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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plasma membrane 1
  • cytosol 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:plasma membrane
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr1P00560_001
GSMUA_Achr2P12040_001
GSMUA_Achr2P18250_001
GSMUA_Achr4P21690_001
GSMUA_Achr4P30100_001
GSMUA_Achr8P14860_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G29640.1 GSMUA_Achr11P... AT3G48150.1 21798944
AT1G29640.1 GSMUA_Achr1P00560_001 AT4G17680.1 21798944
AT1G29640.1 GSMUA_Achr2P12040_001 AT4G17680.1 21798944
AT1G29640.1 GSMUA_Achr2P18250_001 AT4G17680.1 21798944
AT1G29640.1 GSMUA_Achr4P21690_001 AT4G17680.1 21798944
AT1G29640.1 GSMUA_Achr4P30100_001 AT4G17680.1 21798944
AT1G29640.1 GSMUA_Achr8P14860_001 AT4G17680.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr7P24930_001 Banana plastid 52.54 62.0
KRH13257 Soybean mitochondrion 22.88 55.1
GSMUA_Achr9P05750_001 Banana cytosol 50.0 49.17
GSMUA_Achr6P26140_001 Banana cytosol 39.83 46.08
GSMUA_AchrUn_... Banana nucleus 42.37 44.25
Zm00001d011752_P001 Maize cytosol 32.2 42.22
Os05t0518800-00 Rice cytosol, mitochondrion, nucleus 45.76 41.54
Zm00001d043586_P001 Maize cytosol, plastid 33.05 41.49
AT4G18980.1 Thale cress cytosol 35.59 39.62
TraesCS3D01G283600.1 Wheat cytosol, plastid 32.2 39.18
GSMUA_Achr2P09490_001 Banana cytosol 39.83 39.17
CDX78911 Canola nucleus 34.75 39.05
KRH21137 Soybean cytosol 38.98 38.98
CDX98601 Canola cytosol 35.59 38.53
Bra012560.1-P Field mustard cytosol 35.59 38.53
CDY09268 Canola nucleus 35.59 38.18
GSMUA_Achr9P05760_001 Banana nucleus 39.83 37.9
Bra005436.1-P Field mustard cytosol 40.68 37.8
CDY17236 Canola cytosol 40.68 37.8
Bra013366.1-P Field mustard nucleus 36.44 37.39
CDX76503 Canola nucleus 34.75 37.27
Bra020981.1-P Field mustard nucleus 34.75 37.27
CDY01576 Canola nucleus 34.75 37.27
GSMUA_Achr4P15500_001 Banana cytosol 36.44 37.07
CDX84328 Canola cytosol 39.83 37.01
Os01t0727700-00 Rice cytosol 33.9 36.7
CDY35299 Canola nucleus 42.37 36.5
KRH71505 Soybean cytosol 30.51 36.36
CDX99403 Canola nucleus 33.9 36.04
Bra030154.1-P Field mustard nucleus 41.53 36.03
TraesCS1B01G365200.1 Wheat nucleus 42.37 35.97
GSMUA_Achr1P11590_001 Banana cytosol 34.75 35.65
CDX99846 Canola cytosol 41.53 35.51
CDY26321 Canola nucleus 41.53 35.51
TraesCS1A01G351000.1 Wheat nucleus 40.68 35.29
TraesCS1B01G351400.1 Wheat cytosol 40.68 35.29
CDY68974 Canola nucleus 40.68 35.29
AT2G34340.1 Thale cress nucleus 40.68 35.29
CDX94683 Canola cytosol 39.83 34.56
CDX94684 Canola cytosol 39.83 34.56
GSMUA_Achr7P24940_001 Banana cytosol 34.75 33.88
CDY72186 Canola cytosol 40.68 33.8
CDY43682 Canola cytosol 40.68 33.8
CDX90198 Canola cytosol 39.83 33.57
CDY72609 Canola cytosol 32.2 33.33
Bra017599.1-P Field mustard cytosol 32.2 33.33
AT1G29640.1 Thale cress cytosol 38.98 32.86
Zm00001d043455_P001 Maize cytosol 41.53 32.67
Zm00001d010814_P001 Maize cytosol 38.14 32.61
AT5G45630.1 Thale cress nucleus 31.36 32.46
Os05t0531100-01 Rice nucleus 38.14 31.69
HORVU1Hr1G076310.1 Barley nucleus 40.68 31.58
TraesCS1A01G339100.1 Wheat cytosol 39.83 31.54
PGSC0003DMT400035020 Potato nucleus 37.29 31.43
KXG33366 Sorghum cytosol 38.98 31.29
PGSC0003DMT400035019 Potato nucleus 36.44 30.71
EES18553 Sorghum cytosol 42.37 30.67
Bra010823.1-P Field mustard nucleus 35.59 30.66
Os01t0748300-00 Rice cytosol 38.98 29.68
Zm00001d038814_P001 Maize cytosol, nucleus, plastid 37.29 29.33
Solyc03g005890.1.1 Tomato nucleus 33.9 28.99
KRH11111 Soybean nucleus 38.14 26.01
KXG22361 Sorghum nucleus 33.9 24.39
Bra032329.1-P Field mustard nucleus 38.14 21.84
Bra021903.1-P Field mustard nucleus 25.42 13.82
Protein Annotations
EnsemblPlants:GSMUA_Achr3P31830_001EnsemblPlants:GSMUA_Achr3T31830_001EnsemblPlantsGene:GSMUA_Achr3G31830_001InterPro:Senescence_reg_S40PANTHER:PTHR33083PANTHER:PTHR33083:SF7
PFAM:PF04520UniParc:UPI000295F52EUniProt:M0SJJ7MapMan:35.2::
Description
DUF584 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G31830_001]
Coordinates
chr3:-:29974199..29974555
Molecular Weight (calculated)
13062.3 Da
IEP (calculated)
6.262
GRAVY (calculated)
-0.771
Length
118 amino acids
Sequence
(BLAST)
001: MEELYESEVV WPDGHEERPS DAGSRPCSSS RGRTWTASAP MDVPRTRRVP ATGEASIGDY GDEERETEMV PPHVLASRGR MVGKAAFSVC TGQGRTLKGR
101: DLRHVRNSVL RMTGFLED
Best Arabidopsis Sequence Match ( AT1G29640.1 )
(BLAST)
001: MSEEFDESEI IFSDNYFPIR RREDGNEKEN NRPVDFRENS ERVWNKSSRR SKTTPLPSAV TAFSSSLPVN IPMRRYSTEE EYSDDDGGRK MIPPHLIVGR
101: RMEGGQMAFS VCTGNGRTLK GRDLSRVRNS VLKLTGFLEA
Arabidopsis Description
At1g29640 [Source:UniProtKB/TrEMBL;Acc:Q9C7N7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.