Factsheet for Solyc06g071700.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 4
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069411	Potato	plastid	85.53	95.94
Solyc08g014330.2.1	Tomato	peroxisome, plastid	85.92	84.39
Os04t0476100-01	Rice	peroxisome	56.2	83.98
GSMUA_Achr6P06650_001	Banana	peroxisome	75.06	83.24
GSMUA_Achr10P...	Banana	peroxisome	75.71	82.65
VIT_17s0000g09100.t01	Wine grape	peroxisome	79.84	78.13
KRH54329	Soybean	plastid	77.0	77.0
TraesCS6B01G236300.4	Wheat	cytosol	64.73	76.96
TraesCS6D01G191300.1	Wheat	peroxisome	74.81	76.89
Os02t0593100-00	Rice	cytosol	46.25	76.82
HORVU6Hr1G053060.2	Barley	peroxisome	74.03	76.71
TraesCS6A01G207600.3	Wheat	peroxisome	74.03	76.1
HORVU2Hr1G082420.6	Barley	cytosol	58.01	75.97
OQU89852	Sorghum	cytosol	62.14	75.63
Solyc05g013440.2.1	Tomato	peroxisome, plastid	75.71	75.52
Os04t0136200-00	Rice	cytosol, peroxisome	59.69	75.37
Zm00001d003309_P002	Maize	mitochondrion, peroxisome	75.84	75.26
EES12364	Sorghum	peroxisome	75.97	75.19
TraesCS2A01G327600.1	Wheat	golgi	74.03	74.32
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	74.29	74.19
TraesCS2B01G354400.1	Wheat	peroxisome	74.16	74.16
GSMUA_Achr6P12170_001	Banana	peroxisome	73.64	70.98
KRH03234	Soybean	nucleus	72.74	43.04
Solyc09g090490.1.1	Tomato	vacuole	23.0	28.3
Solyc08g079430.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	25.71	27.6
Solyc09g075930.1.1	Tomato	extracellular, plasma membrane	22.48	27.15
Solyc09g075940.2.1	Tomato	plasma membrane	22.35	26.99
Solyc03g005160.2.1	Tomato	extracellular, golgi, vacuole	22.48	26.44

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:50.1.4	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491
GO:GO:0046872	GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	UniProt:K4C8P2	PFAM:PF01179
PFAM:PF02727	PFAM:PF02728	PANTHER:PTHR10638	PANTHER:PTHR10638:SF18	SUPFAM:SSF49998	SUPFAM:SSF54416
EnsemblPlantsGene:Solyc06g071700.1	EnsemblPlants:Solyc06g071700.1.1	UniParc:UPI00027672CE	SEG:seg	:	:

Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:K4C8P2]

Coordinates

chr6:-:44162923..44168927

Molecular Weight (calculated)

86288.5 Da

IEP (calculated)

6.674

GRAVY (calculated)

-0.373

Length

774 amino acids

Sequence
(BLAST)

001: MAETSQNVIP TPTNTTAAAA ASFIPPTSVS VVRRENTAVS VSDSAVDSVV VDNQKEQTPA TASSKGIQIM HRAHTCHPLD PLTAAEISVA VATVRAAGDT
101: PEVRDGMRFV EVVLLEPDKT FVALADAYFY PPFQSSLMPR TKGGLLVPSK LPPRHARLIV YNKKTNETSV WIVRLTEVHA AVRGGQHRGK VISSKVIPDV
201: QPPMDAQEYA DCESVVKNYP PFIEAMKRRG IDDMDLVMVD PWCVGYHSEA DAPSRRLAKP LIFCRTESYC PMENGYARPV EGIHVLVDVQ IMQVIEFEDR
301: KLVPLLPADP LRNYTAGETR GGVDRSDVKP LQIIQPEGPS FRVDGNYVQW QKWNFRVGFT PREGLVIHSV AYLDGSRGRR SIAHRLSFVE MVVPYGDPND
401: PHYRKNAFDA GEDGLGKNAH SLKRGCDCLG YIKYFDANFT NFTGGVETIK NCVCLHEEDH GMLWKHQDWR TGLAEVRRSR RLTVSFICTV ANYEYGFYWH
501: FYQDGKIEAE VKLTGILSLG ALQPGESRKY GTTISPGLYA PVHQHFFVAR MNMAVDCKPG EAHNQVVEVN LKVEEPGKEN VHNNAFYAEE TQLRSELQAM
601: RDCDPLSARH WIVRNTRTSN RTGQLTGYKL VPGQNCLPLA GPEAKFLRRA AFLKHNLWVT QYAPGEDFPG GEFPNQNPRV GEGLASWVKE DRSLEESDIV
701: LWYVFGITHV PRLEDWPVMP VEHIGFMLQP HGFFNCSPAV DVPPPRGCDS ESKDSDASEN GESKPTTTGL TAKL

Best Arabidopsis Sequence Match ( AT2G42490.1 )
(BLAST)

001: MASASKKTSA CPHHGGSLPP PKLVSAAPDT VAVWSDADDQ RASKVSLESV IRPVDSFPDN TAKKPANKGI SVMPRTETKH PLDPLSAAEI SVAVATVRAA
101: GANPEVRDGM RFIEVASVEP DKQVVALADA YFFPPFQPSL LPRTKSGPVI PMKLPPRRAR LVVYNQKSNE TSVWIVALSE VHAVTRGGHH RGRVVSSQVI
201: PDVQPPMDAA EYAECEAIVK DFPPFIEAMK RRGIEDMDLV MVDPWCVGYH SEADAPSRRL AKPLIYCRTD SDSPMENGYA RPVEGIYVLV DMQNMVVIEF
301: EDRKFVPLPP PDPLRNYTPG ESRGGVDRSD VKPLQIIQPE GPSFRVRGYF VEWQKWNFRI GFTPREGLVI HSVAYVDGSR GRRPVAHRLS FVEMVVPYGD
401: PNEPHYRKNA FDAGEDGLGK NAHSLKKGCD CLGSIKYFDA HFTNFTGGVE TIENCVCLHE EDHGILWKHQ DWRTGLAEVR RSRRLTVSFL CTVANYEYGF
501: YWHFYQDGKI EAEVKLTGIL SLGALQPGET RKYGTTIAPG LYAPVHQHFF IARMDMSVDC KPAEAFNQVV EVNVRVDERG ENNVHNNAFY AEEKLLKSEA
601: VAMRDCDPLS ARHWIVRNTR TVNRTGQLTG YKLVPGSNCL PLARPEAKFL RRAAFLKHNL WVTRYAPDEK FPGGEFPNQN PRAGEGLATW VKQNRSLEES
701: DVVLWYVFGI THVPRLEDWP VMPVEHIGFT LMPHGFFNCS PAVDVPPNPC ELETKESEVK EVVAPKALQT GLLSKL

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L866]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.