Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005436.1-P | Field mustard | cytosol | 65.44 | 70.08 |
| CDY17236 | Canola | cytosol | 65.44 | 70.08 |
| CDX84328 | Canola | cytosol | 63.97 | 68.5 |
| KRH13257 | Soybean | mitochondrion | 20.59 | 57.14 |
| AT4G18980.1 | Thale cress | cytosol | 37.5 | 48.11 |
| AT1G29640.1 | Thale cress | cytosol | 46.32 | 45.0 |
| KRH21137 | Soybean | cytosol | 38.97 | 44.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.03 | 43.36 |
| GSMUA_Achr6P26140_001 | Banana | cytosol | 32.35 | 43.14 |
| AT5G45630.1 | Thale cress | nucleus | 35.29 | 42.11 |
| GSMUA_Achr4P15500_001 | Banana | cytosol | 35.29 | 41.38 |
| Os01t0727700-00 | Rice | cytosol | 33.09 | 41.28 |
| Zm00001d011752_P001 | Maize | cytosol | 27.21 | 41.11 |
| GSMUA_Achr7P24930_001 | Banana | plastid | 30.15 | 41.0 |
| GSMUA_Achr3P31830_001 | Banana | nucleus | 35.29 | 40.68 |
| Zm00001d043586_P001 | Maize | cytosol, plastid | 27.94 | 40.43 |
| KRH71505 | Soybean | cytosol | 29.41 | 40.4 |
| TraesCS3D01G283600.1 | Wheat | cytosol, plastid | 28.68 | 40.21 |
| Solyc03g005890.1.1 | Tomato | nucleus | 38.97 | 38.41 |
| GSMUA_Achr2P09490_001 | Banana | cytosol | 32.35 | 36.67 |
| GSMUA_Achr9P05750_001 | Banana | cytosol | 31.62 | 35.83 |
| GSMUA_Achr1P11590_001 | Banana | cytosol | 30.15 | 35.65 |
| GSMUA_Achr7P24940_001 | Banana | cytosol | 31.62 | 35.54 |
| GSMUA_Achr9P05760_001 | Banana | nucleus | 32.35 | 35.48 |
| PGSC0003DMT400035020 | Potato | nucleus | 36.03 | 35.0 |
| PGSC0003DMT400035019 | Potato | nucleus | 35.29 | 34.29 |
| TraesCS1B01G351400.1 | Wheat | cytosol | 32.35 | 32.35 |
| TraesCS1A01G351000.1 | Wheat | nucleus | 30.88 | 30.88 |
| Os05t0518800-00 | Rice | cytosol, mitochondrion, nucleus | 29.41 | 30.77 |
| KRH11111 | Soybean | nucleus | 38.97 | 30.64 |
| Os05t0531100-01 | Rice | nucleus | 30.15 | 28.87 |
| HORVU1Hr1G076310.1 | Barley | nucleus | 31.62 | 28.29 |
| Zm00001d010814_P001 | Maize | cytosol | 28.68 | 28.26 |
| TraesCS1A01G339100.1 | Wheat | cytosol | 30.88 | 28.19 |
| TraesCS1B01G365200.1 | Wheat | nucleus | 28.68 | 28.06 |
| Zm00001d043455_P001 | Maize | cytosol | 30.88 | 28.0 |
| EES18553 | Sorghum | cytosol | 31.62 | 26.38 |
| KXG33366 | Sorghum | cytosol | 27.94 | 25.85 |
| Os01t0748300-00 | Rice | cytosol | 28.68 | 25.16 |
| Zm00001d038814_P001 | Maize | cytosol, nucleus, plastid | 26.47 | 24.0 |
| KXG22361 | Sorghum | nucleus | 27.94 | 23.17 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817996 | UniProt:A0A178VYI2 | ProteinID:AAC27410.1 | ProteinID:AEC08960.1 | EMBL:AK118460 |
| ArrayExpress:AT2G34340 | EnsemblPlantsGene:AT2G34340 | RefSeq:AT2G34340 | TAIR:AT2G34340 | RefSeq:AT2G34340-TAIR-G | EnsemblPlants:AT2G34340.1 |
| TAIR:AT2G34340.1 | EMBL:AY086890 | EMBL:BT004720 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009739 |
| RefSeq:NP_565785.1 | UniProt:O80783 | ProteinID:OAP11370.1 | PFAM:PF04520 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33083 |
| PANTHER:PTHR33083:SF7 | InterPro:Senescence_reg_S40 | UniParc:UPI000000C448 | SEG:seg | : | : |
Description
At2g34340 [Source:UniProtKB/TrEMBL;Acc:O80783]
Coordinates
chr2:-:14488584..14489767
Molecular Weight (calculated)
15339.1 Da
IEP (calculated)
5.854
GRAVY (calculated)
-0.679
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEFDESEV VFSDGLSSVL HKENENRLFG SDMERKKTRR IKRTTTEKAS LSSSLPVSIP ENIFRRYVGK EEDEYSEEEY SEGGGEMIPP HIMIGRRIQG
101: GQMAFSVCSG SGRTLKGRDL SRVRNSVLRL TGFLEA
101: GQMAFSVCSG SGRTLKGRDL SRVRNSVLRL TGFLEA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.