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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400078069 Potato cytosol 87.71 83.39
KRH13647 Soybean cytosol 87.66 83.0
KRH43818 Soybean nucleus 87.66 83.0
Solyc06g082100.2.1 Tomato nucleus 78.62 82.66
CDY48646 Canola cytosol 12.92 82.15
CDY31854 Canola cytosol 12.92 82.15
CDY28773 Canola cytosol 12.92 82.15
CDY01343 Canola cytosol 12.87 81.85
GSMUA_Achr3P29700_001 Banana cytosol 72.57 81.52
CDX76355 Canola cytosol 50.56 80.57
AT1G20960.1 Thale cress cytosol 82.54 78.58
Bra022718.1-P Field mustard cytosol 82.34 77.79
Bra012260.1-P Field mustard cytosol 82.2 77.72
Solyc06g071620.2.1 Tomato nucleus 74.12 76.07
Bra020835.1-P Field mustard cytosol 76.58 75.85
EER99779 Sorghum cytosol 79.39 75.21
Zm00001d022286_P003 Maize plastid 79.39 75.14
AT2G42270.1 Thale cress cytosol 78.08 74.31
TraesCS6A01G024900.1 Wheat nucleus 77.84 73.88
TraesCS6B01G034100.1 Wheat cytosol 77.75 73.75
TraesCS6D01G028200.1 Wheat cytosol 77.7 73.64
EES04337 Sorghum cytosol 77.26 73.49
HORVU6Hr1G004350.3 Barley cytosol, mitochondrion, nucleus 77.75 73.38
CDY31853 Canola nucleus 41.9 72.11
CDY01342 Canola cytosol 38.41 71.66
CDY22556 Canola cytosol 72.81 71.56
CDY48648 Canola nucleus 35.46 71.23
Solyc06g065300.2.1 Tomato cytosol 22.25 69.8
TraesCS7D01G199800.1 Wheat cytosol 51.62 69.06
TraesCS7B01G103700.1 Wheat cytosol 72.33 68.96
TraesCS7A01G238700.1 Wheat cytosol 70.34 68.84
KXG37223 Sorghum cytosol 73.34 68.78
HORVU7Hr1G040480.2 Barley cytosol, mitochondrion 71.21 68.47
Os03t0743800-00 Rice nucleus 70.2 67.68
CDY56796 Canola cytosol 29.56 66.78
Bra008413.1-P Field mustard cytosol 29.66 65.49
CDY22275 Canola cytosol, nucleus, plasma membrane 28.79 56.08
CDX76356 Canola nucleus 10.74 56.06
VIT_17s0000g07230.t01 Wine grape cytosol 29.9 45.11
VIT_17s0000g07240.t01 Wine grape cytosol 10.69 31.08
VIT_14s0066g00880.t01 Wine grape nucleus 12.39 20.08
VIT_06s0004g05980.t01 Wine grape mitochondrion 3.19 19.82
VIT_11s0065g00340.t01 Wine grape cytosol 8.71 18.09
VIT_06s0009g01750.t01 Wine grape cytosol 8.42 17.45
VIT_06s0004g05970.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 8.66 16.38
VIT_01s0026g01000.t01 Wine grape cytosol 7.6 14.76
VIT_04s0008g03960.t01 Wine grape nucleus 14.37 13.76
Protein Annotations
Gene3D:1.10.10.2530Gene3D:1.10.150.20Gene3D:1.10.3380.10MapMan:16.4.7.1.4Gene3D:2.60.40.150Gene3D:3.40.50.300
InterPro:AAA+_ATPaseInterPro:C2_domain_sfProteinID:CCB59842ProteinID:CCB59842.1ncoils:CoilInterPro:DEAD/DEAH_box_helicase_dom
UniProt:F6HYS8EMBL:FN596500GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0005488
GO:GO:0005524InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650InterPro:IPR014001InterPro:IPR035892
InterPro:Ig_E-setInterPro:P-loop_NTPasePFAM:PF00270PFAM:PF00271PFAM:PF02889PIRSF:PIRSF039073
PFscan:PS51192PFscan:PS51194PANTHER:PTHR24075PANTHER:PTHR24075:SF5SMART:SM00382SMART:SM00487
SMART:SM00490SMART:SM00973SUPFAM:SSF158702SUPFAM:SSF46785SUPFAM:SSF52540SUPFAM:SSF81296
InterPro:Sec63-domUniParc:UPI000210A24FArrayExpress:VIT_05s0102g00480EnsemblPlantsGene:VIT_05s0102g00480EnsemblPlants:VIT_05s0102g00480.t01InterPro:WH_DNA-bd_sf
SEG:seg:::::
Description
No Description!
Coordinates
chr5:-:22424480..22433155
Molecular Weight (calculated)
234502.0 Da
IEP (calculated)
5.604
GRAVY (calculated)
-0.336
Length
2067 amino acids
Sequence
(BLAST)
0001: MAHLGGGAEA HARFKQYEYR ANSSLVLTTD SRPRDTHEPT GEPESLYGKI DPKTFGDRAY RGRPPELDEK LKKSKRKKER EPQNASEPVL SRQSKRRRIQ
0101: EESVLSSTEE GVYQPKTKET RAAYEAMLSV IQQQLGGQPL NIVSGAADEI LAVLKNETVK NPDKKKEIER LLNPIPNHIF DQLVSIGRLI TDFQDGGDAA
0201: GPTAANGDDA LDDDVGVAVE FEENEDEEEE SDLDMVQEDE EEDDDVMEQN GSGAMQMGGG IDDDDMQEAN EGMTLNVQDI DAYWLQRKIS QAYEQQIDPQ
0301: QCQKLAEEVL KILAEGDDRE VETKLLVHLQ FDKFSLIKFL LRNRLKIVWC TRLARAEDQE ERKKIEEEMT GSGSDLAAIL EQRGPGYEEV HVPALKAAAL
0401: GPGEELVKIS AMPDWAQPAF KGMTQLNRVQ SKVYETALFT AENVLLCAPT GAGKTNVAML TILQQIALNR NADGSFNHSN YKIVYVAPMK ALVAEVVGNL
0501: SNRLQHYDVK VKELSGDQSL TRQQIEETQI IVTTPEKWDI ITRKSGDRTY TQLVKLLIVD EIHLLHDNRG PVLESIVART VRQIETTKEH IRLVGLSATL
0601: PNYEDVALFL RVDLKKGLFH FDNSYRPCPL AQQYIGITVK KPLQRFQLMN DVCYEKVMAV AGKHQVLIFV HSRKETAKTA QILHSHTELV KNNDLKDLLP
0701: YGFAIHHAGM ARADRQLVEE LFADGHVQVL VSTATLAWGV NLPAHTVIIK GTQIYNPEKG AWTELSPLDV MQMLGRAGRP QYDSYGEGII ITGHSELQYY
0801: LSLMNQQLPI ESQFVSKLAD QLNAEIVLGT VQNAREACSW IGYTYLYVRM LRNPTLYGLS HDALTRDITL EERRADLIHS AAIILDRNNL VKYDRKSGYF
0901: QVTDLGRIAS YYYITHGTIS TYNEHLKPTM GDIELCRLFS LSEEFKYVTV RQDEKMELAK LLDRVPIPIK ESLEEPSAKI NVLLQAYISQ LKLEGLSLTS
1001: DMVFITQSAG RLVRALFEIV LKRGWAQLTE KALNLCKMVN KRMWSVQTPL RQFNAIPNEI LMKLEKKDLA WERYYDLSSQ ELGELIRYPK MGRTLHKFIH
1101: QFPKLDLAAH VQPITRTVLR VELTITPDFQ WEDKVHGFVE PFWVIVEDND GEYILHHEYF MMKKQYIDEV HTLNFTVPIY EPLPPQYFIR VVSDRWLGSQ
1201: SVLPVSFRHL ILPEKYPPPT ELLDLQPLPV TALRNPSYEA LYQEFKHFNP IQTQVFTVLY NTDDNVLVAA PTGSGKTICA EFAILRNHQK GSESIVRAVY
1301: IAPIEALAKE RYRDWERKFG RGLGMRVVEL TGETATDLKL LERGQVIIST PEKWDALSRR WKQRKHVQQV SLFIIDELHL IGGQGGPVLE VIVSRMRYIA
1401: SQGENKIRIV ALSTSLANAK DLGEWIGATS HGLFNFPPGV RPVPLEIHIQ GVDIANFEAR MQAMTKPTYT AIVQHAKNRK PAIVFVPTRK HVRLTAVDLT
1501: TYSSADGGEN PTFLLRSPEE LEPFVGKIQE EMLRATLRHG VGYLHEGLTG MDQEVVSQLF EAGWIQVCVM SSSLCWGVPL SAHLVVVMGT QYYDGRENAH
1601: TDYPVTDLLQ MMGHASRPLL DNSGKCVILC HAPRKEYYKK FLYEAFPVES HLQHYLHDNL NAEIVVGVIE NKQDAVDYLT WTFMYRRLTQ NPNYYNLQGV
1701: SHRHLSDHLS ESVENTLSDL EASKCVAIED DMDLSPLNLG MIASYYYISY TTIERFSSSL TSKTKMKGLL EILASASEYA QIPIRPGEED LIRRLINHQR
1801: FSFENPKCTD PHIKANALLQ AHFSRQIVGG NLALDQREVL LSAGRLLQAM VDVISSNGWL NLALLAMEVS QMVTQGMWER DSMLLQLPHF TKDLAKRCQE
1901: NPGKSIETVF DLVEMEDDER RELLQMSDSQ LLDIARFCNR FPNIDITYEV LDSENLRAGD DITLQVMLER DLEGRTEVGS VDAPRYPKAK EEGWWLVVGD
2001: TKSNQLLAIK RVALQRKSKV KLEFAVPAEA GRKSYTLYFM CDSYLGCDQE YSFSVDVMDA SGPEEDS
Best Arabidopsis Sequence Match ( AT1G20960.1 )
(BLAST)
0001: MANLGGGAEA HARFKQYEYR ANSSLVLTTD NRPRDTHEPT GEPETLWGKI DPRSFGDRVA KGRPQELEDK LKKSKKKERD VVDDMVNIRQ SKRRRLREES
0101: VLTDTDDAVY QPKTKETRAA YEAMLGLIQK QLGGQPPSIV SGAADEILAV LKNDAFRNPE KKMEIEKLLN KIENHEFDQL VSIGKLITDF QEGGDSGGGR
0201: ANDDEGLDDD LGVAVEFEEN EEDDEESDPD MVEEDDDEED DEPTRTGGMQ VDAGINDEDA GDANEGTNLN VQDIDAYWLQ RKISQAYEQQ IDPQQCQVLA
0301: EELLKILAEG DDRVVEDKLL MHLQYEKFSL VKFLLRNRLK VVWCTRLARA EDQEERNRIE EEMRGLGPEL TAIVEQLHAT RATAKEREEN LQKSINEEAR
0401: RLKDETGGDG GRGRRDVADR DSESGWVKGQ RQMLDLESLA FDQGGLLMAN KKCDLPPGSY RSHGKGYDEV HVPWVSKKVD RNEKLVKITE MPDWAQPAFK
0501: GMQQLNRVQS KVYDTALFKA ENILLCAPTG AGKTNVAMLT ILQQLEMNRN TDGTYNHGDY KIVYVAPMKA LVAEVVGNLS NRLKDYGVIV RELSGDQSLT
0601: GREIEETQII VTTPEKWDII TRKSGDRTYT QLVRLLIIDE IHLLHDNRGP VLESIVARTL RQIETTKENI RLVGLSATLP NYEDVALFLR VDLKKGLFKF
0701: DRSYRPVPLH QQYIGISVKK PLQRFQLMND LCYQKVLAGA GKHQVLIFVH SRKETSKTAR AIRDTAMAND TLSRFLKEDS VTRDVLHSHE DIVKNSDLKD
0801: ILPYGFAIHH AGLSRGDREI VETLFSQGHV QVLVSTATLA WGVNLPAHTV IIKGTQVYNP EKGAWMELSP LDVMQMLGRA GRPQYDQHGE GIIITGYSEL
0901: QYYLSLMNEQ LPIESQFISK LADQLNAEIV LGTVQNAREA CHWLGYTYLY IRMVRNPTLY GLAPDALAKD VVLEERRADL IHSAATILDK NNLVKYDRKS
1001: GYFQVTDLGR IASYYYITHG TIATYNEHLK PTMGDIDLYR LFSLSDEFKY VTVRQDEKME LAKLLDRVPI PIKETLEEPS AKINVLLQAY ISQLKLEGLS
1101: LTSDMVYITQ SAGRLVRALY EIVLKRGWAQ LAEKALNLSK MVGKRMWSVQ TPLRQFHGLS NDILMQLEKK DLVWERYYDL SAQELGELIR SPKMGKPLHK
1201: FIHQFPKVTL SAHVQPITRT VLNVELTVTP DFLWDEKIHK YVEPFWIIVE DNDGEKILHH EYFLLKKQYI DEDHTLHFTV PIFEPLPPQY FVRVVSDKWL
1301: GSETVLPVSF RHLILPEKYP PPTELLDLQP LPVTALRNPN YEILYQDFKH FNPVQTQVFT VLYNTNDNVL VAAPTGSGKT ICAEFAILRN HHEGPDATMR
1401: VVYIAPLEAI AKEQFRIWEG KFGKGLGLRV VELTGETALD LKLLEKGQII ISTPEKWDAL SRRWKQRKYV QQVSLFIVDE LHLIGGQHGP VLEVIVSRMR
1501: YISSQVINKI RIVALSTSLA NAKDLGEWIG ASSHGLFNFP PGVRPVPLEI HIQGVDISSF EARMQAMTKP TYTAIVQHAK NKKPAIVFVP TRKHVRLTAV
1601: DLMAYSHMDN PQSPDFLLGK LEELDPFVEQ IREETLKETL CHGIGYLHEG LSSLDQEIVT QLFEAGRIQV CVMSSSLCWG TPLTAHLVVV MGTQYYDGRE
1701: NSHSDYPVPD LLQMMGRASR PLLDNAGKCV IFCHAPRKEY YKKFLYEAFP VESQLQHFLH DNFNAEVVAG VIENKQDAVD YLTWTFMYRR LPQNPNYYNL
1801: QGVSHRHLSD HLSELVENTL SDLEASKCIE VEDEMELSPL NLGMIASYYY ISYTTIERFS SLLSSKTKMK GLLEILTSAS EYDMIPIRPG EEDTVRRLIN
1901: HQRFSFENPK CTDPHVKANA LLQAHFSRQN IGGNLAMDQR DVLLSATRLL QAMVDVISSN GWLNLALLAM EVSQMVTQGM WERDSMLLQL PHFTKDLAKR
2001: CQENPGKNIE TVFDLVEMED EERQELLKMS DAQLLDIARF CNRFPNIDLT YEIVGSEEVN PGKEVTLQVM LERDMEGRTE VGPVDSLRYP KTKEEGWWLV
2101: VGDTKTNQLL AIKRVSLQRK VKVKLDFTAP SEPGEKSYTL YFMCDSYLGC DQEYSFSVDV KGSGAGDRME E
Arabidopsis Description
BRR2ADExH-box ATP-dependent RNA helicase DExH12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYP1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.