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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G238700.1 Wheat cytosol 93.87 96.35
TraesCS7D01G199800.1 Wheat cytosol 68.31 95.86
HORVU7Hr1G040480.2 Barley cytosol, mitochondrion 92.39 93.16
EER99779 Sorghum cytosol 83.3 82.77
TraesCS6B01G034100.1 Wheat cytosol 82.98 82.56
Zm00001d022286_P003 Maize plastid 82.89 82.28
EES04337 Sorghum cytosol 80.81 80.63
Os03t0743800-00 Rice nucleus 76.25 77.1
KXG37223 Sorghum cytosol 77.35 76.09
GSMUA_Achr3P29700_001 Banana cytosol 63.75 75.11
VIT_05s0102g00480.t01 Wine grape cytosol 68.96 72.33
PGSC0003DMT400078069 Potato cytosol 71.22 71.02
KRH13647 Soybean cytosol 71.49 71.0
KRH43818 Soybean nucleus 71.45 70.96
CDX76355 Canola cytosol 42.2 70.55
Solyc06g082100.2.1 Tomato nucleus 63.88 70.45
AT1G20960.1 Thale cress cytosol 68.36 68.26
Solyc06g071620.2.1 Tomato nucleus 63.01 67.83
Bra012260.1-P Field mustard cytosol 68.17 67.61
Bra020835.1-P Field mustard cytosol 64.94 67.47
Bra022718.1-P Field mustard cytosol 68.04 67.41
AT2G42270.1 Thale cress cytosol 65.91 65.79
CDY48648 Canola nucleus 30.86 65.01
CDY56796 Canola cytosol 27.4 64.92
CDY22556 Canola cytosol 62.59 64.53
CDY31853 Canola nucleus 35.61 64.28
CDY52687 Canola cytosol, mitochondrion 25.32 63.99
CDY01342 Canola cytosol 32.66 63.9
PGSC0003DMT400069435 Potato mitochondrion 6.87 63.68
Bra008413.1-P Field mustard cytosol 27.35 63.35
CDY28773 Canola cytosol 8.86 59.08
CDY01343 Canola cytosol 8.86 59.08
CDY48646 Canola cytosol 8.86 59.08
CDY31854 Canola cytosol 8.86 59.08
Solyc06g065300.2.1 Tomato cytosol 16.93 55.69
CDY22275 Canola cytosol, nucleus, plasma membrane 26.66 54.48
CDX76356 Canola nucleus 9.18 50.25
TraesCS6B01G147700.1 Wheat cytosol 3.18 38.55
TraesCS4B01G247900.1 Wheat mitochondrion, peroxisome 36.58 38.16
TraesCS4B01G168700.1 Wheat nucleus 11.21 18.97
TraesCS2B01G179600.1 Wheat cytosol 8.12 17.5
TraesCS4B01G094600.1 Wheat nucleus 7.93 15.69
TraesCS6B01G161800.5 Wheat nucleus 9.46 14.99
TraesCS1B01G336400.1 Wheat plastid 13.56 14.12
TraesCS6B01G342300.1 Wheat plastid 7.15 12.9
CDY04587 Canola plastid 2.12 12.57
Protein Annotations
Gene3D:1.10.10.2530Gene3D:1.10.150.20Gene3D:1.10.3380.10MapMan:16.4.7.1.4Gene3D:2.60.40.150Gene3D:3.40.50.300
InterPro:AAA+_ATPaseInterPro:C2_domain_sfncoils:CoilInterPro:DEAD/DEAH_box_helicase_domGO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0005488GO:GO:0005524InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650
InterPro:IPR014001InterPro:IPR035892InterPro:Ig_E-setInterPro:P-loop_NTPasePFAM:PF00270PFAM:PF00271
PFAM:PF02889PIRSF:PIRSF039073PFscan:PS51192PFscan:PS51194PANTHER:PTHR24075PANTHER:PTHR24075:SF5
SMART:SM00382SMART:SM00487SMART:SM00490SMART:SM00973SUPFAM:SSF158702SUPFAM:SSF46785
SUPFAM:SSF52540SUPFAM:SSF81296InterPro:Sec63-domEnsemblPlantsGene:TraesCS7B01G103700EnsemblPlants:TraesCS7B01G103700.1InterPro:WH_DNA-bd_sf
TIGR:cd00046TIGR:cd00079SEG:seg:::
Description
No Description!
Coordinates
chr7B:-:119203571..119211146
Molecular Weight (calculated)
245458.0 Da
IEP (calculated)
6.355
GRAVY (calculated)
-0.331
Length
2168 amino acids
Sequence
(BLAST)
0001: MESPGGGAEA RARSRQYDYG ANTNLVVNTG SRPRGAHHEP TGEPQTLSGR IRARSFGDRA VRAKPPGLEE KRGRSRGKTA RDAASADLPH RDAKRMRRGS
0101: VRHEDSVLSL AHDALYKPRT RATRTAYEAL LSVIQQQLGG QPLDVLGDAA DEVLAVLKDD RTRNPDKKKV IEKLINPVSG QMFHQLVSIG KLITDFHDAV
0201: DSAGVPSVDG TDMPLDDDIG ITVEFEEDED EESNLYQVQD ELDDENEDDF VELNVPGTMQ TNGELYDDDM QSCNKGPTLD VQDIDAYWLQ RKISQAYEDI
0301: DPQRSQKLAE EILKVIAEGD DRDVENRLVT LLDYENFDLI KLLLHNRLKI VWCTFLARAE DQEQRKKIAE EMMSNPRLAP ILEQLHATRA SAKERQKNLE
0401: RSIRDEAKRL LNNDSAGTDG ARDSKTVDIK SGWFKGQRQL LDLDNLSFHQ GSLLMSNKKC ELPPGSFRTP QRGYEEVHVP ALRPMPYESS EKIVKISDMP
0501: EWARPAFAGM TQLNRVQSKV YDTALYKPDN ILLCAPTGAG KTNVAVLTIL QQIGLHMKDG KFDNTKYKIV YVAPMKALVA EVVGNLSARL KEYNVTVSEL
0601: SGDQNLTKQQ IDETQIIVTT PEKWDIVTRK SGDRIYTQMV KLLIIDEIHL LHDNRGPVLE SIVSGTVRQI ETTKEHIRLV GLSATLPNYE DIAVFLRVRS
0701: DGLFHFDNSY RPCPLAQQYI GITAKKPLQR FQLMNEICYE KVMAAAGKHQ VLIFVHSRKE TAQTARAIRD TALANDVLPR FLKDDSASQE ILCAHAELVK
0801: SSDLKDLLPY GFAIHHAGLA RVDRELVEKL FVDKHIQVLI STATLAWGVN LPAHTVIIKG TQIYNSEKGT WTELSPLDAM QMLGRAGRPQ YDTHGEGIIL
0901: TSHSELQYYP ALMNQQLPIE SQFISKLADQ LNAEIVLGTV QNAQEACSWL GYTYLYIRML RTPTLYGLPE DIMERDRTLD ERRADLVHSA ANLLDRNNLI
1001: KYDKKTGYFQ ATDLGRISSY YYISHRTIST YNEYLKPTMG YIELCQLFSL SEEFKYVSVR KDEKMELEKL LDRVPIPVKE SLEEPSTKIN VLLQAYISGL
1101: KLEGLSLGSD MIYIKQSAGR LSRAIFEIVL KRGWSQLAEK ALNLCTMIDK QMWSVQNPLR QFPGIPNEIL MKLEKKELAW ERYFDLSSQE IGELIRYPKM
1201: GRRLHQCIHQ LPKLNLSSHV QPITRTVLGF ELTLTADFQW DDKIHGYVEP FWILVEDNDS ECILHHEYFM LKKQWLNEDH TLNFTVPIYE PLPPLYFIHV
1301: VSDKWLGSRT ILPVSFRHLV LPDKHAPPTE LLDLQPLPVT ALRNARYEGL YSAWKHFNPI QTQVFSVLYN SDDSVLVAAP TGSGKTICAE FAILRNHQTA
1401: VSSETNMRIV YIAPIEALAK ERYRDWEMKF GEFARVVELT GETARDLKLL DKGEIIISTP EKWDSLSRRW KQRKHIQQVS LFIVDELHLI GSEKGHVLDI
1501: IVSRMRRIAN HTCSNIRIVA LSASLANAKD LGEWIGATSH GLFNFPPAVR PVPLEIHIQG VDIANFEARM QAMAKPTYNA IRQHAKHGKP ALVFVPAMKH
1601: ARFTALDLCA YSNAEGCGTP FLLGSEDEID TYTRGVNEET LVNTLKCGVG YLHEALSDLD QEVVTQLFLC GKIQVCVVSS TMCWGRSLPS HLVVVMGTQY
1701: SDGWGSVTDY PVSDLLQMMG HASRPLQDNS GKCVILCHAP RKEYCRKFLS EAFPVESHLH HNLHDHMNAE VVCGVVENKQ AAVDYLTWTF MYRRLTKNPN
1801: YYNLQGTGHR HVSDHLSELV ETVLDDLESS KCVVIEEDTY LKPLNLGLIA SYYYISYKTI ERFSSMITRK TKMKGLLEIL ASSSEYAELP SCRGEEESIE
1901: TLVRHQRFSG ENSKNYDVHV KANALLQAHF SRQTAVRNLA ADQREILLPA PRLIKSLVDV ISSNGWLSLA LKAMELSQMV TQGMWDRDSV LLQLPHFTKE
2001: LTGRCQENGI ENIFDLAEMS ADKMQNLLQL PNSQLKDIIG FVKRFPDIEM AYEVLEGDDI RASGNVTLQV TLERDMTNLP SEVGPVHAPR YPKPRLEGWW
2101: LLIGDSSSDQ LLAIKWVAVL QRARLKLEFI APAEAGKKDF MVFLMSDSYL GIDQEYVFTV NVKDAGGD
Best Arabidopsis Sequence Match ( AT1G20960.1 )
(BLAST)
0001: MANLGGGAEA HARFKQYEYR ANSSLVLTTD NRPRDTHEPT GEPETLWGKI DPRSFGDRVA KGRPQELEDK LKKSKKKERD VVDDMVNIRQ SKRRRLREES
0101: VLTDTDDAVY QPKTKETRAA YEAMLGLIQK QLGGQPPSIV SGAADEILAV LKNDAFRNPE KKMEIEKLLN KIENHEFDQL VSIGKLITDF QEGGDSGGGR
0201: ANDDEGLDDD LGVAVEFEEN EEDDEESDPD MVEEDDDEED DEPTRTGGMQ VDAGINDEDA GDANEGTNLN VQDIDAYWLQ RKISQAYEQQ IDPQQCQVLA
0301: EELLKILAEG DDRVVEDKLL MHLQYEKFSL VKFLLRNRLK VVWCTRLARA EDQEERNRIE EEMRGLGPEL TAIVEQLHAT RATAKEREEN LQKSINEEAR
0401: RLKDETGGDG GRGRRDVADR DSESGWVKGQ RQMLDLESLA FDQGGLLMAN KKCDLPPGSY RSHGKGYDEV HVPWVSKKVD RNEKLVKITE MPDWAQPAFK
0501: GMQQLNRVQS KVYDTALFKA ENILLCAPTG AGKTNVAMLT ILQQLEMNRN TDGTYNHGDY KIVYVAPMKA LVAEVVGNLS NRLKDYGVIV RELSGDQSLT
0601: GREIEETQII VTTPEKWDII TRKSGDRTYT QLVRLLIIDE IHLLHDNRGP VLESIVARTL RQIETTKENI RLVGLSATLP NYEDVALFLR VDLKKGLFKF
0701: DRSYRPVPLH QQYIGISVKK PLQRFQLMND LCYQKVLAGA GKHQVLIFVH SRKETSKTAR AIRDTAMAND TLSRFLKEDS VTRDVLHSHE DIVKNSDLKD
0801: ILPYGFAIHH AGLSRGDREI VETLFSQGHV QVLVSTATLA WGVNLPAHTV IIKGTQVYNP EKGAWMELSP LDVMQMLGRA GRPQYDQHGE GIIITGYSEL
0901: QYYLSLMNEQ LPIESQFISK LADQLNAEIV LGTVQNAREA CHWLGYTYLY IRMVRNPTLY GLAPDALAKD VVLEERRADL IHSAATILDK NNLVKYDRKS
1001: GYFQVTDLGR IASYYYITHG TIATYNEHLK PTMGDIDLYR LFSLSDEFKY VTVRQDEKME LAKLLDRVPI PIKETLEEPS AKINVLLQAY ISQLKLEGLS
1101: LTSDMVYITQ SAGRLVRALY EIVLKRGWAQ LAEKALNLSK MVGKRMWSVQ TPLRQFHGLS NDILMQLEKK DLVWERYYDL SAQELGELIR SPKMGKPLHK
1201: FIHQFPKVTL SAHVQPITRT VLNVELTVTP DFLWDEKIHK YVEPFWIIVE DNDGEKILHH EYFLLKKQYI DEDHTLHFTV PIFEPLPPQY FVRVVSDKWL
1301: GSETVLPVSF RHLILPEKYP PPTELLDLQP LPVTALRNPN YEILYQDFKH FNPVQTQVFT VLYNTNDNVL VAAPTGSGKT ICAEFAILRN HHEGPDATMR
1401: VVYIAPLEAI AKEQFRIWEG KFGKGLGLRV VELTGETALD LKLLEKGQII ISTPEKWDAL SRRWKQRKYV QQVSLFIVDE LHLIGGQHGP VLEVIVSRMR
1501: YISSQVINKI RIVALSTSLA NAKDLGEWIG ASSHGLFNFP PGVRPVPLEI HIQGVDISSF EARMQAMTKP TYTAIVQHAK NKKPAIVFVP TRKHVRLTAV
1601: DLMAYSHMDN PQSPDFLLGK LEELDPFVEQ IREETLKETL CHGIGYLHEG LSSLDQEIVT QLFEAGRIQV CVMSSSLCWG TPLTAHLVVV MGTQYYDGRE
1701: NSHSDYPVPD LLQMMGRASR PLLDNAGKCV IFCHAPRKEY YKKFLYEAFP VESQLQHFLH DNFNAEVVAG VIENKQDAVD YLTWTFMYRR LPQNPNYYNL
1801: QGVSHRHLSD HLSELVENTL SDLEASKCIE VEDEMELSPL NLGMIASYYY ISYTTIERFS SLLSSKTKMK GLLEILTSAS EYDMIPIRPG EEDTVRRLIN
1901: HQRFSFENPK CTDPHVKANA LLQAHFSRQN IGGNLAMDQR DVLLSATRLL QAMVDVISSN GWLNLALLAM EVSQMVTQGM WERDSMLLQL PHFTKDLAKR
2001: CQENPGKNIE TVFDLVEMED EERQELLKMS DAQLLDIARF CNRFPNIDLT YEIVGSEEVN PGKEVTLQVM LERDMEGRTE VGPVDSLRYP KTKEEGWWLV
2101: VGDTKTNQLL AIKRVSLQRK VKVKLDFTAP SEPGEKSYTL YFMCDSYLGC DQEYSFSVDV KGSGAGDRME E
Arabidopsis Description
BRR2ADExH-box ATP-dependent RNA helicase DExH12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYP1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.