Factsheet for Bra011306.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75202	Canola	nucleus	100.0	100.0
AT4G31875.1	Thale cress	cytosol	46.15	43.48

Protein Annotations

EnsemblPlants:Bra011306.1	EnsemblPlants:Bra011306.1-P	EnsemblPlantsGene:Bra011306	SEG:seg	UniParc:UPI00025467F7	UniProt:M4D4A2
MapMan:35.2	:	:	:	:	:

Description

unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G31875](projected from arabidopsis_thaliana,AT4G31875)

Coordinates

chrA01:+:2843397..2843789

Molecular Weight (calculated)

15117.9 Da

IEP (calculated)

9.135

GRAVY (calculated)

-0.746

Length

130 amino acids

Sequence
(BLAST)

001: MEESSERVVR LEQHDEITTG DDLVIHPIPQ DLALAVSAIY DRMMVDVEEL LFNQIRDTFL SYTSTPSYLG FVGLPDEECQ QPRPALRNAR RRRPPPARVS
101: RRSSQVSPPV YLRHRFLPQS RKDSSSRRQR

Best Arabidopsis Sequence Match ( AT4G31875.1 )
(BLAST)

001: MEETSESLAC RLEKYKLIET STIDTAVSYR RLILDFDEDL LNRRRELATA FNSFVWPVFE PIENSFDWPV YSVFLDPEDL LLGEVCEEPR TPLIKTRKIR
101: DPPPRVSRRS SQVSRPIYLR HRFLPQSRKQ SSSSRRQR

Arabidopsis Description

At4g31872/At4g31872 [Source:UniProtKB/TrEMBL;Acc:Q93ZC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.