Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G026710.1 | Barley | plastid | 99.94 | 87.81 |
| TraesCS1A01G323500.1 | Wheat | plastid | 95.28 | 78.24 |
| TraesCS1D01G324400.1 | Wheat | plastid | 95.22 | 78.19 |
| TraesCS1B01G336400.1 | Wheat | plastid | 95.93 | 78.05 |
| PGSC0003DMT400037575 | Potato | cytosol, extracellular | 7.32 | 77.5 |
| Os12t0291000-00 | Rice | nucleus | 79.93 | 66.02 |
| OQU79067 | Sorghum | plastid | 76.62 | 62.46 |
| Zm00001d023796_P033 | Maize | nucleus, plastid | 75.92 | 61.41 |
| CDY51661 | Canola | nucleus | 54.72 | 59.58 |
| Solyc08g068120.1.1 | Tomato | cytosol, nucleus, plastid | 46.99 | 54.86 |
| GSMUA_Achr11P... | Banana | nucleus | 60.8 | 50.42 |
| KRH16213 | Soybean | nucleus | 59.98 | 47.32 |
| CDY23339 | Canola | nucleus | 55.61 | 46.84 |
| VIT_04s0008g03960.t01 | Wine grape | nucleus | 59.33 | 46.57 |
| AT4G32700.2 | Thale cress | nucleus | 58.62 | 46.1 |
| Bra040938.1-P | Field mustard | nucleus | 57.85 | 46.07 |
| Bra011372.1-P | Field mustard | nucleus | 59.03 | 43.5 |
| CDY51662 | Canola | nucleus | 16.23 | 35.81 |
| Solyc08g068110.1.1 | Tomato | nucleus | 12.28 | 29.5 |
| HORVU1Hr1G048420.1 | Barley | cytosol | 1.06 | 21.95 |
| HORVU4Hr1G049830.57 | Barley | nucleus | 11.45 | 17.29 |
| HORVU1Hr1G018080.31 | Barley | cytosol, nucleus, plastid | 2.6 | 15.07 |
| HORVU7Hr1G001080.1 | Barley | cytosol, nucleus, plastid | 8.44 | 13.74 |
| HORVU2Hr1G028060.7 | Barley | cytosol | 8.09 | 13.62 |
| HORVU4Hr1G018990.9 | Barley | plastid | 8.09 | 13.21 |
| HORVU6Hr1G076860.2 | Barley | plastid | 8.68 | 12.29 |
| HORVU6Hr1G025670.1 | Barley | nucleus | 9.15 | 11.34 |
| HORVU6Hr1G004350.3 | Barley | cytosol, mitochondrion, nucleus | 14.23 | 11.0 |
| HORVU7Hr1G040480.2 | Barley | cytosol, mitochondrion | 13.87 | 10.93 |
| HORVU4Hr1G068170.2 | Barley | cytosol, nucleus | 12.69 | 10.29 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | Gene3D:1.10.150.20 | Gene3D:1.10.3380.20 | Gene3D:1.20.1060.10 | MapMan:14.2.2 |
| Gene3D:3.30.70.370 | Gene3D:3.40.50.300 | UniProt:A0A287G050 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DNA-dir_DNA_pol_A_palm_dom | InterPro:DNA_polymerase_A |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0003887 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006260 | GO:GO:0006261 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0071897 |
| EnsemblPlantsGene:HORVU1Hr1G065680 | EnsemblPlants:HORVU1Hr1G065680.1 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF00476 | PRINTS:PR00868 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR10133 | PANTHER:PTHR10133:SF27 | SMART:SM00482 | SMART:SM00487 | SMART:SM00490 |
| SUPFAM:SSF158702 | SUPFAM:SSF52540 | SUPFAM:SSF56672 | UniParc:UPI000B4801E9 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:+:468668111..468681310
Molecular Weight (calculated)
186699.0 Da
IEP (calculated)
8.109
GRAVY (calculated)
-0.217
Length
1694 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEFADGVSAM AHKGPRRRHC DAAADKSSCA VALGSKTLPR SGNEEFNCEN TVGSNPMKQI DTFPNTSELA VTNRQHKNNS PLPVKHLDFF HEDAIQVSGL
0101: EGKEKGGTVP GSAQVNQGRP KDSSFYRTEN LMRSVDDTKT ITFNPDVGST VMIPGEGLFE SKTAGMGHSI DVGVRGSCMI KSDLNQLTHG KAKLPAANSN
0201: SCKPNRDSKS KFASQRVEAC TPTSSVPLKD HSKLSSWLPQ ELCAIYMKKG IPQLYPWQVE CLLVDGVLEN RNLVYCASTS AGKSFVAEVL MLRRILSSQK
0301: IAILVLPYVS LCAEKAEHLE QLLAPLGKHV RSYYGNQGGG SLPKDTSVAV CTIEKANSLV NKLLEDGRLS ELGIIVIDEL HMVGDQHRGY LLELMLTKLR
0401: YAAGEGNSES SSGETSGSSS GKAGATHGLQ IIGMSATMPN VAAVADWLQA ALYQTTFRPV PLEEFIKVGN QIFDKDMNIV RVLPKIADIG GKDPDHIVEL
0501: CNEVVLEGHS VLLFCSSRKG CESTAKHIAK FLKVANVGSK EVSSEFRDVA SAVEALKRCP AGLDPVLEET LPFGVAYHHA GLTVEERDIV ETCYRKGLVR
0601: VLTATSTLAA GVNLPARRVI FRQPRIGRDF IDGTRYRQMA GRAGRTGIDT KGESILVCRP EEVKRITGIV RSDCPPLQSC LSEDKNGMTH AIMEVVAGGI
0701: VQTASDIHRY VRCTLLNSTK SFDDVVKSAQ DSLRWLCHKR FVEWNNDTKI YSTTPLGRAS FGSSLNPEES LVVLDDLSRA REGFVLASDL HLVYLVTPIN
0801: VEVEPDWELY YERFMQLSSL EQSVGNRVGV TEPFLMHMAH GAAMPIRGRP KRNTSGGSGV NTLINDQSLR VSKRFYVALM ISRLAQEIPV TDVCESFKVA
0901: RGTIQALQEN AGRFASMVSA FCQRLGWQDL EGLVAKFQNR VSFGVRAEIA ELTTIPFVKG SRARALYNSG LRTPVTIAEA SIPEIAKALF ENSWSGQDDS
1001: GLRRMQFVIA KKIKNGARRI VLEEAEAARV AAFSAFKSLG VEVPQFTTPL LPASEDSPPR EAMVFPSAGH AKCQESVLGA RDGDERNICS DYVAQRASTE
1101: IVGEDMHPVS TIHIKESQGI ANSVNLASMQ EASPLSTLPS RNVADRGPVN AHNFPGGFDG FLDQWSSVNE FSFDLHFVKK SSKLSLTIFE ILGVAVCWES
1201: SPVYYCNFPK DLTPTGNNNS VELWEGFRRR WSRIVGIMQQ KSVKKMTWNL KIQIQALKSP CVSCQRLSRL HLDPKTLNNI EVLDSTYVLL PPISVYNGLD
1301: ICLVAWILWP DEESKTVPNL EKLVKRRLPS EAAAAANRDG RWRNQMHKAA HNGCCRRAAQ TRALGSVLMK LLVSQNLSDL IETVEGPLVN VLADMELWGV
1401: GADMDACLRA RHIIITRLKE LDKEAYKLVG KSFSLNANAD IADILFTHLK LPVPKGCEKG KLHPSTDKQC LDHLRDLHPI VSVIKEHRTL AKLLNGTLGS
1501: ICSRAKLCIQ SQRYIIHGNW LQTSTATGRL SMEEPNLQTV EHMVNFTTGK NDKDFTSMSM VDRHEINARE FFVPTQDNWL LVTADYSQIE LRFMAHFSKD
1601: PVLIELLSKP DVDVFTMIAS RWSGKEESLV SSKDRDNTKR FIYGILYGMG SNSLAEQLEC SPAEAAQKIQ SFKRFFPGVS SWLQQAVASC RQKG
0101: EGKEKGGTVP GSAQVNQGRP KDSSFYRTEN LMRSVDDTKT ITFNPDVGST VMIPGEGLFE SKTAGMGHSI DVGVRGSCMI KSDLNQLTHG KAKLPAANSN
0201: SCKPNRDSKS KFASQRVEAC TPTSSVPLKD HSKLSSWLPQ ELCAIYMKKG IPQLYPWQVE CLLVDGVLEN RNLVYCASTS AGKSFVAEVL MLRRILSSQK
0301: IAILVLPYVS LCAEKAEHLE QLLAPLGKHV RSYYGNQGGG SLPKDTSVAV CTIEKANSLV NKLLEDGRLS ELGIIVIDEL HMVGDQHRGY LLELMLTKLR
0401: YAAGEGNSES SSGETSGSSS GKAGATHGLQ IIGMSATMPN VAAVADWLQA ALYQTTFRPV PLEEFIKVGN QIFDKDMNIV RVLPKIADIG GKDPDHIVEL
0501: CNEVVLEGHS VLLFCSSRKG CESTAKHIAK FLKVANVGSK EVSSEFRDVA SAVEALKRCP AGLDPVLEET LPFGVAYHHA GLTVEERDIV ETCYRKGLVR
0601: VLTATSTLAA GVNLPARRVI FRQPRIGRDF IDGTRYRQMA GRAGRTGIDT KGESILVCRP EEVKRITGIV RSDCPPLQSC LSEDKNGMTH AIMEVVAGGI
0701: VQTASDIHRY VRCTLLNSTK SFDDVVKSAQ DSLRWLCHKR FVEWNNDTKI YSTTPLGRAS FGSSLNPEES LVVLDDLSRA REGFVLASDL HLVYLVTPIN
0801: VEVEPDWELY YERFMQLSSL EQSVGNRVGV TEPFLMHMAH GAAMPIRGRP KRNTSGGSGV NTLINDQSLR VSKRFYVALM ISRLAQEIPV TDVCESFKVA
0901: RGTIQALQEN AGRFASMVSA FCQRLGWQDL EGLVAKFQNR VSFGVRAEIA ELTTIPFVKG SRARALYNSG LRTPVTIAEA SIPEIAKALF ENSWSGQDDS
1001: GLRRMQFVIA KKIKNGARRI VLEEAEAARV AAFSAFKSLG VEVPQFTTPL LPASEDSPPR EAMVFPSAGH AKCQESVLGA RDGDERNICS DYVAQRASTE
1101: IVGEDMHPVS TIHIKESQGI ANSVNLASMQ EASPLSTLPS RNVADRGPVN AHNFPGGFDG FLDQWSSVNE FSFDLHFVKK SSKLSLTIFE ILGVAVCWES
1201: SPVYYCNFPK DLTPTGNNNS VELWEGFRRR WSRIVGIMQQ KSVKKMTWNL KIQIQALKSP CVSCQRLSRL HLDPKTLNNI EVLDSTYVLL PPISVYNGLD
1301: ICLVAWILWP DEESKTVPNL EKLVKRRLPS EAAAAANRDG RWRNQMHKAA HNGCCRRAAQ TRALGSVLMK LLVSQNLSDL IETVEGPLVN VLADMELWGV
1401: GADMDACLRA RHIIITRLKE LDKEAYKLVG KSFSLNANAD IADILFTHLK LPVPKGCEKG KLHPSTDKQC LDHLRDLHPI VSVIKEHRTL AKLLNGTLGS
1501: ICSRAKLCIQ SQRYIIHGNW LQTSTATGRL SMEEPNLQTV EHMVNFTTGK NDKDFTSMSM VDRHEINARE FFVPTQDNWL LVTADYSQIE LRFMAHFSKD
1601: PVLIELLSKP DVDVFTMIAS RWSGKEESLV SSKDRDNTKR FIYGILYGMG SNSLAEQLEC SPAEAAQKIQ SFKRFFPGVS SWLQQAVASC RQKG
0001: MDSDSSKSRI DQFYVSKKRK HQSPNLKSGR NEKNVKVTGE RSPGDKGTLD SYLKASLDDK STTNSGLQAR QEAFTRKLDL EVSASSVGQN IHPCLPKPVS
0101: FATFKECLGQ NGSQDLHKEG VAAETHATDG LLCANQKDNS ELRDFATSFL SLYCSGVQSV VGSPPHQKEN ELKRRSSSSS LAQDIQISHK RRCESENIPS
0201: LDDLTNPLGS KPESLARNGN NRDKPVSDPT KKMPSNESVE IPMGLRKCSK APESSAHLTE FHTPGSAIKS CPVGTPKSGC GSSMFSPGEA FWNEAIQVAD
0301: GLTIPIENFG SVEAKVRDQH VTILSCSKKT DKCTEKLERS LDLDEIRVKD KDAIGFSKVV EKHGRDFNKE VYQLPVKNLE LLFQDKNING GIQERCASFD
0401: QNNITLGSSR ISESAFVGNK GCENLDIANN AQADKGLIGK MYPEPEGKKV LLCEENRGVR SVSMISNMRK PVGSSESEES HTPSSSHRNY DGLSLSTWLP
0501: SEVCSVYNKK GISKLYPWQV ECLQVDGVLQ KRNLVYCAST SAGKSFVAEV LMLRRVIRTG KMALLVLPYV SICAEKAEHL EVLLEPLGKH VRSYYGNQGG
0601: GTLPKDTSVA VCTIEKANSL INRLLEEGRL SELGIIVIDE LHMVGDQHRG YLLELMLTKL RYAAGEGSSE SSSGESSGTS SGKADPAHGL QIVGMSATMP
0701: NVGAVADWLQ AALYQTEFRP VPLEEYIKVG STIYNKKMEV VRTIPKAADM GGKDPDHIVE LCNEVVQEGN SVLIFCSSRK GCESTARHIS KLIKNVPVNV
0801: DGENSEFMDI RSAIDALRRS PSGVDPVLEE TLPSGVAYHH AGLTVEEREI VETCYRKGLV RVLTATSTLA AGVNLPARRV IFRQPMIGRD FIDGTRYKQM
0901: SGRAGRTGID TKGDSVLICK PGELKRIMAL LNETCPPLQS CLSEDKNGMT HAILEVVAGG IVQTAKDIHR YVRCTLLNST KPFQDVVKSA QDSLRWLCHR
1001: KFLEWNEETK LYTTTPLGRG SFGSSLCPEE SLIVLDDLLR AREGLVMASD LHLVYLVTPI NVGVEPNWEL YYERFMELSP LEQSVGNRVG VVEPFLMRMA
1101: HGATVRTLNR PQDVKKNLRG EYDSRHGSTS MKMLSDEQML RVCKRFFVAL ILSKLVQEAS VTEVCEAFKV ARGMVQALQE NAGRFSSMVS VFCERLGWHD
1201: LEGLVAKFQN RVSFGVRAEI VELTSIPYIK GSRARALYKA GLRTSQAIAE ASIPEIVKAL FESSAWAAEG TGQRRIHLGL AKKIKNGARK IVLEKAEEAR
1301: AAAFSAFKSL GLDVNELSKP LPLAPASSLN GQETTERDIS RGSVGPDGLQ QSIEGHMECE NFDMDNHREK PSEVLGDATL GVSSEINLTS RLPNFRPIGT
1401: AVGTNGPSAV SILSSDTFPI PVYDNREIKP KDNVEQHLTR NDHIPLSSNK DGTGEKGPVT AGNISGGFDS FLELWGSAGE FFFDLHYNKL QDLNSRISYE
1501: IHGIAICWNC SPVYYVNLNK DLPNLECVEK QKLIEDAVIG KSEVLASHNM LDVIKSRWNK ISKIMGNVNT RKFTWNLKVQ IQVLKSPAIS IQRCTRLNLP
1601: EGIRDELVDG SWLMMPPLHT SHTIDMSIVI WILWPDEERH SNPNIDKEVK KRLSPEAAEA ANRSGRWRNQ IRRVAHNGCC RRVAQTRALC SALWKILVSE
1701: ELLQALTTIE MPLVNVLADM ELWGIGIDIE GCLRARNILR DKLRSLEKKA FELAGMTFSL HNPADIANVL FGQLKLPIPE NQSKGKLHPS TDKHCLDLLR
1801: NEHPVVPIIK EHRTLAKLLN CTLGSICSLA KLRLSTQRYT LHGRWLQTST ATGRLSIEEP NLQSVEHEVE FKLDKNGRDV SSDADRYKIN ARDFFVPTQE
1901: NWLLLTADYS QIELRLMAHF SRDSSLISKL SQPEGDVFTM IAAKWTGKAE DSVSPHDRDQ TKRLIYGILY GMGANRLAEQ LECTSDEAKE KIRSFKSSFP
2001: AVTSWLNETI SFCQEKGYIQ TLKGRRRFLS KIKFGNAKEK SKAQRQAVNS MCQGSAADII KIAMINIYSA IAEDVDTAAS SSSSETRFHM LKGRCRILLQ
2101: VHDELVLEVD PSYVKLAAML LQTSMENAVS LLVPLHVKLK VGKTWGSLEP FQTD
0101: FATFKECLGQ NGSQDLHKEG VAAETHATDG LLCANQKDNS ELRDFATSFL SLYCSGVQSV VGSPPHQKEN ELKRRSSSSS LAQDIQISHK RRCESENIPS
0201: LDDLTNPLGS KPESLARNGN NRDKPVSDPT KKMPSNESVE IPMGLRKCSK APESSAHLTE FHTPGSAIKS CPVGTPKSGC GSSMFSPGEA FWNEAIQVAD
0301: GLTIPIENFG SVEAKVRDQH VTILSCSKKT DKCTEKLERS LDLDEIRVKD KDAIGFSKVV EKHGRDFNKE VYQLPVKNLE LLFQDKNING GIQERCASFD
0401: QNNITLGSSR ISESAFVGNK GCENLDIANN AQADKGLIGK MYPEPEGKKV LLCEENRGVR SVSMISNMRK PVGSSESEES HTPSSSHRNY DGLSLSTWLP
0501: SEVCSVYNKK GISKLYPWQV ECLQVDGVLQ KRNLVYCAST SAGKSFVAEV LMLRRVIRTG KMALLVLPYV SICAEKAEHL EVLLEPLGKH VRSYYGNQGG
0601: GTLPKDTSVA VCTIEKANSL INRLLEEGRL SELGIIVIDE LHMVGDQHRG YLLELMLTKL RYAAGEGSSE SSSGESSGTS SGKADPAHGL QIVGMSATMP
0701: NVGAVADWLQ AALYQTEFRP VPLEEYIKVG STIYNKKMEV VRTIPKAADM GGKDPDHIVE LCNEVVQEGN SVLIFCSSRK GCESTARHIS KLIKNVPVNV
0801: DGENSEFMDI RSAIDALRRS PSGVDPVLEE TLPSGVAYHH AGLTVEEREI VETCYRKGLV RVLTATSTLA AGVNLPARRV IFRQPMIGRD FIDGTRYKQM
0901: SGRAGRTGID TKGDSVLICK PGELKRIMAL LNETCPPLQS CLSEDKNGMT HAILEVVAGG IVQTAKDIHR YVRCTLLNST KPFQDVVKSA QDSLRWLCHR
1001: KFLEWNEETK LYTTTPLGRG SFGSSLCPEE SLIVLDDLLR AREGLVMASD LHLVYLVTPI NVGVEPNWEL YYERFMELSP LEQSVGNRVG VVEPFLMRMA
1101: HGATVRTLNR PQDVKKNLRG EYDSRHGSTS MKMLSDEQML RVCKRFFVAL ILSKLVQEAS VTEVCEAFKV ARGMVQALQE NAGRFSSMVS VFCERLGWHD
1201: LEGLVAKFQN RVSFGVRAEI VELTSIPYIK GSRARALYKA GLRTSQAIAE ASIPEIVKAL FESSAWAAEG TGQRRIHLGL AKKIKNGARK IVLEKAEEAR
1301: AAAFSAFKSL GLDVNELSKP LPLAPASSLN GQETTERDIS RGSVGPDGLQ QSIEGHMECE NFDMDNHREK PSEVLGDATL GVSSEINLTS RLPNFRPIGT
1401: AVGTNGPSAV SILSSDTFPI PVYDNREIKP KDNVEQHLTR NDHIPLSSNK DGTGEKGPVT AGNISGGFDS FLELWGSAGE FFFDLHYNKL QDLNSRISYE
1501: IHGIAICWNC SPVYYVNLNK DLPNLECVEK QKLIEDAVIG KSEVLASHNM LDVIKSRWNK ISKIMGNVNT RKFTWNLKVQ IQVLKSPAIS IQRCTRLNLP
1601: EGIRDELVDG SWLMMPPLHT SHTIDMSIVI WILWPDEERH SNPNIDKEVK KRLSPEAAEA ANRSGRWRNQ IRRVAHNGCC RRVAQTRALC SALWKILVSE
1701: ELLQALTTIE MPLVNVLADM ELWGIGIDIE GCLRARNILR DKLRSLEKKA FELAGMTFSL HNPADIANVL FGQLKLPIPE NQSKGKLHPS TDKHCLDLLR
1801: NEHPVVPIIK EHRTLAKLLN CTLGSICSLA KLRLSTQRYT LHGRWLQTST ATGRLSIEEP NLQSVEHEVE FKLDKNGRDV SSDADRYKIN ARDFFVPTQE
1901: NWLLLTADYS QIELRLMAHF SRDSSLISKL SQPEGDVFTM IAAKWTGKAE DSVSPHDRDQ TKRLIYGILY GMGANRLAEQ LECTSDEAKE KIRSFKSSFP
2001: AVTSWLNETI SFCQEKGYIQ TLKGRRRFLS KIKFGNAKEK SKAQRQAVNS MCQGSAADII KIAMINIYSA IAEDVDTAAS SSSSETRFHM LKGRCRILLQ
2101: VHDELVLEVD PSYVKLAAML LQTSMENAVS LLVPLHVKLK VGKTWGSLEP FQTD
Arabidopsis Description
TEBHelicase and polymerase-containing protein TEBICHI [Source:UniProtKB/Swiss-Prot;Acc:Q588V7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.