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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G199800.1 Wheat cytosol 67.02 93.27
TraesCS7B01G103700.1 Wheat cytosol 93.16 92.39
TraesCS7A01G238700.1 Wheat cytosol 90.51 92.14
EER99779 Sorghum cytosol 82.51 81.3
Zm00001d022286_P003 Maize plastid 82.42 81.14
HORVU6Hr1G004350.3 Barley cytosol, mitochondrion, nucleus 82.47 80.96
EES04337 Sorghum cytosol 79.91 79.06
Os03t0743800-00 Rice nucleus 75.72 75.93
KXG37223 Sorghum cytosol 77.07 75.18
GSMUA_Achr3P29700_001 Banana cytosol 63.12 73.75
VIT_05s0102g00480.t01 Wine grape cytosol 68.47 71.21
CDX76355 Canola cytosol 42.33 70.16
PGSC0003DMT400078069 Potato cytosol 70.74 69.96
KRH13647 Soybean cytosol 70.88 69.81
KRH43818 Soybean nucleus 70.79 69.72
Solyc06g082100.2.1 Tomato nucleus 63.53 69.48
AT1G20960.1 Thale cress cytosol 68.23 67.57
Bra020835.1-P Field mustard cytosol 65.49 67.47
Solyc06g071620.2.1 Tomato nucleus 63.12 67.38
Bra012260.1-P Field mustard cytosol 67.72 66.61
Bra022718.1-P Field mustard cytosol 67.77 66.59
AT2G42270.1 Thale cress cytosol 65.77 65.1
CDY52687 Canola cytosol, mitochondrion 25.72 64.45
CDY56796 Canola cytosol 27.35 64.26
CDY31853 Canola nucleus 35.58 63.7
CDY22556 Canola cytosol 62.28 63.67
CDY48648 Canola nucleus 30.28 63.27
Bra008413.1-P Field mustard cytosol 27.44 63.03
CDY01342 Canola cytosol 32.05 62.18
PGSC0003DMT400069435 Potato mitochondrion 6.74 61.97
CDY01343 Canola cytosol 8.93 59.08
CDY48646 Canola cytosol 8.93 59.08
CDY31854 Canola cytosol 8.93 59.08
CDY28773 Canola cytosol 8.93 59.08
Solyc06g065300.2.1 Tomato cytosol 17.02 55.54
CDY22275 Canola cytosol, nucleus, plasma membrane 26.6 53.91
CDX76356 Canola nucleus 9.4 51.01
HORVU4Hr1G068170.2 Barley cytosol, nucleus 36.47 37.53
HORVU4Hr1G049830.57 Barley nucleus 10.93 20.94
HORVU2Hr1G028060.7 Barley cytosol 8.19 17.5
HORVU1Hr1G048420.1 Barley cytosol 0.65 17.07
HORVU7Hr1G001080.1 Barley cytosol, nucleus, plastid 8.19 16.91
HORVU4Hr1G018990.9 Barley plastid 8.14 16.88
HORVU6Hr1G025670.1 Barley nucleus 9.58 15.07
HORVU1Hr1G065680.1 Barley nucleus 10.93 13.87
HORVU0Hr1G026710.1 Barley plastid 12.14 13.54
HORVU1Hr1G018080.31 Barley cytosol, nucleus, plastid 1.77 13.01
HORVU6Hr1G076860.2 Barley plastid 7.21 12.96
CDY04587 Canola plastid 2.09 12.3
Protein Annotations
Gene3D:1.10.10.2530Gene3D:1.10.150.20Gene3D:1.10.3380.10MapMan:16.4.7.1.4Gene3D:2.60.40.150Gene3D:3.40.50.300
UniProt:A0A287W687InterPro:AAA+_ATPaseInterPro:C2_domain_sfncoils:CoilInterPro:DEAD/DEAH_box_helicase_domGO:GO:0000166
GO:GO:0003674GO:GO:0003676GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:HORVU7Hr1G040480EnsemblPlants:HORVU7Hr1G040480.2
InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650InterPro:IPR014001InterPro:IPR035892InterPro:Ig_E-set
InterPro:P-loop_NTPasePFAM:PF00270PFAM:PF00271PFAM:PF02889PIRSF:PIRSF039073PFscan:PS51192
PFscan:PS51194PANTHER:PTHR24075PANTHER:PTHR24075:SF5SMART:SM00382SMART:SM00487SMART:SM00490
SMART:SM00973SUPFAM:SSF158702SUPFAM:SSF46785SUPFAM:SSF52540SUPFAM:SSF81296InterPro:Sec63-dom
UniParc:UPI000B4698E6InterPro:WH_DNA-bd_sfSEG:seg:::
Description
No Description!
Coordinates
chrchr7H:+:109758662..109766651
Molecular Weight (calculated)
242653.0 Da
IEP (calculated)
6.478
GRAVY (calculated)
-0.295
Length
2150 amino acids
Sequence
(BLAST)
0001: NLVVNTGSRP RGAHHEPTGE PQTLSGRIRA SSFGDRAVRA RPPGLEEKRG GSLGKKARGA AVSADLPRRD AKRMRRAASA RPEDSVLSLA HDALYKPRTR
0101: ETRTAYEALL GVIQQQLGGQ PLDVLGDAAD EVLAVLKDDR IRNPDKKKGI EKLINPVSDL MFHQLVSIGK LITDFHDAVA GNSAGVPSGD GTDMPLGDDI
0201: GITVEFEEDE DDKEHSLYQV QDELDDENED DIVELNVPRA MQTDGELYDD DKQSCNKGLT LDVQDIDAYW LQRKISQAYE NIDPQHSQKL AEEILKVIAE
0301: GDDRDVENQL VMLLDYENFD LIKLLLHNRL KIVWCTFLAR AEDQEQRKKI AEEMMSNPRL APILEQLQAT RASAKDRQKN LERSIRDEAK RLLNNDSAGT
0401: DGARDSKAVD IKSGWLKGQR QLLDLDNLSF HQGSLLMSNK KCELPPGSFR TPQRGYEEVH VPALRPMPYE STEKTVKISD MPAWARPAFA GMTQLNRVQS
0501: KVYDTALYKP DNILLCAPTG AGKTNVAVLT ILQQIGLHMK DGEFDNTKYK IVYVAPMKAL VAEIVGNLSA RLKEYNVTVS ELSGDQNLTK QQIDETHIIV
0601: TTPEKWDIVT RKSGDRIYTQ MVKLLIIDEI HLLHDNRGPV LESIVSRTVR QIETTKEHIR LVGLSATLPN YEDIAVFLRV RSDGLFHFDN SYRPCPLAQQ
0701: YIGITSKKPL QRFQLMNEIC YEKVMAAAGK HQVLIFVHSR KETAQTARAI RDTALANDVL AHFLKDDSAS QEILCAHAEL VKSSDLKDLL PYGFAIHHAG
0801: LARVDRELVE KLFVDKHIQV LISTATLAWG VNLPAHTVII KGTQIYNSEK GAWTELSPLD VMQMLGRAGR PQYDTHGEGI ILTSHSELQY YLSLMNQQLP
0901: IESQFISKLA DQLNAEIVLG TIQXXXXACS WIGYTYLYIR MLRNPTLYGL PEDIMERDRT LDERRADLVH SAANLLDRNN LIKYDKRTGY FQATELGRIS
1001: SYYYISHRTI STYNEYLKPT MGYIELCQLF SLSEEFKYVT VRKDEKMELE KLLGRVPIPV KESLEEPSTK INVLLQAYIS GLKLEGLSLG SDMVYIKQSA
1101: GRLSRAIFEI VLKRGWSQLA EKALNLCTMI DKQMWSVQTP LRQFPGIPNE ILMKLEKKEL AWERYFDLSS QEIGELIRYP KMGRRLHQCI HQLPKLNLSA
1201: HVQPITSTVL GFELTLTPDF QWDDKIHGYV EPFWILVEDN DSECILHHEY FMLKKQWLNE DHTLTFIVPI FEPLPPLYFI HVVSDKWLGS RTILPVSFRH
1301: LVLPEKHAPP TELLDLQPLP VTALRNARYE GLYSGWKHFN PIQTQVFNVL YNSDDSVLVA APTGSGKTIC AEFAILRNHQ KAVSGETNMR IVYIAPIEAL
1401: AKERYRDWKM KFGELACVVE LTGETAPDLK LLDKGEIIIS TPEKWDALSR RWKQRKHIQQ VSLFIVDELH LIGSEKGHVL DIVVSRMRRI ANHICSNIRI
1501: VALSASLANA KDLGEWIGAT SHGLFNFPPA VRPVPLEIHI QGVDIANFEA RTQAMAKPTY NAIRQHAKHG KPAVVFVPTV KHARFTALDL CAYSKSEDCG
1601: TPFLLGSEDE MDTYTTGVNE ETLVNTLKCG VGYLHDALCD LDQEVVTQLF LCGKIQVCVV SSTMCWGRSL PSHLVVVMGT QYSDGRGGVT DYPFTDLLQM
1701: TGHASRPLQD NAGKCVIFCH APRKEYYRKF LSEAFPVESH LHHNLHDHMN GQVVCGVVQN KQAAVDYLTW TFMYRRLTKN PNYYNLQGTG HRHVSDHLSE
1801: LVETVLDDLE SSKCVVIEED TYLKPLNLGL IASYYYISYK TIERFSLMLT RKTKMKGLLE ILASASEYAE LSSCRGEEES IERLVRHQRF CAENSKNHDV
1901: HVKANALLQA HFSRQVVVGN LAADQREMLV PAPRLIKSLV DVISSNGWLS LALNAMELSQ MVTQGMWDRD SVLFQLPHFT KELTGRCQEN GIESIFDLAD
2001: MSADKMQNLL QLTNSQFKDI IGFIKRFPNI EIAYEVREGD YVRPGGKVSL QVTLERDMIN LPSEVGPVHA PRYPKPRQEG WWLVIGDSSS DQLLAIKWVA
2101: LQQRACLMLE FIAPAEAGKK DYMVFLMSDS YLGCDQEYEF TVNVKDAGGD
Best Arabidopsis Sequence Match ( AT1G20960.1 )
(BLAST)
0001: MANLGGGAEA HARFKQYEYR ANSSLVLTTD NRPRDTHEPT GEPETLWGKI DPRSFGDRVA KGRPQELEDK LKKSKKKERD VVDDMVNIRQ SKRRRLREES
0101: VLTDTDDAVY QPKTKETRAA YEAMLGLIQK QLGGQPPSIV SGAADEILAV LKNDAFRNPE KKMEIEKLLN KIENHEFDQL VSIGKLITDF QEGGDSGGGR
0201: ANDDEGLDDD LGVAVEFEEN EEDDEESDPD MVEEDDDEED DEPTRTGGMQ VDAGINDEDA GDANEGTNLN VQDIDAYWLQ RKISQAYEQQ IDPQQCQVLA
0301: EELLKILAEG DDRVVEDKLL MHLQYEKFSL VKFLLRNRLK VVWCTRLARA EDQEERNRIE EEMRGLGPEL TAIVEQLHAT RATAKEREEN LQKSINEEAR
0401: RLKDETGGDG GRGRRDVADR DSESGWVKGQ RQMLDLESLA FDQGGLLMAN KKCDLPPGSY RSHGKGYDEV HVPWVSKKVD RNEKLVKITE MPDWAQPAFK
0501: GMQQLNRVQS KVYDTALFKA ENILLCAPTG AGKTNVAMLT ILQQLEMNRN TDGTYNHGDY KIVYVAPMKA LVAEVVGNLS NRLKDYGVIV RELSGDQSLT
0601: GREIEETQII VTTPEKWDII TRKSGDRTYT QLVRLLIIDE IHLLHDNRGP VLESIVARTL RQIETTKENI RLVGLSATLP NYEDVALFLR VDLKKGLFKF
0701: DRSYRPVPLH QQYIGISVKK PLQRFQLMND LCYQKVLAGA GKHQVLIFVH SRKETSKTAR AIRDTAMAND TLSRFLKEDS VTRDVLHSHE DIVKNSDLKD
0801: ILPYGFAIHH AGLSRGDREI VETLFSQGHV QVLVSTATLA WGVNLPAHTV IIKGTQVYNP EKGAWMELSP LDVMQMLGRA GRPQYDQHGE GIIITGYSEL
0901: QYYLSLMNEQ LPIESQFISK LADQLNAEIV LGTVQNAREA CHWLGYTYLY IRMVRNPTLY GLAPDALAKD VVLEERRADL IHSAATILDK NNLVKYDRKS
1001: GYFQVTDLGR IASYYYITHG TIATYNEHLK PTMGDIDLYR LFSLSDEFKY VTVRQDEKME LAKLLDRVPI PIKETLEEPS AKINVLLQAY ISQLKLEGLS
1101: LTSDMVYITQ SAGRLVRALY EIVLKRGWAQ LAEKALNLSK MVGKRMWSVQ TPLRQFHGLS NDILMQLEKK DLVWERYYDL SAQELGELIR SPKMGKPLHK
1201: FIHQFPKVTL SAHVQPITRT VLNVELTVTP DFLWDEKIHK YVEPFWIIVE DNDGEKILHH EYFLLKKQYI DEDHTLHFTV PIFEPLPPQY FVRVVSDKWL
1301: GSETVLPVSF RHLILPEKYP PPTELLDLQP LPVTALRNPN YEILYQDFKH FNPVQTQVFT VLYNTNDNVL VAAPTGSGKT ICAEFAILRN HHEGPDATMR
1401: VVYIAPLEAI AKEQFRIWEG KFGKGLGLRV VELTGETALD LKLLEKGQII ISTPEKWDAL SRRWKQRKYV QQVSLFIVDE LHLIGGQHGP VLEVIVSRMR
1501: YISSQVINKI RIVALSTSLA NAKDLGEWIG ASSHGLFNFP PGVRPVPLEI HIQGVDISSF EARMQAMTKP TYTAIVQHAK NKKPAIVFVP TRKHVRLTAV
1601: DLMAYSHMDN PQSPDFLLGK LEELDPFVEQ IREETLKETL CHGIGYLHEG LSSLDQEIVT QLFEAGRIQV CVMSSSLCWG TPLTAHLVVV MGTQYYDGRE
1701: NSHSDYPVPD LLQMMGRASR PLLDNAGKCV IFCHAPRKEY YKKFLYEAFP VESQLQHFLH DNFNAEVVAG VIENKQDAVD YLTWTFMYRR LPQNPNYYNL
1801: QGVSHRHLSD HLSELVENTL SDLEASKCIE VEDEMELSPL NLGMIASYYY ISYTTIERFS SLLSSKTKMK GLLEILTSAS EYDMIPIRPG EEDTVRRLIN
1901: HQRFSFENPK CTDPHVKANA LLQAHFSRQN IGGNLAMDQR DVLLSATRLL QAMVDVISSN GWLNLALLAM EVSQMVTQGM WERDSMLLQL PHFTKDLAKR
2001: CQENPGKNIE TVFDLVEMED EERQELLKMS DAQLLDIARF CNRFPNIDLT YEIVGSEEVN PGKEVTLQVM LERDMEGRTE VGPVDSLRYP KTKEEGWWLV
2101: VGDTKTNQLL AIKRVSLQRK VKVKLDFTAP SEPGEKSYTL YFMCDSYLGC DQEYSFSVDV KGSGAGDRME E
Arabidopsis Description
BRR2ADExH-box ATP-dependent RNA helicase DExH12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYP1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.