Factsheet for Bra018469.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 1
plastid 1
peroxisome 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97351	Canola	extracellular, plasma membrane	99.33	99.33
CDY04409	Canola	extracellular, plasma membrane	98.79	98.79
AT4G12290.1	Thale cress	extracellular, plasma membrane	86.41	86.64
TraesCS2A01G076300.1	Wheat	cytosol	42.26	69.32
PGSC0003DMT400049076	Potato	extracellular	64.87	66.85
PGSC0003DMT400010041	Potato	extracellular, plasma membrane, vacuole	53.57	66.0
Solyc08g079430.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	63.66	65.6
VIT_02s0025g04560.t01	Wine grape	extracellular, golgi, vacuole	63.53	64.92
KRH13980	Soybean	extracellular, golgi, vacuole	62.85	63.8
KRH32975	Soybean	extracellular, golgi, vacuole	62.72	63.49
TraesCS2B01G091300.1	Wheat	golgi	59.22	60.03
HORVU2Hr1G012710.4	Barley	extracellular	47.38	59.97
TraesCS2D01G075000.1	Wheat	golgi	59.08	59.89
Bra014912.1-P	Field mustard	cytosol	9.56	59.66
Zm00001d025103_P001	Maize	extracellular, golgi, vacuole	57.47	57.39
EES10538	Sorghum	extracellular, golgi	57.87	57.18
Bra034523.1-P	Field mustard	extracellular, vacuole	52.09	54.35
Bra038431.1-P	Field mustard	cytosol	26.65	52.66
Bra038432.1-P	Field mustard	cytosol	35.53	47.48
GSMUA_Achr8P19360_001	Banana	extracellular, golgi	19.38	43.77
Bra036916.1-P	Field mustard	extracellular, golgi	36.34	41.6
Os04t0269600-01	Rice	extracellular, golgi	18.3	40.24
Bra000260.1-P	Field mustard	plastid	26.65	25.13
Bra016871.1-P	Field mustard	plastid	26.38	24.9
Bra000259.1-P	Field mustard	cytosol	0.27	0.7

Protein Annotations

KEGG:00260+1.4.3.21	KEGG:00350+1.4.3.21	KEGG:00360+1.4.3.21	KEGG:00410+1.4.3.21	KEGG:00950+1.4.3.21	KEGG:00960+1.4.3.21
Gene3D:2.70.98.20	Gene3D:3.10.450.40	MapMan:8.5.1	EnsemblPlantsGene:Bra018469	EnsemblPlants:Bra018469.1	EnsemblPlants:Bra018469.1-P
InterPro:Cu_amine_oxidase	InterPro:Cu_amine_oxidase_C	InterPro:Cu_amine_oxidase_C_sf	InterPro:Cu_amine_oxidase_N-reg	InterPro:Cu_amine_oxidase_N2	InterPro:Cu_amine_oxidase_N3
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005773	GO:GO:0005794	GO:GO:0005802
GO:GO:0008131	GO:GO:0008150	GO:GO:0008152	GO:GO:0009308	GO:GO:0016491	GO:GO:0046872
GO:GO:0048038	GO:GO:0055114	InterPro:IPR036460	UniProt:M4DPM8	PFAM:PF01179	PFAM:PF02727
PFAM:PF02728	ScanProsite:PS01164	ScanProsite:PS01165	PANTHER:PTHR10638	PANTHER:PTHR10638:SF38	SUPFAM:SSF49998
SUPFAM:SSF54416	TMHMM:TMhelix	UniParc:UPI0002548023	:	:	:

Description

AT4G12290 (E=0.0) | amine oxidase/ copper ion binding / quinone binding

Coordinates

chrA05:+:8379403..8381960

Molecular Weight (calculated)

83364.8 Da

IEP (calculated)

5.911

GRAVY (calculated)

-0.358

Length

743 amino acids

Sequence
(BLAST)

001: MEPKTFFRLI FLIVTAGFII SFTSTNFPHA PSSTTGLLDC TDSSSSPLCA SRNFLFNKQK PQFSKQDPKP KPKNHDHLSD TLNHPLDPLT VMEFNKVRSL
101: LSSDALFSTG APHAFHSIVL EEPEKNLVRA WEKGNPLPPR KASVIARVGP DTHVLTVDLS SGRVDIVDSP VPVSGYPMMT LEEMNEVTFA PFSSADVNRT
201: IVSGGVNLTD VYCFPLSSGW YGRKEENKRV IKSQCYSSQG TANFYMRPIE GLTILIDLDT KQVIEIVDTG PNIPIPGSAN TEYRFKNLGT TDKTRGLNPI
301: SIEQPRGPSF VIEDNHLVKW ANWEFHLKPD PRAGVVLSQV RVHDPDTQET REVMYQGFVS ELFVPYMDPS DAWYFKTYMD AGEYGFGLQA MPLVPLNDCP
401: RNAAYMDGVF TTADGTPFVR ENMICIFERY AGDIGWRHSE SPISGLPIKE VRPKVTLVVR MAASVGNYDY IIDYEFQTDG LIKAKVGLSG ILMVKGTSYQ
501: NKNQVNKDKE GNEEELHGTL LAENIIGVIH DHYVTFYLDL DVDGPDNSFL KVNLKRQMTE PGESPRKSYM KAVKNIVKTE KDAQIKLSLY DPSEFHVVNS
601: AKTTRVGNPT GYKIVPRATA ASLLDHDDPP QKRAAFTNNQ IWVTPYNKTE KWAAGLFTYQ SHGDDTLAVW SDRDRDIENT DIVVWYTLGF HHVPCQEDFP
701: IMPTVSSSFD LKPANFFERN PILRAAPNFE HDLPVCEVKY VSA

Best Arabidopsis Sequence Match ( AT4G12290.1 )
(BLAST)

001: MDQKSFFRLI FLIVTAGFII SFTSTNFPHA PTRLLDCTDS SSSPLCASRN FLFNKQQPRP IPKHDPKPNT KNHDHVSDTP NHPLDPLTVS EINKIRSILS
101: SHALFTSGTP HALHTVVLEE PEKNLVRHWE KGNPLPPRKA SVIARVGADT HVLTVDISTG RVDSENSPVR VSGYPMMTIE EMNDITVVPF SNADFNRTII
201: SRGVNLTDVI CFPISCGWFG NKEENARVIK SQCFMTQGTP NFYMRPIEGL TILIDLDTKQ VIEITDTGRA IPIPGSTNTD YRFQKLATTD KTRPLNPISI
301: EQPRGPSFVI EDNHLVKWAN WEFHLKPDPR AGVVISRVRV HDPDTHETRD VMYKGFVSEL FVPYMDPSDA WYFKTYMDAG EYGFGLQAMP LVPLNDCPRN
401: AAYMDGVFAA ADGTPFVREN MVCIFESYAG DIGWRHSESP ITGIPIREVR PKVTLVVRMA ASVGNYDYII DYEFQTDGLI KAKVGLSGIL MVKGTTYQNK
501: NQVEKDKDGN EEELHGTLLS ENVIGVIHDH YVTFYLDLDV DGPDNSFVKV NLKRQETEPG ESPRKSYLKA VRNIAKTEKD GQIKLSLYDP SEFHVINSGK
601: TTRVGNPTGY KVVPRTTAAS LLDHDDPPQK RGAFTNNQIW VTPYNKSEQW AGGLFTYQSH GDDTLAVWSD RDRDIENKDI VVWYTLGFHH IPCQEDFPIM
701: PTVSSSFDLK PVNFFERNPI LSAAPNFEHD LPVCGVQSVS A

Arabidopsis Description

Amine oxidase [Source:UniProtKB/TrEMBL;Acc:Q8L742]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.