Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017599.1-P | Field mustard | cytosol | 99.12 | 99.12 |
| AT5G45630.1 | Thale cress | nucleus | 66.67 | 66.67 |
| CDX76503 | Canola | nucleus | 48.25 | 50.0 |
| CDY09268 | Canola | nucleus | 47.37 | 49.09 |
| CDX78911 | Canola | nucleus | 42.98 | 46.67 |
| CDX99403 | Canola | nucleus | 44.74 | 45.95 |
| CDX98601 | Canola | cytosol | 43.86 | 45.87 |
| CDY01576 | Canola | nucleus | 42.11 | 43.64 |
| Zm00001d011752_P001 | Maize | cytosol | 31.58 | 40.0 |
| Zm00001d043586_P001 | Maize | cytosol, plastid | 32.46 | 39.36 |
| CDY68974 | Canola | nucleus | 45.61 | 38.24 |
| TraesCS3D01G283600.1 | Wheat | cytosol, plastid | 32.46 | 38.14 |
| GSMUA_Achr4P15500_001 | Banana | cytosol | 38.6 | 37.93 |
| CDY26321 | Canola | nucleus | 45.61 | 37.68 |
| CDX94684 | Canola | cytosol | 44.74 | 37.5 |
| GSMUA_Achr6P26140_001 | Banana | cytosol | 33.33 | 37.25 |
| CDY17236 | Canola | cytosol | 41.23 | 37.01 |
| CDX99846 | Canola | cytosol | 44.74 | 36.96 |
| CDX94683 | Canola | cytosol | 43.86 | 36.76 |
| CDX84328 | Canola | cytosol | 40.35 | 36.22 |
| CDY43682 | Canola | cytosol | 44.74 | 35.92 |
| CDY72186 | Canola | cytosol | 44.74 | 35.92 |
| CDY35299 | Canola | nucleus | 42.98 | 35.77 |
| GSMUA_Achr7P24930_001 | Banana | plastid | 30.7 | 35.0 |
| CDX90198 | Canola | cytosol | 42.11 | 34.29 |
| Os01t0727700-00 | Rice | cytosol | 32.46 | 33.95 |
| GSMUA_Achr9P05750_001 | Banana | cytosol | 35.09 | 33.33 |
| GSMUA_Achr1P11590_001 | Banana | cytosol | 33.33 | 33.04 |
| GSMUA_Achr3P31830_001 | Banana | nucleus | 33.33 | 32.2 |
| GSMUA_Achr9P05760_001 | Banana | nucleus | 34.21 | 31.45 |
| GSMUA_Achr7P24940_001 | Banana | cytosol | 33.33 | 31.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.82 | 30.09 |
| GSMUA_Achr2P09490_001 | Banana | cytosol | 30.7 | 29.17 |
| Os05t0518800-00 | Rice | cytosol, mitochondrion, nucleus | 32.46 | 28.46 |
| Zm00001d010814_P001 | Maize | cytosol | 31.58 | 26.09 |
| TraesCS1B01G351400.1 | Wheat | cytosol | 30.7 | 25.74 |
| Os05t0531100-01 | Rice | nucleus | 31.58 | 25.35 |
| TraesCS1A01G351000.1 | Wheat | nucleus | 29.82 | 25.0 |
| TraesCS1B01G365200.1 | Wheat | nucleus | 29.82 | 24.46 |
| TraesCS1A01G339100.1 | Wheat | cytosol | 31.58 | 24.16 |
| HORVU1Hr1G076310.1 | Barley | nucleus | 31.58 | 23.68 |
| Zm00001d038814_P001 | Maize | cytosol, nucleus, plastid | 30.7 | 23.33 |
| Zm00001d043455_P001 | Maize | cytosol | 30.7 | 23.33 |
| KXG33366 | Sorghum | cytosol | 29.82 | 23.13 |
| EES18553 | Sorghum | cytosol | 32.46 | 22.7 |
| Os01t0748300-00 | Rice | cytosol | 30.7 | 22.58 |
| KXG22361 | Sorghum | nucleus | 28.07 | 19.51 |
Protein Annotations
| EnsemblPlants:CDY72609 | EnsemblPlantsGene:GSBRNA2T00033930001 | InterPro:Senescence_reg_S40 | ncoils:Coil | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF7 |
| PFAM:PF04520 | ProteinID:CDY72609 | ProteinID:CDY72609.1 | SEG:seg | UniParc:UPI0004EEE16B | UniProt:A0A078K105 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaAnng41640DBnaAnng41640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K105]
Coordinates
chrLK052227:-:105..449
Molecular Weight (calculated)
13390.6 Da
IEP (calculated)
5.060
GRAVY (calculated)
-1.001
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEEYEESDI IFSEQATIQE CNQKTRFSNI RNDEKGTRQR VAAEKTSPMS IPVNNFRRTE WETTEEEEED KTPPHVIVER RLKEQIAFSV CALKGRDLNR
101: HRNSVLRMTG FLEA
101: HRNSVLRMTG FLEA
001: MSEEFQESDI IFSDQSKIST SSRYTKLYNS RNDEKKGTRR HETAEKTSPV RIPTNNFRCL EWDTTEEEDD KTPPHVIIER RMKEQIAFSA CTLKGRDLSR
101: HRNSVLRMTG FLEA
101: HRNSVLRMTG FLEA
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9FK78]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.