Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G018080.31 | Barley | cytosol, nucleus, plastid | 81.71 | 22.95 |
| Bra035425.1-P | Field mustard | nucleus | 53.66 | 11.64 |
| CDY45149 | Canola | nucleus | 53.66 | 11.64 |
| PGSC0003DMT400053368 | Potato | nucleus | 95.12 | 7.86 |
| HORVU7Hr1G001080.1 | Barley | cytosol, nucleus, plastid | 98.78 | 7.78 |
| Solyc01g103080.2.1 | Tomato | nucleus | 93.9 | 7.77 |
| KRH46878 | Soybean | nucleus | 92.68 | 7.75 |
| VIT_06s0009g01750.t01 | Wine grape | cytosol | 92.68 | 7.62 |
| AT1G59760.1 | Thale cress | cytosol, nucleus, plastid | 81.71 | 6.78 |
| CDY65064 | Canola | nucleus | 73.17 | 6.05 |
| CDY30903 | Canola | nucleus | 71.95 | 5.98 |
| HORVU2Hr1G028060.7 | Barley | cytosol | 58.54 | 4.77 |
| HORVU4Hr1G018990.9 | Barley | plastid | 57.32 | 4.53 |
| Bra027835.1-P | Field mustard | nucleus | 51.22 | 4.39 |
| Bra035426.1-P | Field mustard | cytosol, golgi, plastid | 19.51 | 2.58 |
| CDY45148 | Canola | endoplasmic reticulum | 19.51 | 2.57 |
| HORVU6Hr1G025670.1 | Barley | nucleus | 36.59 | 2.19 |
| HORVU6Hr1G076860.2 | Barley | plastid | 26.83 | 1.84 |
| HORVU1Hr1G065680.1 | Barley | nucleus | 21.95 | 1.06 |
| HORVU4Hr1G049830.57 | Barley | nucleus | 13.41 | 0.98 |
| HORVU0Hr1G026710.1 | Barley | plastid | 21.95 | 0.93 |
| HORVU7Hr1G040480.2 | Barley | cytosol, mitochondrion | 17.07 | 0.65 |
| HORVU6Hr1G004350.3 | Barley | cytosol, mitochondrion, nucleus | 17.07 | 0.64 |
| HORVU4Hr1G068170.2 | Barley | cytosol, nucleus | 13.41 | 0.53 |
| CDY33604 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G048420.1 | EnsemblPlantsGene:HORVU1Hr1G048420 | Gene3D:3.40.50.300 | InterPro:P-loop_NTPase | PANTHER:PTHR12131 | PANTHER:PTHR12131:SF7 |
| SUPFAM:SSF52540 | UniParc:UPI000B484296 | UniProt:A0A287FG93 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr1H:+:358259064..358259666
Molecular Weight (calculated)
9473.7 Da
IEP (calculated)
5.657
GRAVY (calculated)
-0.160
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MVKMIIQRQY DPVILFSFSK RECEFLAMQM AKMDLNGDDE KVNIETIFWS AMDLLTDDDK KLPQVSNMLP LLKRGIGVHH SG
001: MGSVKRKSVE ESSDSAPPQK VQREDDSTQI INEELVGCVH DVSFPENYVP LAPSVHNKPP AKDFPFTLDS FQSEAIKCLD NGESVMVSAH TSAGKTVVAS
101: YAIAMSLKEN QRVIYTSPIK ALSNQKYRDF KEEFSDVGLM TGDVTIDPNA SCLVMTTEIL RSMQYKGSEI MREVAWIIFD EVHYMRDSER GVVWEESIVM
201: APKNSRFVFL SATVPNAKEF ADWVAKVHQQ PCHIVYTDYR PTPLQHYVFP AGGNGLYLVV DEKSKFHEDS FQKSLNALVP TNESDKKRDN GKFQKGLVIG
301: KLGEESDIFK LVKMIIQRQY DPVILFSFSK KECEALAMQM SKMVLNSDDE KDAVETIFAS AIDMLSDDDK KLPQVSNILP ILKRGIGVHH SGLLPILKEV
401: IEILFQEGLI KCLFATETFS IGLNMPAKTV VFTNVRKFDG DKFRWLSSGE YIQMSGRAGR RGIDKRGICI LMVDEKMEPA VAKSMLKGSA DSLNSAFHLS
501: YNMLLNQLRC EEGDPENLLR NSFFQFQADR AIPDLEKQIK SLEEERDSLV IEEEESLKNY YNLILQYKSL KKDIREIVFT PKYCLPFLLP NRAVCLDCTN
601: DDEEPQSFSI EDQDTWGVIM KFNKVKSLSE DDDSRRPEDA NYTVDVLTRC MVSKDGVGKK KVKAVPIKER GEPVVVTVPL SQIKSLSSAI MNIPKDLVPL
701: EARENALKKV SELLSRHPDG IPLDPEVDMK IKSSSYKKTV RRLEALENLF EKHKIAKSPL ITEKLKVLQM KEELIAKIKS LKKTVRSSTA LAFKDELKAR
801: KRVLRRLGYI TSDNVVELKG KVACEISSAE ELTLTELMFS GIFKDAKVEE LVSLLSCFVW RERLPDAAKP REELDLLFIQ LQDTARRVAE VQLDCKVEID
901: VESFVQSFRP DIMEAVYAWA KGSKFYEVME IARVFEGSLI RAIRRMEEVL QQLIVAAKSI GETQLEAKLE EAVSKIKRDI VFAASLYL
101: YAIAMSLKEN QRVIYTSPIK ALSNQKYRDF KEEFSDVGLM TGDVTIDPNA SCLVMTTEIL RSMQYKGSEI MREVAWIIFD EVHYMRDSER GVVWEESIVM
201: APKNSRFVFL SATVPNAKEF ADWVAKVHQQ PCHIVYTDYR PTPLQHYVFP AGGNGLYLVV DEKSKFHEDS FQKSLNALVP TNESDKKRDN GKFQKGLVIG
301: KLGEESDIFK LVKMIIQRQY DPVILFSFSK KECEALAMQM SKMVLNSDDE KDAVETIFAS AIDMLSDDDK KLPQVSNILP ILKRGIGVHH SGLLPILKEV
401: IEILFQEGLI KCLFATETFS IGLNMPAKTV VFTNVRKFDG DKFRWLSSGE YIQMSGRAGR RGIDKRGICI LMVDEKMEPA VAKSMLKGSA DSLNSAFHLS
501: YNMLLNQLRC EEGDPENLLR NSFFQFQADR AIPDLEKQIK SLEEERDSLV IEEEESLKNY YNLILQYKSL KKDIREIVFT PKYCLPFLLP NRAVCLDCTN
601: DDEEPQSFSI EDQDTWGVIM KFNKVKSLSE DDDSRRPEDA NYTVDVLTRC MVSKDGVGKK KVKAVPIKER GEPVVVTVPL SQIKSLSSAI MNIPKDLVPL
701: EARENALKKV SELLSRHPDG IPLDPEVDMK IKSSSYKKTV RRLEALENLF EKHKIAKSPL ITEKLKVLQM KEELIAKIKS LKKTVRSSTA LAFKDELKAR
801: KRVLRRLGYI TSDNVVELKG KVACEISSAE ELTLTELMFS GIFKDAKVEE LVSLLSCFVW RERLPDAAKP REELDLLFIQ LQDTARRVAE VQLDCKVEID
901: VESFVQSFRP DIMEAVYAWA KGSKFYEVME IARVFEGSLI RAIRRMEEVL QQLIVAAKSI GETQLEAKLE EAVSKIKRDI VFAASLYL
Arabidopsis Description
MTR4DExH-box ATP-dependent RNA helicase DExH9 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIF2]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.