Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400038338 | Potato | plastid | 95.6 | 96.85 |
VIT_02s0012g01800.t01 | Wine grape | plastid | 59.07 | 61.46 |
KRH74369 | Soybean | plastid | 55.18 | 57.72 |
HORVU1Hr1G050970.1 | Barley | cytosol | 37.82 | 56.81 |
Bra017318.1-P | Field mustard | plastid | 55.44 | 55.15 |
CDY32125 | Canola | plastid | 55.18 | 54.9 |
AT2G35500.1 | Thale cress | plastid | 54.92 | 54.78 |
GSMUA_Achr2P12160_001 | Banana | plastid | 50.78 | 50.52 |
TraesCS1A01G195500.2 | Wheat | plastid | 45.34 | 46.17 |
KRH49412 | Soybean | cytosol | 27.98 | 46.15 |
TraesCS1D01G199100.1 | Wheat | plastid | 44.56 | 45.5 |
Os10t0577700-01 | Rice | plastid | 43.52 | 44.8 |
EER94425 | Sorghum | plastid | 44.82 | 44.7 |
Zm00001d030109_P002 | Maize | plastid | 44.82 | 43.25 |
CDY61809 | Canola | cytosol | 23.58 | 38.56 |
CDX94450 | Canola | cytosol | 23.06 | 38.03 |
Protein Annotations
KEGG:00400+2.7.1.71 | Gene3D:2.60.40.790 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:CS_dom | GO:GO:0000287 |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0009507 | GO:GO:0009536 | InterPro:HSP20-like_chaperone | InterPro:IPR007052 | InterPro:IPR008978 | UniProt:K4CN04 |
PFAM:PF01202 | PFAM:PF04969 | PFscan:PS51203 | PANTHER:PTHR21087 | PANTHER:PTHR21087:SF11 | SUPFAM:SSF49764 |
InterPro:Shikimate/glucono_kinase | EnsemblPlantsGene:Solyc08g076410.2 | EnsemblPlants:Solyc08g076410.2.1 | UniParc:UPI000276BEBE | SEG:seg | : |
Description
Probable inactive shikimate kinase like 2, chloroplastic [Source:Projected from Arabidopsis thaliana (AT2G35500) UniProtKB/Swiss-Prot;Acc:O82290]
Coordinates
chr8:+:60424045..60428371
Molecular Weight (calculated)
42314.8 Da
IEP (calculated)
5.170
GRAVY (calculated)
-0.309
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSSSSS SVALSFLYQN PIKASLSIPK ALSPYSKLTF PSIATFYSAI PRFDYSNFRK INPCLHCSNL PTASTNNTHY EFSDGSSEVE LRLELGQGDV
101: TPKDIYVDAN ESSLAIRVQQ SGIVRTLMET STLYEKIKPA ETIWYIDEDQ LVISLKKQNS ELKWPDIVES WESLSAGITQ LLRGTSIYLV GESTEINQRI
201: ARELAVGLGY TPLCTKELLE TYAKQSMETW VNEEGSDAVA EAESAILESL SSQARAVIAT LGGKKGAAGR VNQWRHLFAG FTVWLSLSQA TDEESAKEEA
301: KRNMQDSGRG YSNAEVVVKL GGWDPNYSKA VAQAVLSALK RLILADKDLP GKKSLYIRLG CRGDWPDIKP PGWDPSTSLD ASSPRS
101: TPKDIYVDAN ESSLAIRVQQ SGIVRTLMET STLYEKIKPA ETIWYIDEDQ LVISLKKQNS ELKWPDIVES WESLSAGITQ LLRGTSIYLV GESTEINQRI
201: ARELAVGLGY TPLCTKELLE TYAKQSMETW VNEEGSDAVA EAESAILESL SSQARAVIAT LGGKKGAAGR VNQWRHLFAG FTVWLSLSQA TDEESAKEEA
301: KRNMQDSGRG YSNAEVVVKL GGWDPNYSKA VAQAVLSALK RLILADKDLP GKKSLYIRLG CRGDWPDIKP PGWDPSTSLD ASSPRS
001: MAAFASGLAI IFNSPSLNPV TTQATFLSSN RIRSSPRVFS GFHSLRRRGF RRFSQNVIPD RFNSFSCNCL SAVSTSTIDY EFTDGGKEVE LRLRLKTGEI
101: LSPKDISVDA DGTSLAVKEK RNGLLITLLE TNHLFEKIMP SETIWYIDED QLVVNMKKVD GELKWPDIVE SWESLTAGMM QLLKGASIYI VGDSTEINQK
201: VSRELAVGLG YSPLDSKELL ESFSKQTIDS WILAEGPDSV AEAESSVLES LSSHVRTVVS TLGGKHGAAG RADQWRHLYS GFTVWVSQTE ATDEESAKEE
301: ARRSKQEREI GYSNADVVVK LQGWDPTHAK SVAQASLSAL KQLIISDKGL PGKKSLYIRL GCRGDWPNIK PPGWDPSSDT GPHPQFT
101: LSPKDISVDA DGTSLAVKEK RNGLLITLLE TNHLFEKIMP SETIWYIDED QLVVNMKKVD GELKWPDIVE SWESLTAGMM QLLKGASIYI VGDSTEINQK
201: VSRELAVGLG YSPLDSKELL ESFSKQTIDS WILAEGPDSV AEAESSVLES LSSHVRTVVS TLGGKHGAAG RADQWRHLYS GFTVWVSQTE ATDEESAKEE
301: ARRSKQEREI GYSNADVVVK LQGWDPTHAK SVAQASLSAL KQLIISDKGL PGKKSLYIRL GCRGDWPNIK PPGWDPSSDT GPHPQFT
Arabidopsis Description
SKL2Probable inactive shikimate kinase like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82290]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.