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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G132100.1 Wheat plastid 98.88 98.88
TraesCS1A01G111900.1 Wheat plastid 98.88 98.88
HORVU1Hr1G024580.5 Barley plastid 99.16 95.66
Os05t0168300-01 Rice plastid 87.64 87.89
KXG21417 Sorghum plastid 85.96 85.47
Zm00001d037512_P001 Maize cytosol 79.49 70.4
CDY69318 Canola cytosol 17.42 69.66
GSMUA_Achr10P... Banana plastid 69.94 69.17
AT3G10970.1 Thale cress plastid 63.76 62.19
CDY00981 Canola plastid 61.8 60.77
KRG97648 Soybean plastid 62.08 60.55
Bra029883.1-P Field mustard plastid 61.52 60.16
VIT_13s0067g02440.t01 Wine grape plastid 60.67 60.0
CDY08561 Canola plastid 61.24 59.89
Solyc06g050310.2.1 Tomato plastid 60.39 59.89
KRH31223 Soybean plastid 61.24 59.56
TraesCS4D01G006200.1 Wheat plastid 26.4 24.54
TraesCS2D01G407000.1 Wheat plastid 22.47 23.19
Protein Annotations
EnsemblPlants:TraesCS1D01G113400.1EnsemblPlantsGene:TraesCS1D01G113400Gene3D:1.10.150.240Gene3D:3.40.50.1000InterPro:HAD-like_sfInterPro:HAD_sf
InterPro:IPR023198InterPro:IPR023214InterPro:PGP-like_dom2PANTHER:PTHR18901PANTHER:PTHR18901:SF29PFAM:PF13419
SEG:segSUPFAM:SSF56784TIGR:cd07505MapMan:35.1::
Description
No Description!
Coordinates
chr1D:-:109815860..109819076
Molecular Weight (calculated)
40249.5 Da
IEP (calculated)
6.715
GRAVY (calculated)
-0.273
Length
356 amino acids
Sequence
(BLAST)
001: MESCSFRTAT SPSPFPSAPS SSSSPRAPCP SLRFARARNG RQMRMRRMAS GFDAFPPLPG KVFVEETIGA EYGEGFETFR MDGPLNIDVD YLNEKLQECF
101: LQRIRHAMKP DEAFGLIFSW DNVIADTDSL KLDAWRQLAL EEGKDIPTAA HIQKSILHGA ADHVLRKVLY WAKEDDQMER LKARLIELYY ESLFKLDTPV
201: EGLREWLDAV RTAGIPCAVA SSLDRRCMVE ALDRMALSKY FKAIVTDEDD MESIAHRFLS AAVKLDRKPS KCIVFEDDPR GVTAAHNCTM MAVSLIGAHP
301: AYELEQADLA VARYSELSVI NLRRMFAHKG LSFMDMQKQI IERSPPKRKL TVDTIF
Best Arabidopsis Sequence Match ( AT3G10970.1 )
(BLAST)
001: MDCSCSTRPS SLLISSEPSF RFPHSNFSSN LSFQIPKDTK LVKQRLVVRS SSGSDYQNGD VNGFPLKPNK LFMQEAIGAE YGEGFETFRQ DGPLKVDVDF
101: WNEKLQDGFL QRIRYAMKPD EAYGLIFSWD NVVADTRSLK LEAWKQLAAE EGKEITEEVD IQRLMLYAGA DHVLRKVLFW EKTQSKIDRL KLRLSEIYYD
201: SLLKLTEPKE GLRDWLDAVT TARIPCAVVS NLDRKNMINA LERMGLQKYF QAVVSEEDGM ESIAHRFLSA AVKLDRKPSK CVVFEDDPRG ITAAHNCTMM
301: AVGLIGAHRA YDLVQADLAV GNFYELSVIN LRRLFANKGS TFMDHEKQII EKSPPKRKLT IDTIF
Arabidopsis Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J510]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.