Factsheet for AT2G35500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017318.1-P	Field mustard	plastid	84.24	84.02
CDY32125	Canola	plastid	83.98	83.76
VIT_02s0012g01800.t01	Wine grape	plastid	60.21	62.8
HORVU1Hr1G050970.1	Barley	cytosol	39.79	59.92
KRH74369	Soybean	plastid	56.33	59.08
PGSC0003DMT400038338	Potato	plastid	55.04	55.91
Solyc08g076410.2.1	Tomato	plastid	54.78	54.92
GSMUA_Achr2P12160_001	Banana	plastid	55.04	54.9
CDY61809	Canola	cytosol	32.56	53.39
CDX94450	Canola	cytosol	31.78	52.56
TraesCS1D01G199100.1	Wheat	plastid	47.29	48.41
Os10t0577700-01	Rice	plastid	46.77	48.27
EER94425	Sorghum	plastid	47.8	47.8
TraesCS1A01G195500.2	Wheat	plastid	46.51	47.49
KRH49412	Soybean	cytosol	28.42	47.01
Zm00001d030109_P002	Maize	plastid	47.8	46.25

Protein Annotations

KEGG:00400+2.7.1.71	Gene3D:2.60.40.790	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:818115	ProteinID:AAC36171.2
ProteinID:AEC09114.1	EMBL:AF412061	ArrayExpress:AT2G35500	EnsemblPlantsGene:AT2G35500	RefSeq:AT2G35500	TAIR:AT2G35500
RefSeq:AT2G35500-TAIR-G	EnsemblPlants:AT2G35500.1	TAIR:AT2G35500.1	EMBL:AY074560	InterPro:CS_dom	GO:GO:0000287
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009536	InterPro:HSP20-like_chaperone	InterPro:IPR007052	InterPro:IPR008978	RefSeq:NP_565805.1
UniProt:O82290	PFAM:PF01202	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PFscan:PS51203	PANTHER:PTHR21087	PANTHER:PTHR21087:SF11	Symbol:SKL2	SUPFAM:SSF49764	InterPro:Shikimate/glucono_kinase
UniParc:UPI000009E1F0	SEG:seg	:	:	:	:

Description

SKL2Probable inactive shikimate kinase like 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82290]

Coordinates

chr2:+:14913937..14916668

Molecular Weight (calculated)

42689.4 Da

IEP (calculated)

6.193

GRAVY (calculated)

-0.334

Length

387 amino acids

Sequence
(BLAST)

001: MAAFASGLAI IFNSPSLNPV TTQATFLSSN RIRSSPRVFS GFHSLRRRGF RRFSQNVIPD RFNSFSCNCL SAVSTSTIDY EFTDGGKEVE LRLRLKTGEI
101: LSPKDISVDA DGTSLAVKEK RNGLLITLLE TNHLFEKIMP SETIWYIDED QLVVNMKKVD GELKWPDIVE SWESLTAGMM QLLKGASIYI VGDSTEINQK
201: VSRELAVGLG YSPLDSKELL ESFSKQTIDS WILAEGPDSV AEAESSVLES LSSHVRTVVS TLGGKHGAAG RADQWRHLYS GFTVWVSQTE ATDEESAKEE
301: ARRSKQEREI GYSNADVVVK LQGWDPTHAK SVAQASLSAL KQLIISDKGL PGKKSLYIRL GCRGDWPNIK PPGWDPSSDT GPHPQFT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.