Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72609 | Canola | cytosol | 66.67 | 66.67 |
| Bra017599.1-P | Field mustard | cytosol | 65.79 | 65.79 |
| AT4G18980.1 | Thale cress | cytosol | 52.63 | 56.6 |
| GSMUA_Achr6P26140_001 | Banana | cytosol | 37.72 | 42.16 |
| Zm00001d011752_P001 | Maize | cytosol | 29.82 | 37.78 |
| AT1G29640.1 | Thale cress | cytosol | 45.61 | 37.14 |
| TraesCS3D01G283600.1 | Wheat | cytosol, plastid | 31.58 | 37.11 |
| GSMUA_Achr4P15500_001 | Banana | cytosol | 37.72 | 37.07 |
| GSMUA_Achr7P24930_001 | Banana | plastid | 32.46 | 37.0 |
| Zm00001d043586_P001 | Maize | cytosol, plastid | 29.82 | 36.17 |
| AT2G34340.1 | Thale cress | nucleus | 42.11 | 35.29 |
| GSMUA_Achr1P11590_001 | Banana | cytosol | 34.21 | 33.91 |
| GSMUA_Achr9P05760_001 | Banana | nucleus | 35.09 | 32.26 |
| Os01t0727700-00 | Rice | cytosol | 30.7 | 32.11 |
| GSMUA_Achr9P05750_001 | Banana | cytosol | 33.33 | 31.67 |
| GSMUA_Achr2P09490_001 | Banana | cytosol | 33.33 | 31.67 |
| GSMUA_Achr3P31830_001 | Banana | nucleus | 32.46 | 31.36 |
| GSMUA_Achr7P24940_001 | Banana | cytosol | 32.46 | 30.58 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.82 | 30.09 |
| Os05t0518800-00 | Rice | cytosol, mitochondrion, nucleus | 32.46 | 28.46 |
| TraesCS1B01G365200.1 | Wheat | nucleus | 32.46 | 26.62 |
| TraesCS1A01G351000.1 | Wheat | nucleus | 31.58 | 26.47 |
| Zm00001d010814_P001 | Maize | cytosol | 30.7 | 25.36 |
| Os05t0531100-01 | Rice | nucleus | 29.82 | 23.94 |
| KXG33366 | Sorghum | cytosol | 30.7 | 23.81 |
| TraesCS1B01G351400.1 | Wheat | cytosol | 28.07 | 23.53 |
| Zm00001d038814_P001 | Maize | cytosol, nucleus, plastid | 30.7 | 23.33 |
| Zm00001d043455_P001 | Maize | cytosol | 30.7 | 23.33 |
| EES18553 | Sorghum | cytosol | 33.33 | 23.31 |
| Os01t0748300-00 | Rice | cytosol | 31.58 | 23.23 |
| TraesCS1A01G339100.1 | Wheat | cytosol | 29.82 | 22.82 |
| HORVU1Hr1G076310.1 | Barley | nucleus | 28.07 | 21.05 |
| KXG22361 | Sorghum | nucleus | 28.95 | 20.12 |
Protein Annotations
| MapMan:35.2 | EntrezGene:834603 | UniProt:A0A178UNK0 | ProteinID:AED95278.1 | ArrayExpress:AT5G45630 | EnsemblPlantsGene:AT5G45630 |
| RefSeq:AT5G45630 | TAIR:AT5G45630 | RefSeq:AT5G45630-TAIR-G | EnsemblPlants:AT5G45630.1 | TAIR:AT5G45630.1 | ProteinID:BAB09206.1 |
| RefSeq:NP_199376.1 | ProteinID:OAO95409.1 | PFAM:PF04520 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33083 |
| PANTHER:PTHR33083:SF7 | UniProt:Q9FK78 | InterPro:Senescence_reg_S40 | UniParc:UPI00000AB285 | SEG:seg | : |
Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FK78]
Coordinates
chr5:-:18505536..18506382
Molecular Weight (calculated)
13386.6 Da
IEP (calculated)
7.513
GRAVY (calculated)
-1.074
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEEFQESDI IFSDQSKIST SSRYTKLYNS RNDEKKGTRR HETAEKTSPV RIPTNNFRCL EWDTTEEEDD KTPPHVIIER RMKEQIAFSA CTLKGRDLSR
101: HRNSVLRMTG FLEA
101: HRNSVLRMTG FLEA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.