P24940_001 | Banana | cytosol | 33.33 | 31.41 |
| Bra010823.1-P | Field mustard | nucleus | 36.84 | 30.66 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.82 | 30.09 |
| GSMUA_Achr2P09490_001 | Banana | cytosol | 30.7 | 29.17 |
| Os05t0518800-00 | Rice | cytosol, mitochondrion, nucleus | 32.46 | 28.46 |
| Zm00001d010814_P001 | Maize | cytosol | 31.58 | 26.09 |
| TraesCS1B01G351400.1 | Wheat | cytosol | 30.7 | 25.74 |
| Os05t0531100-01 | Rice | nucleus | 31.58 | 25.35 |
| TraesCS1A01G351000.1 | Wheat | nucleus | 28.95 | 24.26 |
| TraesCS1A01G339100.1 | Wheat | cytosol | 31.58 | 24.16 |
| TraesCS1B01G365200.1 | Wheat | nucleus | 28.95 | 23.74 |
| HORVU1Hr1G076310.1 | Barley | nucleus | 31.58 | 23.68 |
| Zm00001d038814_P001 | Maize | cytosol, nucleus, plastid | 30.7 | 23.33 |
| KXG33366 | Sorghum | cytosol | 29.82 | 23.13 |
| Bra032329.1-P | Field mustard | nucleus | 41.23 | 22.82 |
| Zm00001d043455_P001 | Maize | cytosol | 29.82 | 22.67 |
| Os01t0748300-00 | Rice | cytosol | 30.7 | 22.58 |
| EES18553 | Sorghum | cytosol | 31.58 | 22.09 |
| KXG22361 | Sorghum | nucleus | 28.07 | 19.51 |
| Bra021903.1-P | Field mustard | nucleus | 28.95 | 15.21 |
Protein Annotations
| EnsemblPlants:Bra017599.1 | EnsemblPlants:Bra017599.1-P | EnsemblPlantsGene:Bra017599 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF7 |
| PFAM:PF04520 | SEG:seg | UniParc:UPI000254259E | UniProt:M4DM67 | MapMan:35.2 | : |
Description
AT5G45630 (E=1e-035) | unknown protein
Coordinates
chrA09:+:16821370..16821714
Molecular Weight (calculated)
13291.5 Da
IEP (calculated)
4.871
GRAVY (calculated)
-0.965
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEEYEESDI IFSEQATIQE CNQKTRFSNI RNDEKGTRQR VAAEKTSPMS IPVNNFGRTE WETTEEEEED KTPPHVIVER RLKEQIAFSV CALKGRDLNR
101: HRNSVLRMTG FLEA
101: HRNSVLRMTG FLEA
001: MSEEFQESDI IFSDQSKIST SSRYTKLYNS RNDEKKGTRR HETAEKTSPV RIPTNNFRCL EWDTTEEEDD KTPPHVIIER RMKEQIAFSA CTLKGRDLSR
101: HRNSVLRMTG FLEA
101: HRNSVLRMTG FLEA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FK78]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.