Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G050970.1 | Barley | cytosol | 66.23 | 97.67 |
| TraesCS1D01G199100.1 | Wheat | plastid | 96.04 | 96.3 |
| Os10t0577700-01 | Rice | plastid | 80.74 | 81.6 |
| EER94425 | Sorghum | plastid | 81.53 | 79.84 |
| Zm00001d030109_P002 | Maize | plastid | 81.27 | 77.0 |
| KRH74369 | Soybean | plastid | 49.08 | 50.41 |
| GSMUA_Achr2P12160_001 | Banana | plastid | 50.92 | 49.74 |
| VIT_02s0012g01800.t01 | Wine grape | plastid | 48.28 | 49.33 |
| AT2G35500.1 | Thale cress | plastid | 47.49 | 46.51 |
| Bra017318.1-P | Field mustard | plastid | 47.23 | 46.13 |
| CDY32125 | Canola | plastid | 47.23 | 46.13 |
| PGSC0003DMT400038338 | Potato | plastid | 46.17 | 45.93 |
| Solyc08g076410.2.1 | Tomato | plastid | 46.17 | 45.34 |
| KRH49412 | Soybean | cytosol | 27.44 | 44.44 |
| CDY61809 | Canola | cytosol | 20.84 | 33.47 |
| CDX94450 | Canola | cytosol | 19.79 | 32.05 |
Protein Annotations
| KEGG:00400+2.7.1.71 | Gene3D:2.60.40.790 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:CS_dom | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:HSP20-like_chaperone |
| InterPro:IPR007052 | InterPro:IPR008978 | PFAM:PF01202 | PFscan:PS51203 | PANTHER:PTHR21087 | PANTHER:PTHR21087:SF11 |
| SUPFAM:SSF49764 | InterPro:Shikimate/glucono_kinase | EnsemblPlantsGene:TraesCS1A01G195500 | EnsemblPlants:TraesCS1A01G195500.2 | TIGR:cd06467 | SEG:seg |
Description
No Description!
Coordinates
chr1A:-:353256939..353259934
Molecular Weight (calculated)
40796.2 Da
IEP (calculated)
4.853
GRAVY (calculated)
-0.131
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAAMSIAAT ATCCSSSFPA NPSQHIATYS RAPGLPLPRP AWRRSLLAAS PPASRLRLLP RTSLSASPAA AHDYEFTDTN GEVELRLDIG KLGIESSRDV
101: FVDVDDMSLL IRAKSDGTLR TLMNVGTLFD RVKSSETIWF IDEDQLVVNL KKVEQELKWP DIDESWKSLT AGITQLLTGI SVHIVGDSTD INEAVAKEIA
201: EGIGYLPVCT SELLESATQK SVDTWAASEG ADSVAEAECV VLESLSSHVR TVVATLGGKQ GAASRFDKWQ YLHSGFTVWL SVSDAGDEAS AKEEARRSVS
301: TGSVAYAKAD VVVKLGGWDP EYTRAVAQGC LVALKQLTLA DKKLAGKKSL YIRLGCRGDW PNIEPPGWDP QSDAPPTNI
101: FVDVDDMSLL IRAKSDGTLR TLMNVGTLFD RVKSSETIWF IDEDQLVVNL KKVEQELKWP DIDESWKSLT AGITQLLTGI SVHIVGDSTD INEAVAKEIA
201: EGIGYLPVCT SELLESATQK SVDTWAASEG ADSVAEAECV VLESLSSHVR TVVATLGGKQ GAASRFDKWQ YLHSGFTVWL SVSDAGDEAS AKEEARRSVS
301: TGSVAYAKAD VVVKLGGWDP EYTRAVAQGC LVALKQLTLA DKKLAGKKSL YIRLGCRGDW PNIEPPGWDP QSDAPPTNI
001: MAAFASGLAI IFNSPSLNPV TTQATFLSSN RIRSSPRVFS GFHSLRRRGF RRFSQNVIPD RFNSFSCNCL SAVSTSTIDY EFTDGGKEVE LRLRLKTGEI
101: LSPKDISVDA DGTSLAVKEK RNGLLITLLE TNHLFEKIMP SETIWYIDED QLVVNMKKVD GELKWPDIVE SWESLTAGMM QLLKGASIYI VGDSTEINQK
201: VSRELAVGLG YSPLDSKELL ESFSKQTIDS WILAEGPDSV AEAESSVLES LSSHVRTVVS TLGGKHGAAG RADQWRHLYS GFTVWVSQTE ATDEESAKEE
301: ARRSKQEREI GYSNADVVVK LQGWDPTHAK SVAQASLSAL KQLIISDKGL PGKKSLYIRL GCRGDWPNIK PPGWDPSSDT GPHPQFT
101: LSPKDISVDA DGTSLAVKEK RNGLLITLLE TNHLFEKIMP SETIWYIDED QLVVNMKKVD GELKWPDIVE SWESLTAGMM QLLKGASIYI VGDSTEINQK
201: VSRELAVGLG YSPLDSKELL ESFSKQTIDS WILAEGPDSV AEAESSVLES LSSHVRTVVS TLGGKHGAAG RADQWRHLYS GFTVWVSQTE ATDEESAKEE
301: ARRSKQEREI GYSNADVVVK LQGWDPTHAK SVAQASLSAL KQLIISDKGL PGKKSLYIRL GCRGDWPNIK PPGWDPSSDT GPHPQFT
Arabidopsis Description
SKL2Probable inactive shikimate kinase like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82290]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.