Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G247900.1 | Wheat | mitochondrion, peroxisome | 48.04 | 4.14 |
| Os03t0213400-01 | Rice | cytosol, nucleus | 25.7 | 4.04 |
| TraesCS6B01G034100.1 | Wheat | cytosol | 39.66 | 3.26 |
| TraesCS7B01G103700.1 | Wheat | cytosol | 38.55 | 3.18 |
| TraesCS2B01G179600.1 | Wheat | cytosol | 15.08 | 2.68 |
| TraesCS4B01G168700.1 | Wheat | nucleus | 18.44 | 2.58 |
| TraesCS4B01G094600.1 | Wheat | nucleus | 15.64 | 2.55 |
| TraesCS6B01G161800.5 | Wheat | nucleus | 16.2 | 2.12 |
| TraesCS6B01G342300.1 | Wheat | plastid | 13.97 | 2.08 |
| TraesCS1B01G336400.1 | Wheat | plastid | 20.11 | 1.73 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G147700.1 | EnsemblPlantsGene:TraesCS6B01G147700 | Gene3D:3.40.50.300 | InterPro:ASC_dom_sf | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:P-loop_NTPase | PANTHER:PTHR24075 | PANTHER:PTHR24075:SF6 | PFAM:PF00271 | PFscan:PS51194 | SMART:SM00490 |
| SUPFAM:SSF160219 | SUPFAM:SSF52540 | TIGR:cd00079 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6B:+:148825817..148826736
Molecular Weight (calculated)
20227.1 Da
IEP (calculated)
6.797
GRAVY (calculated)
-0.494
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHRQGRDDH EGVQVVGFEV PSSPDSSYSN PIPGNKDEAR EPPLVPPHLQ HILLSFPPSH DDGRSLHLPS PTLYCSLQHP MRNQGLHHGG LNVRDRSLVE
101: ELFSNNKIQV LICTSTLAWG VNLPSHLFII KGTEYYGEKT KRYVDYVITD ILQMMGRAGR PQYDQHGKVV ILVHEPQLL
101: ELFSNNKIQV LICTSTLAWG VNLPSHLFII KGTEYYGEKT KRYVDYVITD ILQMMGRAGR PQYDQHGKVV ILVHEPQLL
0001: MVHNSPCNKH KTTSISWTRI LAGRCTGLFV QVSNRRRFRT QAIAFFLGEP TRGENTTEEK NPKRHKYRDF VMLVQLPRLT SSLREPFDID QAYLRRKTIL
0101: QTLNKPRSSG NRLDESDLAK RIVHQWEGAS LEVRQAYKQF IGAVVELIDR EVPSDEFREV AFSAYRLFNN PVEEDDSDIN DNISISGKKL ELQNLVGHAV
0201: SDANVKNVAS FAQALYSIQP THQSETYADE VNGGAEFGAD LVFNLPARFL VEASLDETGF VDVESNDAHT SFSEGWSGVS DTKNNLSAGK FNLSWLRDAC
0301: GRMVRETNSQ LSREELAMAI CRFLDSDKPG EEIAGDLLDL VGDGAFETVQ DLIMHRKEIV DAIHHGQMIL KSDKAASNTQ SRMPTYGTQV TVQTESAKQI
0401: EKLRRKEEKK NKRNADLGLE SEISEANFSS LLEASEKKTA FEDLIGSGEA NSLALALPQG TVRKHLKGYE EVFIPPTPTA QMKPGEKLIE IKELDDFAQA
0501: AFHGYKSLNR IQSRIFQTVY HTNENILVCA PTGAGKTNIA MISVLHEIKQ HFRDGYLHKN EFKIVYVAPM KALAAEVTSA FSRRLAPLNM VVKELTGDMQ
0601: LTKTELEETQ MIVTTPEKWD VITRKSSDMS MSMLVKLLII DEVHLLNDDR GAVIEALVAR TLRQVESTQT MIRIVGLSAT LPSYLQVAQF LRVNTDTGLF
0701: YFDSSYRPVP LAQQYIGITE HNFAARNELL NEICYKKVVD SIKQGHQAMI FVHSRKDTSK TAEKLVDLAR QYETLDLFTN ETHPQFQLMK KDVMKSRNKD
0801: LVKFFEAGFG IHHAGMLRSD RTLTERLFSD GLLKVLVCTA TLAWGVNLPA HTVVIKGTQL YDAKAGGWKD LGMLDVMQIF GRAGRPQFDK SGEGIIITSH
0901: DKLAYYLRLL TSQLPIESQF ISSLKDNLNA EVVLGTVTNV KEACAWLGYT YLSIRMKLNP LAYGIGWEEI IADPSLSLKQ RALVADAARS LDKAKMMRFD
1001: EKSGNFYCTE LGRVASHFYI QYSSVETYNE MLKRHMNESE IINMVAHSSE FENIVVREEE QHELETLARS CCPLEVKGGP SNKHGKISIL IQLYISRGSI
1101: DAFSLVSDAS YISASLARIM RALFEICLRK GWCEMTLFML EYCKAVDRQL WPHQHPLRQF ERDLPSDRRD DLDHLYEMEE KEIGALIRYN PGGRHLGYFP
1201: SIQLAATVSP ITRTVLKVDL LITPNFIWKD RFHGTALRWW ILIEDTENDY IYHSDLFTLT KRMARGEPQK LSFTVPIFEP HPPQYYVHAV SDSWLHAETY
1301: FTISFHNLAL PEARTSHTEL LDLKPLPVTS LGNKLYESLY KFSHFNPIQT QIFHVLYHTD NNVLVGAPTG SGKTISAELA MLRLFSTQPD MKVVYIAPLK
1401: AIVRERMNDW KKHLVAPLGK EMVEMTGDYT PDLVALLSAD IIISTPEKWD GISRNWHTRS YVKKVGLVIL DEIHLLGADR GPILEVIVSR MRYISSQTER
1501: SVRFVGLSTA LANAGDLADW LGVGEIGLFN FKPSVRPVPI EVHIQGYPGK YYCPRMNSMN KPAYAAICTH SPTKPVLIFV SSRRQTRLTA LDLIQFAASD
1601: EHPRQFLSVS EEDLQMVLSQ ITDQNLRHTL QFGIGLHHAG LNDHDRSAVE ELFTNNKIQV LVSTSTLAWG VNLPAHLVII KGTEYFDGKT KRYVDFPLTE
1701: ILQMMGRAGR PQFDQHGKAV ILVHEPKKSF YKKFLYEPFP VESSLKEKLH DHFNAEIVSG TIGNKEDAVH YLTWTYLFRR LMANPAYYGL EGTQDETICS
1801: YLSRLVQTTF EDLEDSGCLK VNEDSVEPTM LGTIASQYYL CYMTVSMFGS NIGPDTSLEA FLHILAGASE YDELPVRHNE ENYNKTLSDR VRYPVDNNHL
1901: DDPHVKANLL FQAHFSQLAL PISDYNTDLK SVLDQSIRIL QAMIDICANS GWLSSSLTCM RLLQMVMQGM WSDQDSSLWM IPCMNDLLLG SLTARGIHTL
2001: HQLLNLPRET LQSVTENFPA SRLSQDLQRF PRIQMNVRLQ KKDSDGKKKP STLEIRLEKT SKRNSSRALA PRFPKVKDEA WWLVLGDTST SELFAVKRVS
2101: FTGRLITRME LPPNITSFQD TKLILVSDCY LGFEQEHSIE QLARRG
0101: QTLNKPRSSG NRLDESDLAK RIVHQWEGAS LEVRQAYKQF IGAVVELIDR EVPSDEFREV AFSAYRLFNN PVEEDDSDIN DNISISGKKL ELQNLVGHAV
0201: SDANVKNVAS FAQALYSIQP THQSETYADE VNGGAEFGAD LVFNLPARFL VEASLDETGF VDVESNDAHT SFSEGWSGVS DTKNNLSAGK FNLSWLRDAC
0301: GRMVRETNSQ LSREELAMAI CRFLDSDKPG EEIAGDLLDL VGDGAFETVQ DLIMHRKEIV DAIHHGQMIL KSDKAASNTQ SRMPTYGTQV TVQTESAKQI
0401: EKLRRKEEKK NKRNADLGLE SEISEANFSS LLEASEKKTA FEDLIGSGEA NSLALALPQG TVRKHLKGYE EVFIPPTPTA QMKPGEKLIE IKELDDFAQA
0501: AFHGYKSLNR IQSRIFQTVY HTNENILVCA PTGAGKTNIA MISVLHEIKQ HFRDGYLHKN EFKIVYVAPM KALAAEVTSA FSRRLAPLNM VVKELTGDMQ
0601: LTKTELEETQ MIVTTPEKWD VITRKSSDMS MSMLVKLLII DEVHLLNDDR GAVIEALVAR TLRQVESTQT MIRIVGLSAT LPSYLQVAQF LRVNTDTGLF
0701: YFDSSYRPVP LAQQYIGITE HNFAARNELL NEICYKKVVD SIKQGHQAMI FVHSRKDTSK TAEKLVDLAR QYETLDLFTN ETHPQFQLMK KDVMKSRNKD
0801: LVKFFEAGFG IHHAGMLRSD RTLTERLFSD GLLKVLVCTA TLAWGVNLPA HTVVIKGTQL YDAKAGGWKD LGMLDVMQIF GRAGRPQFDK SGEGIIITSH
0901: DKLAYYLRLL TSQLPIESQF ISSLKDNLNA EVVLGTVTNV KEACAWLGYT YLSIRMKLNP LAYGIGWEEI IADPSLSLKQ RALVADAARS LDKAKMMRFD
1001: EKSGNFYCTE LGRVASHFYI QYSSVETYNE MLKRHMNESE IINMVAHSSE FENIVVREEE QHELETLARS CCPLEVKGGP SNKHGKISIL IQLYISRGSI
1101: DAFSLVSDAS YISASLARIM RALFEICLRK GWCEMTLFML EYCKAVDRQL WPHQHPLRQF ERDLPSDRRD DLDHLYEMEE KEIGALIRYN PGGRHLGYFP
1201: SIQLAATVSP ITRTVLKVDL LITPNFIWKD RFHGTALRWW ILIEDTENDY IYHSDLFTLT KRMARGEPQK LSFTVPIFEP HPPQYYVHAV SDSWLHAETY
1301: FTISFHNLAL PEARTSHTEL LDLKPLPVTS LGNKLYESLY KFSHFNPIQT QIFHVLYHTD NNVLVGAPTG SGKTISAELA MLRLFSTQPD MKVVYIAPLK
1401: AIVRERMNDW KKHLVAPLGK EMVEMTGDYT PDLVALLSAD IIISTPEKWD GISRNWHTRS YVKKVGLVIL DEIHLLGADR GPILEVIVSR MRYISSQTER
1501: SVRFVGLSTA LANAGDLADW LGVGEIGLFN FKPSVRPVPI EVHIQGYPGK YYCPRMNSMN KPAYAAICTH SPTKPVLIFV SSRRQTRLTA LDLIQFAASD
1601: EHPRQFLSVS EEDLQMVLSQ ITDQNLRHTL QFGIGLHHAG LNDHDRSAVE ELFTNNKIQV LVSTSTLAWG VNLPAHLVII KGTEYFDGKT KRYVDFPLTE
1701: ILQMMGRAGR PQFDQHGKAV ILVHEPKKSF YKKFLYEPFP VESSLKEKLH DHFNAEIVSG TIGNKEDAVH YLTWTYLFRR LMANPAYYGL EGTQDETICS
1801: YLSRLVQTTF EDLEDSGCLK VNEDSVEPTM LGTIASQYYL CYMTVSMFGS NIGPDTSLEA FLHILAGASE YDELPVRHNE ENYNKTLSDR VRYPVDNNHL
1901: DDPHVKANLL FQAHFSQLAL PISDYNTDLK SVLDQSIRIL QAMIDICANS GWLSSSLTCM RLLQMVMQGM WSDQDSSLWM IPCMNDLLLG SLTARGIHTL
2001: HQLLNLPRET LQSVTENFPA SRLSQDLQRF PRIQMNVRLQ KKDSDGKKKP STLEIRLEKT SKRNSSRALA PRFPKVKDEA WWLVLGDTST SELFAVKRVS
2101: FTGRLITRME LPPNITSFQD TKLILVSDCY LGFEQEHSIE QLARRG
Arabidopsis Description
BRR2CDExH-box ATP-dependent RNA helicase DExH14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNQ1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.