Factsheet for Solyc08g078720.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400012246	Potato	plastid	93.45	92.35
Solyc08g078710.1.1	Tomato	mitochondrion	26.19	22.45
Solyc08g078700.2.1	Tomato	plastid	23.21	18.57
TraesCS7D01G178900.1	Wheat	cytosol	13.1	18.03
GSMUA_Achr10P...	Banana	mitochondrion	22.62	17.59
TraesCS6B01G346700.1	Wheat	mitochondrion	22.02	17.21
TraesCS6A01G316200.1	Wheat	mitochondrion	22.02	17.21
TraesCS7B01G083500.1	Wheat	mitochondrion	23.81	17.17
TraesCS6D01G295500.1	Wheat	mitochondrion	22.02	17.13
TraesCS7D01G179600.1	Wheat	mitochondrion	23.21	16.67
TraesCS7B01G083300.1	Wheat	cytosol	13.1	16.54
EER89430	Sorghum	plastid	22.02	16.3
TraesCS7B01G082900.1	Wheat	plastid	19.05	16.0
TraesCS2B01G531300.1	Wheat	plastid	16.67	15.91
OQU85385	Sorghum	mitochondrion	20.83	15.84
Zm00001d052194_P001	Maize	mitochondrion	20.24	15.6
TraesCS7A01G232500.1	Wheat	plastid	19.05	15.53
TraesCS7A01G177600.1	Wheat	plastid	19.64	15.35
OQU76071	Sorghum	plastid	18.45	15.35
TraesCS7D01G179400.1	Wheat	plastid	19.05	15.24
HORVU7Hr1G036500.7	Barley	plastid	18.45	15.2
TraesCS7D01G179200.1	Wheat	cytosol, plastid	18.45	14.83
TraesCS7D01G179300.1	Wheat	plastid	18.45	14.62
TraesCS7A01G236700.1	Wheat	plastid	18.45	14.62
TraesCS7D01G179000.1	Wheat	plastid	18.45	14.55
TraesCS7B01G083100.1	Wheat	plastid	18.45	14.55
TraesCS7B01G083200.2	Wheat	plastid	19.05	14.48
TraesCS7D01G179500.1	Wheat	plastid	18.45	14.42
Os02t0758000-01	Rice	plastid	18.45	14.09
TraesCS7B01G083400.1	Wheat	plastid	17.86	14.08
TraesCS7D01G179100.1	Wheat	plastid	17.86	13.95
OQU75612	Sorghum	plastid	18.45	13.9
OQU75930	Sorghum	plastid	18.45	13.9
TraesCS7D01G232600.1	Wheat	plastid	17.26	13.88
EER89431	Sorghum	plastid	17.86	13.82
TraesCS7A01G177700.1	Wheat	cytosol, plastid	17.26	13.43
TraesCS7A01G177500.1	Wheat	cytosol, plastid	17.26	13.43
HORVU7Hr1G036470.3	Barley	cytosol, nucleus	19.05	13.22
HORVU6Hr1G077710.3	Barley	cytosol	21.43	13.19
HORVU7Hr1G036570.2	Barley	cytosol	17.26	13.12
Zm00001d044874_P001	Maize	cytosol, plastid	16.07	12.98
HORVU7Hr1G036540.3	Barley	mitochondrion, nucleus, plastid	19.64	12.79
TraesCS7B01G130900.1	Wheat	plastid	11.31	11.73
TraesCS7A01G177800.1	Wheat	nucleus	14.88	10.87
TraesCS5B01G123900.1	Wheat	plastid	14.88	10.46
Os06t0219500-00	Rice	mitochondrion	17.86	9.71
KXG19616	Sorghum	plastid	15.48	9.67

Protein Annotations

EnsemblPlants:Solyc08g078720.2.1	EnsemblPlantsGene:Solyc08g078720.2	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF95	PFAM:PF00011	PFscan:PS01031
SEG:seg	SUPFAM:SSF49764	UniParc:UPI000276ACE6	UniProt:K4CNN1	MapMan:19.1.8.7	:

Description

No Description!

Coordinates

chr8:+:62475339..62476959

Molecular Weight (calculated)

18229.7 Da

IEP (calculated)

4.755

GRAVY (calculated)

-0.326

Length

168 amino acids

Sequence
(BLAST)

001: MALTIRKAAG ASTLFKLLSS KSKFTTAAPS ITRFFSSITT ADSNSLSNEQ KNSTEPILVT GSPQEFKMEN PFQSAGPKEV LEVDTLKDGI LVRVAMPSVG
101: EDGIKVWLEN NTVYFTGKGD IEVESEESGR KYGGSLEFST DCCKAEKVEA QMKNGILRMV IKGEMGED

Best Arabidopsis Sequence Match ( AT5G47590.1 )
(BLAST)

001: MGETKADFRD MSRIPKVREG FYATNNQFQK AGPKGFVQVK VLENDNLYVR VDLPGVPDDA VRYRVDAVRQ KVVFFSGETL NNGKEGVRQY SGTAGLGCDC
101: CEITGVDAKM KDGVLRMILT RVKVVSKAQD NNNNKCTLTV PPFTGQSGIR LEDHPCLVSG RKGALIGVTK AGGGAHFAVD MPGVSPDDVE VYADEKEIRF
201: KAEIKDVYEH DESGRTYLGS VQSPFPALIS NNTIAWDAEF GVLRIAVIPP DDMTTINNKR NPIE

Arabidopsis Description

Heat shock protein HSP20/alpha crystallin family [Source:UniProtKB/TrEMBL;Acc:Q9FGJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.