Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011306.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX68797 | Canola | cytosol | 90.77 | 91.47 |
| AT4G31875.1 | Thale cress | cytosol | 46.15 | 43.48 |
Protein Annotations
| EnsemblPlants:CDX75202 | EnsemblPlantsGene:GSBRNA2T00121048001 | ProteinID:CDX75202 | ProteinID:CDX75202.1 | SEG:seg | UniParc:UPI00025467F7 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA01g05000D
Coordinates
chrLK031804:-:63783..64175
Molecular Weight (calculated)
15117.9 Da
IEP (calculated)
9.135
GRAVY (calculated)
-0.746
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESSERVVR LEQHDEITTG DDLVIHPIPQ DLALAVSAIY DRMMVDVEEL LFNQIRDTFL SYTSTPSYLG FVGLPDEECQ QPRPALRNAR RRRPPPARVS
101: RRSSQVSPPV YLRHRFLPQS RKDSSSRRQR
101: RRSSQVSPPV YLRHRFLPQS RKDSSSRRQR
001: MEETSESLAC RLEKYKLIET STIDTAVSYR RLILDFDEDL LNRRRELATA FNSFVWPVFE PIENSFDWPV YSVFLDPEDL LLGEVCEEPR TPLIKTRKIR
101: DPPPRVSRRS SQVSRPIYLR HRFLPQSRKQ SSSSRRQR
101: DPPPRVSRRS SQVSRPIYLR HRFLPQSRKQ SSSSRRQR
Arabidopsis Description
At4g31872/At4g31872 [Source:UniProtKB/TrEMBL;Acc:Q93ZC6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.