Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00981 | Canola | plastid | 77.53 | 19.06 |
| Solyc06g050310.2.1 | Tomato | plastid | 76.4 | 18.94 |
| CDY08561 | Canola | plastid | 76.4 | 18.68 |
| KRG97648 | Soybean | plastid | 74.16 | 18.08 |
| KRH31223 | Soybean | plastid | 74.16 | 18.03 |
| VIT_13s0067g02440.t01 | Wine grape | plastid | 70.79 | 17.5 |
| Os05t0168300-01 | Rice | plastid | 69.66 | 17.46 |
| TraesCS1A01G111900.1 | Wheat | plastid | 69.66 | 17.42 |
| TraesCS1B01G132100.1 | Wheat | plastid | 69.66 | 17.42 |
| TraesCS1D01G113400.1 | Wheat | plastid | 69.66 | 17.42 |
| GSMUA_Achr10P... | Banana | plastid | 69.66 | 17.22 |
| HORVU1Hr1G024580.5 | Barley | plastid | 69.66 | 16.8 |
| KXG21417 | Sorghum | plastid | 67.42 | 16.76 |
| Zm00001d037512_P001 | Maize | cytosol | 53.93 | 11.94 |
| CDX86769 | Canola | plastid | 29.21 | 7.24 |
| CDY13271 | Canola | plastid | 29.21 | 7.14 |
Protein Annotations
| EnsemblPlants:CDY69318 | EnsemblPlantsGene:GSBRNA2T00086582001 | Gene3D:3.40.50.1000 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 |
| PANTHER:PTHR18901 | PANTHER:PTHR18901:SF29 | ProteinID:CDY69318 | ProteinID:CDY69318.1 | SUPFAM:SSF56784 | UniParc:UPI0004EE1370 |
| UniProt:A0A078JP48 | MapMan:35.2 | : | : | : | : |
Description
BnaCnng62990DBnaCnng62990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JP48]
Coordinates
chrLK039121:-:2959..3933
Molecular Weight (calculated)
9974.1 Da
IEP (calculated)
5.571
GRAVY (calculated)
0.047
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MKNWKMGFLP RIRYAMKPDE AYGLVLSWDN VVAVVSEEND MESIAHCFLS AAVRLDRKPS KCVVFEDDPS DITAAHNCTM MAVGLISVH
001: MDCSCSTRPS SLLISSEPSF RFPHSNFSSN LSFQIPKDTK LVKQRLVVRS SSGSDYQNGD VNGFPLKPNK LFMQEAIGAE YGEGFETFRQ DGPLKVDVDF
101: WNEKLQDGFL QRIRYAMKPD EAYGLIFSWD NVADTRSLKL EAWKQLAAEE GKEITEEVDI QRLMLYAGAD HVLRKVLFWE KTQSKIDRLK LRLSEIYYDS
201: LLKLTEPKEG LRDWLDAVTT ARIPCAVVSN LDRKNMINAL ERMGLQKYFQ AVVSEEDGME SIAHRFLSAA VKLDRKPSKC VVFEDDPRGI TAAHNCTMMA
301: VGLIGAHRAY DLVQADLAVG NFYELSVINL RRLFANKGST FMDHEKQIIE KSPPKRKLTI DTIF
101: WNEKLQDGFL QRIRYAMKPD EAYGLIFSWD NVADTRSLKL EAWKQLAAEE GKEITEEVDI QRLMLYAGAD HVLRKVLFWE KTQSKIDRLK LRLSEIYYDS
201: LLKLTEPKEG LRDWLDAVTT ARIPCAVVSN LDRKNMINAL ERMGLQKYFQ AVVSEEDGME SIAHRFLSAA VKLDRKPSKC VVFEDDPRGI TAAHNCTMMA
301: VGLIGAHRAY DLVQADLAVG NFYELSVINL RRLFANKGST FMDHEKQIIE KSPPKRKLTI DTIF
Arabidopsis Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J510]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.