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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G199800.1 Wheat cytosol 69.22 94.63
TraesCS7B01G103700.1 Wheat cytosol 96.35 93.87
HORVU7Hr1G040480.2 Barley cytosol, mitochondrion 92.14 90.51
EER99779 Sorghum cytosol 83.43 80.75
Zm00001d022286_P003 Maize plastid 83.29 80.54
TraesCS6A01G024900.1 Wheat nucleus 82.72 80.21
EES04337 Sorghum cytosol 80.87 78.6
Os03t0743800-00 Rice nucleus 76.23 75.09
KXG37223 Sorghum cytosol 77.18 73.96
GSMUA_Achr3P29700_001 Banana cytosol 63.21 72.55
VIT_05s0102g00480.t01 Wine grape cytosol 68.84 70.34
Solyc06g082100.2.1 Tomato nucleus 64.39 69.18
KRH13647 Soybean cytosol 71.5 69.17
PGSC0003DMT400078069 Potato cytosol 71.16 69.14
KRH43818 Soybean nucleus 71.4 69.08
CDX76355 Canola cytosol 40.96 66.69
AT1G20960.1 Thale cress cytosol 67.99 66.14
Bra012260.1-P Field mustard cytosol 67.99 65.69
Bra022718.1-P Field mustard cytosol 67.95 65.58
Solyc06g071620.2.1 Tomato nucleus 62.5 65.54
Bra020835.1-P Field mustard cytosol 64.49 65.26
CDY31853 Canola nucleus 36.65 64.45
CDY48648 Canola nucleus 31.3 64.24
CDY01342 Canola cytosol 33.57 63.99
AT2G42270.1 Thale cress cytosol 65.77 63.95
CDY56796 Canola cytosol 27.27 62.95
CDY22556 Canola cytosol 61.93 62.2
Bra008413.1-P Field mustard cytosol 27.41 61.86
CDY52687 Canola cytosol, mitochondrion 24.57 60.49
PGSC0003DMT400069435 Potato mitochondrion 6.44 58.12
CDY31854 Canola cytosol 8.52 55.38
CDY48646 Canola cytosol 8.52 55.38
CDY01343 Canola cytosol 8.52 55.38
CDY28773 Canola cytosol 8.52 55.38
CDY22275 Canola cytosol, nucleus, plasma membrane 27.41 54.57
Solyc06g065300.2.1 Tomato cytosol 16.19 51.9
CDX76356 Canola nucleus 9.71 51.77
TraesCS4A01G057200.1 Wheat mitochondrion, peroxisome 36.17 36.77
TraesCS4A01G136200.1 Wheat nucleus 10.84 17.88
TraesCS4A01G484300.2 Wheat cytosol 8.19 17.39
TraesCS4A01G216300.1 Wheat cytosol 8.14 17.13
TraesCS2A01G154400.1 Wheat cytosol 8.19 17.08
TraesCS7A01G010800.1 Wheat cytosol 8.0 15.87
TraesCS6A01G133400.3 Wheat cytosol 9.66 14.92
TraesCS1A01G323500.1 Wheat plastid 13.12 13.43
TraesCS6A01G312100.1 Wheat plastid 7.39 12.96
CDY04587 Canola plastid 2.18 12.57
Protein Annotations
Gene3D:1.10.10.2530Gene3D:1.10.150.20Gene3D:1.10.3380.10Gene3D:2.60.40.150Gene3D:3.40.50.300MapMan:35.1
InterPro:AAA+_ATPaseInterPro:C2_domain_sfncoils:CoilInterPro:DEAD/DEAH_box_helicase_domGO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0005488GO:GO:0005524InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650
InterPro:IPR014001InterPro:IPR035892InterPro:Ig_E-setInterPro:P-loop_NTPasePFAM:PF00270PFAM:PF00271
PFAM:PF02889PIRSF:PIRSF039073PFscan:PS51192PFscan:PS51194PANTHER:PTHR24075PANTHER:PTHR24075:SF5
SMART:SM00382SMART:SM00487SMART:SM00490SMART:SM00973SUPFAM:SSF158702SUPFAM:SSF46785
SUPFAM:SSF52540SUPFAM:SSF81296InterPro:Sec63-domEnsemblPlantsGene:TraesCS7A01G238700EnsemblPlants:TraesCS7A01G238700.1InterPro:WH_DNA-bd_sf
TIGR:cd00046TIGR:cd00079SEG:seg:::
Description
No Description!
Coordinates
chr7A:-:211705679..211713491
Molecular Weight (calculated)
238892.0 Da
IEP (calculated)
5.902
GRAVY (calculated)
-0.322
Length
2112 amino acids
Sequence
(BLAST)
0001: MESPGGGAEA RARSRQYDYG ANSNLVVNTG SRPRDAHHEP TGEPQTLSGR IRARSFGDRA VRTRPPGLEE KRGRSRGKKA RDAASADLPH RDAKRMRRGS
0101: VRPEDSVLSL AHDALYMPRT RETRTAYEAL LSVIQRQLGG QPLDVLADAA DEVLAALKDD RVWNPDKKKV IEKLINPVSD QMFGQLVSIG KLITDFHDAA
0201: GDSAGVPSAD GTDMPLDDDI GITVEFEDDE DEESNIYQVQ DELDDENEDD LVELNVPGTM QTDGELYDDD MQSCNKGLTL DVQDIDAYWL QRKISQAYEN
0301: IDPQHSQKLA EEILKVIAEG DDRDVENRLV TLLDHENFDL IKLLLHNRLK IVWCTFLARA EDQEQRKKIA EEMMSDPRLA PILEQLHSTR ASAKERQKNL
0401: ERSIRDEAKR LLNNDSAGTD GARDSKAVDR YIESGWLKGQ RQLLDLDNLS FHQGSLLMSN KKCELPPGSF RTPQRGYEEV HVPALRPLPY ESAERIVKIS
0501: DMPEWARPAF AGMTQLNRVQ SKVYDTALYK PDNILLCAPT GAGKTNVAVL TILQQIGLHM KDGEFDNTKY KIVYVAPMKA LVAEVVGNLS ARLKEYNVTV
0601: SELSGDQNLT KQQIDETQII VTTPEKWDIV TRKSSDRIYT QMVKLLIIDE IHLLHDNRGP VLESIVSRTV RQIETTKEHI RLVGLSATLP NYEDIAVFLR
0701: VRSDGLFHFD NSYRPCPLAQ QYIGITAKKP LQRFQLMNEI CYEKVMAAAG KHQVLIFVHS RKETAQTARA IRDTALANDV LPRFLKDDSA SQEILCAHAE
0801: LVKSSDLKDL LPYGFAIHHA GLARVDRELV EKLFVDKHIQ VLISIATLAW GVNLPAHTVI IKGTQIYNSE KGAWTELSPL DVMQMLGRAG RPQYDTHGEG
0901: IILTSHSELQ YYLSLMNQQL PIESQFISKL ADQLNAEIVL GTIQNAQEAC SERTLDERRA DLVHSAANLL DRNNLIKYDK RTGYFQATDL GRISSYYYIS
1001: HRTISTYNEY LKPTMGYIEL CQLFSLSEEF KYVSVRKDEK MELEKLLDRV PIPVKESLEE PSTKINVLLQ AYISGLKLEG LSLGSDMVYI KQSAGRLSRA
1101: IFEIVLKRGW SQLAEKALNL CTMIDKQMWS VQNPLRQFPG IPNEILMKLE KKELAWERYF DLSSQEIGEL IRYPKMGRRL HQCIHQLPKL NLSAHVQPIT
1201: RTVLGFELTL TADFQWDDKI HGYVEPFWIL VEDNDSECIL HHEYFMLKKQ WLNEDHTLNF TVPIYEPLPP LYFIHVVSDK WLGSWTILPV SFRHLVLPDK
1301: HAPPTELLDL QPLPVTALRN ARYEGLYSAW KHFNPIQTQV FSVLYNSDDS VLVAAPTGSG KTICAEFAIL RNHQKAVSGE NNMRIVYIAP IEALAKERYR
1401: DWEMKFGEFA CVVELTGETA RDLKLLDKGE IIISTPEKWD SLSRRWKQRK HIQQVSLFIV DELHLIGSEK GHVLDIIVSR MRRIANHTCS NIRIVALSAS
1501: LANAKDLGEW IGATSHGLFN FPPAVRPVPS EIHIQGMDIA NFEARMQAMA KPTYNAIRQY AKHGKPALVF VPATKHARFT ALNLCTYSNA EGCGTPFLLG
1601: SEDEMDTYTR CVNEETLVNT LKCGVGYLHE ALSDLDQEVV TQLFLCGKIQ VCVVSSTMCW GRSLPSHLVV VMGTQYSDGW GSVTDYPVSD LLQMMGHASR
1701: PLQDNSGKCV ILCHAPRKEY HRKFLSEAFP VESHLHHNLH DHMNAEVVCG VVENKQAAVD YLTWTFMHVS DHLSELVETV LDDLESSKCV VIEEDTFLKP
1801: LNLGLIASYY YISYKTIERF SSMITQKTKI KGLLEILASA SEYAELPSCR GEEESIETLV RHQRFSAENS KNDDVHIKAN ALLQAHFSRQ TVVGNLAADQ
1901: REILLPAPRL IKSLVDAMEL SQMVTQGMWD RDSVLLQLPH FTKELTGRCQ ENGIDNIFDL AEMSADKMQN LLQLPNSQLK DIIGFIKRFP DIEMAYEVLE
2001: GDDIRASGNV TLQVTLERDM TNLPSEVGPV NAPRYPKPRQ EGWWLVIGDS SSDQLLAIKW VAVLQRARLK LEFIAPAEAG KKDFMVFLMS DSYLGIDQEY
2101: VFTVNVKDAG GD
Best Arabidopsis Sequence Match ( AT1G20960.1 )
(BLAST)
0001: MANLGGGAEA HARFKQYEYR ANSSLVLTTD NRPRDTHEPT GEPETLWGKI DPRSFGDRVA KGRPQELEDK LKKSKKKERD VVDDMVNIRQ SKRRRLREES
0101: VLTDTDDAVY QPKTKETRAA YEAMLGLIQK QLGGQPPSIV SGAADEILAV LKNDAFRNPE KKMEIEKLLN KIENHEFDQL VSIGKLITDF QEGGDSGGGR
0201: ANDDEGLDDD LGVAVEFEEN EEDDEESDPD MVEEDDDEED DEPTRTGGMQ VDAGINDEDA GDANEGTNLN VQDIDAYWLQ RKISQAYEQQ IDPQQCQVLA
0301: EELLKILAEG DDRVVEDKLL MHLQYEKFSL VKFLLRNRLK VVWCTRLARA EDQEERNRIE EEMRGLGPEL TAIVEQLHAT RATAKEREEN LQKSINEEAR
0401: RLKDETGGDG GRGRRDVADR DSESGWVKGQ RQMLDLESLA FDQGGLLMAN KKCDLPPGSY RSHGKGYDEV HVPWVSKKVD RNEKLVKITE MPDWAQPAFK
0501: GMQQLNRVQS KVYDTALFKA ENILLCAPTG AGKTNVAMLT ILQQLEMNRN TDGTYNHGDY KIVYVAPMKA LVAEVVGNLS NRLKDYGVIV RELSGDQSLT
0601: GREIEETQII VTTPEKWDII TRKSGDRTYT QLVRLLIIDE IHLLHDNRGP VLESIVARTL RQIETTKENI RLVGLSATLP NYEDVALFLR VDLKKGLFKF
0701: DRSYRPVPLH QQYIGISVKK PLQRFQLMND LCYQKVLAGA GKHQVLIFVH SRKETSKTAR AIRDTAMAND TLSRFLKEDS VTRDVLHSHE DIVKNSDLKD
0801: ILPYGFAIHH AGLSRGDREI VETLFSQGHV QVLVSTATLA WGVNLPAHTV IIKGTQVYNP EKGAWMELSP LDVMQMLGRA GRPQYDQHGE GIIITGYSEL
0901: QYYLSLMNEQ LPIESQFISK LADQLNAEIV LGTVQNAREA CHWLGYTYLY IRMVRNPTLY GLAPDALAKD VVLEERRADL IHSAATILDK NNLVKYDRKS
1001: GYFQVTDLGR IASYYYITHG TIATYNEHLK PTMGDIDLYR LFSLSDEFKY VTVRQDEKME LAKLLDRVPI PIKETLEEPS AKINVLLQAY ISQLKLEGLS
1101: LTSDMVYITQ SAGRLVRALY EIVLKRGWAQ LAEKALNLSK MVGKRMWSVQ TPLRQFHGLS NDILMQLEKK DLVWERYYDL SAQELGELIR SPKMGKPLHK
1201: FIHQFPKVTL SAHVQPITRT VLNVELTVTP DFLWDEKIHK YVEPFWIIVE DNDGEKILHH EYFLLKKQYI DEDHTLHFTV PIFEPLPPQY FVRVVSDKWL
1301: GSETVLPVSF RHLILPEKYP PPTELLDLQP LPVTALRNPN YEILYQDFKH FNPVQTQVFT VLYNTNDNVL VAAPTGSGKT ICAEFAILRN HHEGPDATMR
1401: VVYIAPLEAI AKEQFRIWEG KFGKGLGLRV VELTGETALD LKLLEKGQII ISTPEKWDAL SRRWKQRKYV QQVSLFIVDE LHLIGGQHGP VLEVIVSRMR
1501: YISSQVINKI RIVALSTSLA NAKDLGEWIG ASSHGLFNFP PGVRPVPLEI HIQGVDISSF EARMQAMTKP TYTAIVQHAK NKKPAIVFVP TRKHVRLTAV
1601: DLMAYSHMDN PQSPDFLLGK LEELDPFVEQ IREETLKETL CHGIGYLHEG LSSLDQEIVT QLFEAGRIQV CVMSSSLCWG TPLTAHLVVV MGTQYYDGRE
1701: NSHSDYPVPD LLQMMGRASR PLLDNAGKCV IFCHAPRKEY YKKFLYEAFP VESQLQHFLH DNFNAEVVAG VIENKQDAVD YLTWTFMYRR LPQNPNYYNL
1801: QGVSHRHLSD HLSELVENTL SDLEASKCIE VEDEMELSPL NLGMIASYYY ISYTTIERFS SLLSSKTKMK GLLEILTSAS EYDMIPIRPG EEDTVRRLIN
1901: HQRFSFENPK CTDPHVKANA LLQAHFSRQN IGGNLAMDQR DVLLSATRLL QAMVDVISSN GWLNLALLAM EVSQMVTQGM WERDSMLLQL PHFTKDLAKR
2001: CQENPGKNIE TVFDLVEMED EERQELLKMS DAQLLDIARF CNRFPNIDLT YEIVGSEEVN PGKEVTLQVM LERDMEGRTE VGPVDSLRYP KTKEEGWWLV
2101: VGDTKTNQLL AIKRVSLQRK VKVKLDFTAP SEPGEKSYTL YFMCDSYLGC DQEYSFSVDV KGSGAGDRME E
Arabidopsis Description
BRR2ADExH-box ATP-dependent RNA helicase DExH12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYP1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.