Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68797 | Canola | cytosol | 44.2 | 47.29 |
| Bra011306.1-P | Field mustard | nucleus | 43.48 | 46.15 |
| CDX75202 | Canola | nucleus | 43.48 | 46.15 |
Protein Annotations
| ArrayExpress:AT4G31875 | EMBL:AY057635 | EMBL:AY124837 | EnsemblPlants:AT4G31875.1 | EnsemblPlantsGene:AT4G31875 | EntrezGene:829317 |
| GO:GO:0008150 | PO:PO:0000293 | PO:PO:0009005 | ProteinID:AEE85971.1 | ProteinID:OAO97780.1 | RefSeq:AT4G31875 |
| RefSeq:AT4G31875-TAIR-G | RefSeq:NP_567884.1 | SEG:seg | TAIR:AT4G31875 | TAIR:AT4G31875.1 | UniParc:UPI00000A11C4 |
| UniProt:A0A178UW99 | UniProt:Q93ZC6 | MapMan:35.2 | : | : | : |
Description
At4g31872/At4g31872 [Source:UniProtKB/TrEMBL;Acc:Q93ZC6]
Coordinates
chr4:-:15411701..15412451
Molecular Weight (calculated)
16404.5 Da
IEP (calculated)
9.180
GRAVY (calculated)
-0.675
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETSESLAC RLEKYKLIET STIDTAVSYR RLILDFDEDL LNRRRELATA FNSFVWPVFE PIENSFDWPV YSVFLDPEDL LLGEVCEEPR TPLIKTRKIR
101: DPPPRVSRRS SQVSRPIYLR HRFLPQSRKQ SSSSRRQR
101: DPPPRVSRRS SQVSRPIYLR HRFLPQSRKQ SSSSRRQR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.