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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029883.1-P Field mustard plastid 90.14 90.38
CDY08561 Canola plastid 89.04 89.29
CDY00981 Canola plastid 87.4 88.12
KRH31223 Soybean plastid 67.67 67.49
VIT_13s0067g02440.t01 Wine grape plastid 66.03 66.94
Solyc06g050310.2.1 Tomato plastid 65.75 66.85
KRG97648 Soybean plastid 66.58 66.58
Os05t0168300-01 Rice plastid 63.56 65.35
GSMUA_Achr10P... Banana plastid 64.11 65.0
TraesCS1D01G113400.1 Wheat plastid 62.19 63.76
TraesCS1A01G111900.1 Wheat plastid 61.92 63.48
TraesCS1B01G132100.1 Wheat plastid 61.92 63.48
KXG21417 Sorghum plastid 61.64 62.85
HORVU1Hr1G024580.5 Barley plastid 62.47 61.79
Zm00001d037512_P001 Maize cytosol 57.26 51.99
AT4G11570.2 Thale cress cytosol, plastid 21.64 21.18
Protein Annotations
Gene3D:1.10.150.240Gene3D:3.40.50.1000MapMan:35.1EntrezGene:820268UniProt:A0A178VH81ProteinID:AEE74983.1
ArrayExpress:AT3G10970EnsemblPlantsGene:AT3G10970RefSeq:AT3G10970TAIR:AT3G10970RefSeq:AT3G10970-TAIR-GEnsemblPlants:AT3G10970.1
TAIR:AT3G10970.1Unigene:At.18505UniProt:F4J510GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016311GO:GO:0016787GO:GO:0016791InterPro:HAD-SF_hydro_IAInterPro:HAD-like_sfInterPro:HAD_sf
InterPro:IPR023198InterPro:IPR023214RefSeq:NP_566385.1ProteinID:OAP04675.1PFAM:PF13419InterPro:PGP-like_dom2
PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022
PO:PO:0025281PANTHER:PTHR18901PANTHER:PTHR18901:SF29SUPFAM:SSF56784TIGRFAMs:TIGR01509UniParc:UPI000016337B
Description
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J510]
Coordinates
chr3:-:3432811..3436403
Molecular Weight (calculated)
41569.9 Da
IEP (calculated)
7.103
GRAVY (calculated)
-0.346
Length
365 amino acids
Sequence
(BLAST)
001: MDCSCSTRPS SLLISSEPSF RFPHSNFSSN LSFQIPKDTK LVKQRLVVRS SSGSDYQNGD VNGFPLKPNK LFMQEAIGAE YGEGFETFRQ DGPLKVDVDF
101: WNEKLQDGFL QRIRYAMKPD EAYGLIFSWD NVVADTRSLK LEAWKQLAAE EGKEITEEVD IQRLMLYAGA DHVLRKVLFW EKTQSKIDRL KLRLSEIYYD
201: SLLKLTEPKE GLRDWLDAVT TARIPCAVVS NLDRKNMINA LERMGLQKYF QAVVSEEDGM ESIAHRFLSA AVKLDRKPSK CVVFEDDPRG ITAAHNCTMM
301: AVGLIGAHRA YDLVQADLAV GNFYELSVIN LRRLFANKGS TFMDHEKQII EKSPPKRKLT IDTIF
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.