Factsheet for TraesCS4D01G281700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular, cytosol

Predictor Summary:

mitochondrion 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G282700.1	Wheat	extracellular	94.61	97.8
TraesCS4A01G020900.1	Wheat	plastid	95.04	96.4
HORVU0Hr1G009050.1	Barley	cytosol	24.54	93.01
HORVU4Hr1G074530.5	Barley	extracellular, mitochondrion, plastid	88.65	88.9
HORVU4Hr1G074620.2	Barley	extracellular	88.09	86.25
Os07t0572050-00	Rice	extracellular	32.34	84.13
Os07t0572100-01	Rice	cytosol	50.64	80.04
Zm00001d006638_P001	Maize	mitochondrion	79.57	79.24
EER97410	Sorghum	extracellular, vacuole	79.01	78.45
GSMUA_Achr8P03320_001	Banana	extracellular, golgi	59.72	62.19
PGSC0003DMT400034947	Potato	cytosol	12.77	60.81
VIT_05s0020g03310.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	47.66	51.93
PGSC0003DMT400081437	Potato	extracellular, plasma membrane	45.67	49.85
Solyc09g075930.1.1	Tomato	extracellular, plasma membrane	45.25	49.77
Solyc09g075940.2.1	Tomato	plasma membrane	45.25	49.77
KRG91287	Soybean	extracellular, golgi, vacuole	46.38	49.4
PGSC0003DMT400077342	Potato	endoplasmic reticulum, extracellular, plasma membrane	44.96	49.38
AT4G14940.1	Thale cress	extracellular, golgi	45.39	49.23
Bra036916.1-P	Field mustard	extracellular, golgi	45.11	49.0
CDY50266	Canola	extracellular, golgi	45.11	48.92
CDY54865	Canola	extracellular, golgi	44.96	48.77
Solyc03g005160.2.1	Tomato	extracellular, golgi, vacuole	45.11	48.33
KRH35530	Soybean	extracellular, plasma membrane	46.67	47.41
TraesCS2D01G075000.1	Wheat	golgi	46.81	45.02
TraesCS6D01G191300.1	Wheat	peroxisome	27.8	26.03
TraesCS2D01G335300.1	Wheat	peroxisome, unclear	28.09	25.55

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf
InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005507	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165
GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009308	GO:GO:0009719
GO:GO:0009753	GO:GO:0009867	GO:GO:0009987	GO:GO:0030312	GO:GO:0043067	GO:GO:0048038
GO:GO:0055114	GO:GO:0090059	InterPro:IPR036460	PFAM:PF01179	PFAM:PF02727	PFAM:PF02728
ScanProsite:PS01164	PANTHER:PTHR10638	PANTHER:PTHR10638:SF59	SUPFAM:SSF49998	SUPFAM:SSF54416	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS4D01G281700	EnsemblPlants:TraesCS4D01G281700.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4D:+:452803606..452810313

Molecular Weight (calculated)

76968.9 Da

IEP (calculated)

5.796

GRAVY (calculated)

-0.153

Length

705 amino acids

Sequence
(BLAST)

001: MLLSFIQTSA RAEPAARTPL HAMLPLLLAA VSILTAAAAS AHHPHPLDPL SPAELTAVRA AVLASPLVPA RPLTFHYVGL DEPDKADVLS YAYGNSTSSS
101: RSALPRRAFV VARAGGQSHE LRVDVTDAAA PSVLAHAVHR GAGFPTLTLD EQFAAVALPP AHPPFVESVR RRGVDMADVL CAVFPVGWFG GDLPGEERRV
201: VKLLCFVAGA TANFYARPLE GVTLVVDLDR MAIVGYRDRV LLPVPKAEGT DYRAGKAGPP YAGRAPAPGT VVQPEGRGFD IDGHFVRWAN WEFHVGFDVR
301: AGTVISLASI HDADAGARRR VLYRGFVSEV FVPYMDPVEE WYYRTFLDAG EYGLGLWAFP LQPGADCPAN AAYLDGYYAG QDGKPVENKN MICVFERYAG
401: DVAWRHTEAG FPDRLITEVR PDVSLVVRMV VSCGNYDYIL DWEFKTSGSI KFTVSLTGLL EVKGTAYTHA DQITEDAHGT LVAENTLAVY HDHYVTYHLD
501: LDVDGTNNSF VKNTIATKRN EAGTPRRSYW TVLREVAETE ADAQVDVNAA PADLLVVNPN KRTRMGNEVG YRVVPGGATA ASVLDDDDYP QRRASYCKKQ
601: VRVTPYSKAE KWAPGLYADQ STGDDGLAAW SERDRGIRNE DIVLWYTVGI HHIPYQDDFP VMPTVSGGFE LRPANFFERN PLLTTRPPGL DQPPLVNCSC
701: TGDSR

Best Arabidopsis Sequence Match ( AT1G31690.1 )
(BLAST)

001: MAQVHLTIFI FSSIFVISSS SFIPPPHPFD PLTETELKLV RNIINKSYPI GHNHKFTFQY VGLNEPEKSL VLSWHSSPDR NVKPPPRQAF VIARDKGMSR
101: EIVIDFSTRA IVSNKIHVGN GNPMLTIDEQ QAATAVVQKY KPFCDSIIKR GLNLSEVVVT SSTMGWFGET KTKRFIRTIP FYLNGSVNTY LRPIEGMTII
201: VNLDQMKVTG FKDRFTGPMP KANGREYRIS KLKPPFGPSL RSAVVFQPDG PGFKIDGHVV RWANWEFHMS FDVRAGLVIS LASIFDMDMN RYRQVLYKGH
301: LSEMFVPYMD PNDDWYFISY LDCGEFGCGQ TAVSLEPYTD CPPNAAFMDG IFPGQDGTPT KISNVMCIFE KYAGDIMWRH TEAEVPGLKI TEVRPDVSLV
401: ARMVTTVGNY DYIIEYEFKP SGSIKMGVGL TGVLEVKPVE YVHTSEIKED DIYGTIVADN TVGVNHDHFV TFRLDLDIDG TENSFVRTEL VTKRTPKSVN
501: TPRKSYWTTK RNTAKTEADA RVKLGLRAEE LVVVNPTKKT KHGNEVGYRL LPGPASSPLL VQDDYPQIRA AFTNYNVWIT PYNKSEVWAS GLYADRSQGD
601: DTLAVWSQRD REIENKDIVM WYTVGFHHVP CQEDFPTMPT MFGGFELRPT NFFEQNPVLK AKPFNLTTIP KCTTKNE

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:F4IAX0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.