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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G024900.1 Wheat nucleus 99.59 99.63
TraesCS6D01G028200.1 Wheat cytosol 99.68 99.59
HORVU6Hr1G004350.3 Barley cytosol, mitochondrion, nucleus 98.99 98.49
EER99779 Sorghum cytosol 90.87 90.74
Zm00001d022286_P003 Maize plastid 90.5 90.29
EES04337 Sorghum cytosol 87.52 87.76
TraesCS7B01G103700.1 Wheat cytosol 82.56 82.98
KXG37223 Sorghum cytosol 82.79 81.85
GSMUA_Achr3P29700_001 Banana cytosol 68.56 81.2
VIT_05s0102g00480.t01 Wine grape cytosol 73.75 77.75
KRH13647 Soybean cytosol 77.01 76.87
PGSC0003DMT400078069 Potato cytosol 76.64 76.82
KRH43818 Soybean nucleus 76.82 76.68
Solyc06g082100.2.1 Tomato nucleus 68.88 76.35
AT1G20960.1 Thale cress cytosol 74.25 74.53
CDX76355 Canola cytosol 44.01 73.94
Bra012260.1-P Field mustard cytosol 73.34 73.1
Bra022718.1-P Field mustard cytosol 73.24 72.94
Solyc06g071620.2.1 Tomato nucleus 67.05 72.54
Bra020835.1-P Field mustard cytosol 68.52 71.54
CDY48648 Canola nucleus 33.73 71.43
AT2G42270.1 Thale cress cytosol 70.12 70.35
CDY31853 Canola nucleus 38.5 69.86
CDY01342 Canola cytosol 35.48 69.77
CDY22556 Canola cytosol 65.67 68.05
CDY56796 Canola cytosol 28.41 67.65
PGSC0003DMT400069435 Potato mitochondrion 7.25 67.52
CDY52687 Canola cytosol, mitochondrion 26.53 67.37
Bra008413.1-P Field mustard cytosol 28.64 66.67
CDY48646 Canola cytosol 9.73 65.23
CDY28773 Canola cytosol 9.73 65.23
CDY31854 Canola cytosol 9.73 65.23
CDY01343 Canola cytosol 9.73 65.23
Solyc06g065300.2.1 Tomato cytosol 17.9 59.18
CDX76356 Canola nucleus 10.28 56.57
CDY22275 Canola cytosol, nucleus, plasma membrane 27.54 56.55
TraesCS4B01G247900.1 Wheat mitochondrion, peroxisome 38.14 39.99
TraesCS6B01G147700.1 Wheat cytosol 3.26 39.66
TraesCS4B01G168700.1 Wheat nucleus 11.24 19.13
TraesCS2B01G179600.1 Wheat cytosol 8.21 17.79
TraesCS4B01G094600.1 Wheat nucleus 8.12 16.15
TraesCS6B01G161800.5 Wheat nucleus 9.78 15.57
TraesCS1B01G336400.1 Wheat plastid 13.63 14.27
TraesCS6B01G342300.1 Wheat plastid 7.57 13.73
CDY04587 Canola plastid 2.11 12.57
Protein Annotations
Gene3D:1.10.10.2530Gene3D:1.10.150.20Gene3D:1.10.3380.10MapMan:16.4.7.1.4Gene3D:2.60.40.150Gene3D:3.40.50.300
InterPro:AAA+_ATPaseInterPro:C2_domain_sfncoils:CoilInterPro:DEAD/DEAH_box_helicase_domGO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0005488GO:GO:0005524InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650
InterPro:IPR014001InterPro:IPR035892InterPro:Ig_E-setInterPro:P-loop_NTPasePFAM:PF00270PFAM:PF00271
PFAM:PF02889PIRSF:PIRSF039073PFscan:PS51192PFscan:PS51194PANTHER:PTHR24075PANTHER:PTHR24075:SF5
SMART:SM00382SMART:SM00487SMART:SM00490SMART:SM00973SUPFAM:SSF158702SUPFAM:SSF46785
SUPFAM:SSF52540SUPFAM:SSF81296InterPro:Sec63-domEnsemblPlantsGene:TraesCS6B01G034100EnsemblPlants:TraesCS6B01G034100.1InterPro:WH_DNA-bd_sf
TIGR:cd00046TIGR:cd00079SEG:seg:::
Description
No Description!
Coordinates
chr6B:+:20680043..20687663
Molecular Weight (calculated)
246797.0 Da
IEP (calculated)
5.886
GRAVY (calculated)
-0.368
Length
2179 amino acids
Sequence
(BLAST)
0001: MANLGGGAEA HARFKQYEYR ANSSLVLTTD SRPRDTHEPT GEPETLWGRI DKRSFGDRAV QAKPPELEDR LTKSRKKKER DAASAGGADA DADQPRKRRR
0101: RSSAAQREES VLSLADDVVY KPQTKETRAA YEAMLSVIQQ QFGGQPLDVL GGAADEVLAV LKNDKIKNPD KKKEIEKLLN PISSAMFDQF VSIGKLITDF
0201: HDASDPAAAP SGDGGDATMD DDIGVAVEFE EDEDDEESDF DQVQDDLDED DDDVAELNRP GGMQMGGELD DDDMQNSNEG LNINVQDIDA YWLQRKITQA
0301: YEDIDPQQSQ KLAEEILKII AVGDDRDVEN RLVMELDYEK FDLIKLVLRN RFKIVWCTRL ARAEDQEERK KIEEEMMDNP SLAPILEQLH ATRASAKERQ
0401: KNLEKSIRDE AKRLLNNDSA GADGPRERRA VERDTESGWL KGQRQLLDLD SLSFHQGGLL MANKKCELPE GSFRTPHKGY EEVHVPALKP RPYGTGEKIV
0501: KISDIPGWAQ PAFAGMQQLN RVQSKVYDTA LFKPDNILLC APTGAGKTNV AVLTILHQIG LHMKDGEFDN SKYKIVYVAP MKALVAEVVG NLSARLKDFN
0601: VNVRELSGDQ NLTKQQIDDT QIIVTTPEKW DIVTRKSGDR TYTQMVKLLI IDEIHLLHDN RGPVLESIVS RTVRQIETTK EHIRLVGLSA TLPNYEDVAV
0701: FLRVRSEGLF HFDNSYRPCP LAQQYIGITV RKPLQRFQLM NEICYEKVMA SAGKHQVLIF VHSRKETSKT ARAIRDTALA NDTLTRFLKD ESASQEILGS
0801: HTDIVKSSDL KDLLPYGFAI HHAGMARVDR ELVEELFADK HIQVLVSTAT LAWGVNLPAH TVIIKGTQIY NPEKGAWTEL SPLDVMQMLG RAGRPQYDTH
0901: GEGIILTGHS ELQYYLSLMN QQLPIESQFI SKLADQLNAE IVLGTIQNAR EACSWLGYTY LYIRMLRNPT LYGLPADIME TDKTLDERRA DLVHSAANLL
1001: DRNNLIKYDR KTGYFQVTDL GRIASYYYIS HGTISTYNEY LKPTMGDIEL CRLFSLSEEF KYVSVRQDEK MELAKLLDRV PIPVKESLEE PSAKINVLLQ
1101: AYISRLKLEG LSLGSDMVYI RQSAGRLLRA LFEIVLKRGW AQLAEKALNL CKMIDKQMWN VQTPLRQFPG IPKEILMKLE KKELAWERYY DLSSQEIGEL
1201: IRFQKMGKQL HRCIHQLPKL NLSAHVQPIT RTVLGFELTI TPDFLWDDKV HGYVEPFWVI VEDNDGEYIL HHEYFMLKKQ YVDEDHTLHF TVPIYEPLPP
1301: QYFIRVVSDK WLGSQTILPV CFRHLILPEK YAPPTELLDL QPLPVTALRN ARYEGLYSAF KHFNPIQTQV FTVLYNSDDS VLVAAPTGSG KTICAEFAIL
1401: RNHQKAVSGE TNMRVVYIAP IEALAKERYR DWSKKFGEFA RVVELTGETA ADLKLLDKGE IIISTPEKWD ALSRRWKQRK PVQQVSLFIV DELHLIGSEK
1501: GHVLEIVVSR MRRISSHIGS NIRIVALSAS LGNAKDLGEW IGATAHGLFN FPPAVRPVPL EIHIQGVDIA NFEARMQAMA KPTYTAITQH AKSGKPALVF
1601: VPTRKHARLT ALDLCAYSSA EGGGTPFLLG SQDEMDTFIG GVNEETLKNT LRCGVGYLHE GLSDLDQELV TQLFLGGRIQ VCVASSTMCW GRSLPAHLVV
1701: VMGTQYYDGR ESAHTDYPIT DLLQMMGHAS RPLQDNSGKC VILCHAPRKE YYKKFLFEAF PVESHLHHFL HDHMNAEVVV GVVENKQDAV DYLTWTFMYR
1801: RLNKNPNYYN LQGVSHRHLS DHLSELIETV LNDLESSKCV AVEEDMYLKP LNLGLIAAYY YISYTTIERF SSMLTQKTKM KGLLEILASA SEYAELPSRP
1901: GEEEYIERLV RHQRFSIDKP KYGDPHVKAN ALLQSHFARH TVVGNLAADQ REILLSAHRL LLAMVDVISS SGWLTLALNA MELSQMVTQG MWDRDSVLLQ
2001: LPHFTRDLAR RCQENEAKPI ESIFDLAEMS IDEMRDLLQL SNSELQDVVV FFKRFPNVDM TYEVREGDDI RAGDNVTLQV TLERDMTNLP NSEVGPVHAP
2101: RFPKTKEEGW WLVVGDSSTK QLLAIKRVTL QKRARVKLEF TAAAEPGTKD YMIYLMSDSY LGCDQEYEFT IDIKEAGGD
Best Arabidopsis Sequence Match ( AT1G20960.1 )
(BLAST)
0001: MANLGGGAEA HARFKQYEYR ANSSLVLTTD NRPRDTHEPT GEPETLWGKI DPRSFGDRVA KGRPQELEDK LKKSKKKERD VVDDMVNIRQ SKRRRLREES
0101: VLTDTDDAVY QPKTKETRAA YEAMLGLIQK QLGGQPPSIV SGAADEILAV LKNDAFRNPE KKMEIEKLLN KIENHEFDQL VSIGKLITDF QEGGDSGGGR
0201: ANDDEGLDDD LGVAVEFEEN EEDDEESDPD MVEEDDDEED DEPTRTGGMQ VDAGINDEDA GDANEGTNLN VQDIDAYWLQ RKISQAYEQQ IDPQQCQVLA
0301: EELLKILAEG DDRVVEDKLL MHLQYEKFSL VKFLLRNRLK VVWCTRLARA EDQEERNRIE EEMRGLGPEL TAIVEQLHAT RATAKEREEN LQKSINEEAR
0401: RLKDETGGDG GRGRRDVADR DSESGWVKGQ RQMLDLESLA FDQGGLLMAN KKCDLPPGSY RSHGKGYDEV HVPWVSKKVD RNEKLVKITE MPDWAQPAFK
0501: GMQQLNRVQS KVYDTALFKA ENILLCAPTG AGKTNVAMLT ILQQLEMNRN TDGTYNHGDY KIVYVAPMKA LVAEVVGNLS NRLKDYGVIV RELSGDQSLT
0601: GREIEETQII VTTPEKWDII TRKSGDRTYT QLVRLLIIDE IHLLHDNRGP VLESIVARTL RQIETTKENI RLVGLSATLP NYEDVALFLR VDLKKGLFKF
0701: DRSYRPVPLH QQYIGISVKK PLQRFQLMND LCYQKVLAGA GKHQVLIFVH SRKETSKTAR AIRDTAMAND TLSRFLKEDS VTRDVLHSHE DIVKNSDLKD
0801: ILPYGFAIHH AGLSRGDREI VETLFSQGHV QVLVSTATLA WGVNLPAHTV IIKGTQVYNP EKGAWMELSP LDVMQMLGRA GRPQYDQHGE GIIITGYSEL
0901: QYYLSLMNEQ LPIESQFISK LADQLNAEIV LGTVQNAREA CHWLGYTYLY IRMVRNPTLY GLAPDALAKD VVLEERRADL IHSAATILDK NNLVKYDRKS
1001: GYFQVTDLGR IASYYYITHG TIATYNEHLK PTMGDIDLYR LFSLSDEFKY VTVRQDEKME LAKLLDRVPI PIKETLEEPS AKINVLLQAY ISQLKLEGLS
1101: LTSDMVYITQ SAGRLVRALY EIVLKRGWAQ LAEKALNLSK MVGKRMWSVQ TPLRQFHGLS NDILMQLEKK DLVWERYYDL SAQELGELIR SPKMGKPLHK
1201: FIHQFPKVTL SAHVQPITRT VLNVELTVTP DFLWDEKIHK YVEPFWIIVE DNDGEKILHH EYFLLKKQYI DEDHTLHFTV PIFEPLPPQY FVRVVSDKWL
1301: GSETVLPVSF RHLILPEKYP PPTELLDLQP LPVTALRNPN YEILYQDFKH FNPVQTQVFT VLYNTNDNVL VAAPTGSGKT ICAEFAILRN HHEGPDATMR
1401: VVYIAPLEAI AKEQFRIWEG KFGKGLGLRV VELTGETALD LKLLEKGQII ISTPEKWDAL SRRWKQRKYV QQVSLFIVDE LHLIGGQHGP VLEVIVSRMR
1501: YISSQVINKI RIVALSTSLA NAKDLGEWIG ASSHGLFNFP PGVRPVPLEI HIQGVDISSF EARMQAMTKP TYTAIVQHAK NKKPAIVFVP TRKHVRLTAV
1601: DLMAYSHMDN PQSPDFLLGK LEELDPFVEQ IREETLKETL CHGIGYLHEG LSSLDQEIVT QLFEAGRIQV CVMSSSLCWG TPLTAHLVVV MGTQYYDGRE
1701: NSHSDYPVPD LLQMMGRASR PLLDNAGKCV IFCHAPRKEY YKKFLYEAFP VESQLQHFLH DNFNAEVVAG VIENKQDAVD YLTWTFMYRR LPQNPNYYNL
1801: QGVSHRHLSD HLSELVENTL SDLEASKCIE VEDEMELSPL NLGMIASYYY ISYTTIERFS SLLSSKTKMK GLLEILTSAS EYDMIPIRPG EEDTVRRLIN
1901: HQRFSFENPK CTDPHVKANA LLQAHFSRQN IGGNLAMDQR DVLLSATRLL QAMVDVISSN GWLNLALLAM EVSQMVTQGM WERDSMLLQL PHFTKDLAKR
2001: CQENPGKNIE TVFDLVEMED EERQELLKMS DAQLLDIARF CNRFPNIDLT YEIVGSEEVN PGKEVTLQVM LERDMEGRTE VGPVDSLRYP KTKEEGWWLV
2101: VGDTKTNQLL AIKRVSLQRK VKVKLDFTAP SEPGEKSYTL YFMCDSYLGC DQEYSFSVDV KGSGAGDRME E
Arabidopsis Description
BRR2ADExH-box ATP-dependent RNA helicase DExH12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYP1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.