Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72186 | Canola | cytosol | 99.3 | 99.3 |
| CDY17236 | Canola | cytosol | 57.04 | 63.78 |
| CDX84328 | Canola | cytosol | 56.34 | 62.99 |
| KRH13257 | Soybean | mitochondrion | 20.42 | 59.18 |
| CDY68974 | Canola | nucleus | 48.59 | 50.74 |
| Bra021903.1-P | Field mustard | nucleus | 77.46 | 50.69 |
| CDX99846 | Canola | cytosol | 47.89 | 49.28 |
| CDY26321 | Canola | nucleus | 47.89 | 49.28 |
| CDX94684 | Canola | cytosol | 47.18 | 49.26 |
| CDX94683 | Canola | cytosol | 46.48 | 48.53 |
| CDY35299 | Canola | nucleus | 46.48 | 48.18 |
| CDX90198 | Canola | cytosol | 46.48 | 47.14 |
| GSMUA_Achr6P26140_001 | Banana | cytosol | 32.39 | 45.1 |
| KRH21137 | Soybean | cytosol | 37.32 | 44.92 |
| CDY72609 | Canola | cytosol | 35.92 | 44.74 |
| CDX99403 | Canola | nucleus | 34.51 | 44.14 |
| CDX98601 | Canola | cytosol | 33.8 | 44.04 |
| CDX78911 | Canola | nucleus | 32.39 | 43.81 |
| Zm00001d043586_P001 | Maize | cytosol, plastid | 28.87 | 43.62 |
| CDX76503 | Canola | nucleus | 33.1 | 42.73 |
| CDY09268 | Canola | nucleus | 33.1 | 42.73 |
| KRH71505 | Soybean | cytosol | 29.58 | 42.42 |
| TraesCS3D01G283600.1 | Wheat | cytosol, plastid | 28.87 | 42.27 |
| GSMUA_Achr4P15500_001 | Banana | cytosol | 34.51 | 42.24 |
| GSMUA_Achr7P24930_001 | Banana | plastid | 29.58 | 42.0 |
| CDY01576 | Canola | nucleus | 32.39 | 41.82 |
| Zm00001d011752_P001 | Maize | cytosol | 26.06 | 41.11 |
| GSMUA_Achr3P31830_001 | Banana | nucleus | 33.8 | 40.68 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.69 | 39.82 |
| Os01t0727700-00 | Rice | cytosol | 29.58 | 38.53 |
| GSMUA_Achr2P09490_001 | Banana | cytosol | 32.39 | 38.33 |
| GSMUA_Achr9P05750_001 | Banana | cytosol | 32.39 | 38.33 |
| GSMUA_Achr9P05760_001 | Banana | nucleus | 33.1 | 37.9 |
| Solyc03g005890.1.1 | Tomato | nucleus | 36.62 | 37.68 |
| GSMUA_Achr1P11590_001 | Banana | cytosol | 30.28 | 37.39 |
| GSMUA_Achr7P24940_001 | Banana | cytosol | 31.69 | 37.19 |
| PGSC0003DMT400035020 | Potato | nucleus | 35.92 | 36.43 |
| PGSC0003DMT400035019 | Potato | nucleus | 34.51 | 35.0 |
| Os05t0518800-00 | Rice | cytosol, mitochondrion, nucleus | 31.69 | 34.62 |
| TraesCS1A01G351000.1 | Wheat | nucleus | 30.99 | 32.35 |
| Zm00001d010814_P001 | Maize | cytosol | 30.99 | 31.88 |
| Os05t0531100-01 | Rice | nucleus | 31.69 | 31.69 |
| TraesCS1B01G365200.1 | Wheat | nucleus | 30.99 | 31.65 |
| TraesCS1B01G351400.1 | Wheat | cytosol | 29.58 | 30.88 |
| KRH11111 | Soybean | nucleus | 37.32 | 30.64 |
| TraesCS1A01G339100.1 | Wheat | cytosol | 30.28 | 28.86 |
| Os01t0748300-00 | Rice | cytosol | 30.99 | 28.39 |
| HORVU1Hr1G076310.1 | Barley | nucleus | 30.28 | 28.29 |
| EES18553 | Sorghum | cytosol | 32.39 | 28.22 |
| Zm00001d043455_P001 | Maize | cytosol | 29.58 | 28.0 |
| KXG33366 | Sorghum | cytosol | 28.87 | 27.89 |
| Zm00001d038814_P001 | Maize | cytosol, nucleus, plastid | 23.94 | 22.67 |
| KXG22361 | Sorghum | nucleus | 26.06 | 22.56 |
Protein Annotations
| EnsemblPlants:CDY43682 | EnsemblPlantsGene:GSBRNA2T00077034001 | InterPro:Senescence_reg_S40 | PANTHER:PTHR33083 | PANTHER:PTHR33083:SF7 | PFAM:PF04520 |
| ProteinID:CDY43682 | ProteinID:CDY43682.1 | SEG:seg | UniParc:UPI0004EE21F8 | UniProt:A0A078I0R3 | MapMan:35.2 |
Description
BnaA04g20090DBnaA04g20090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I0R3]
Coordinates
chrLK032564:+:226908..227626
Molecular Weight (calculated)
16053.8 Da
IEP (calculated)
4.846
GRAVY (calculated)
-0.744
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEEFDEAEV VFSEDLSSVF QRDEEDENGL FGLKERNTSR RIVKRKEKVT ALSNSLPVNI PENMFRRHVE KEEGEHSEEE EEYSNGRGEI VPPHVIVGRR
101: IQGEGGGQMA FSVCSGSGRT LKGRDLSRVR NSVLRLTGFL EA
101: IQGEGGGQMA FSVCSGSGRT LKGRDLSRVR NSVLRLTGFL EA
001: MAEEFDESEV VFSDGLSSVL HKENENRLFG SDMERKKTRR IKRTTTEKAS LSSSLPVSIP ENIFRRYVGK EEDEYSEEEY SEGGGEMIPP HIMIGRRIQG
101: GQMAFSVCSG SGRTLKGRDL SRVRNSVLRL TGFLEA
101: GQMAFSVCSG SGRTLKGRDL SRVRNSVLRL TGFLEA
Arabidopsis Description
At2g34340 [Source:UniProtKB/TrEMBL;Acc:O80783]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.