Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037575 | Potato | cytosol, extracellular | 5.82 | 78.12 |
| CDY51661 | Canola | nucleus | 51.33 | 70.82 |
| Solyc08g068120.1.1 | Tomato | cytosol, nucleus, plastid | 45.65 | 67.54 |
| VIT_04s0008g03960.t01 | Wine grape | nucleus | 64.32 | 63.99 |
| CDY23339 | Canola | nucleus | 56.64 | 60.47 |
| HORVU1Hr1G065680.1 | Barley | nucleus | 47.32 | 59.98 |
| AT4G32700.2 | Thale cress | nucleus | 59.94 | 59.75 |
| Bra040938.1-P | Field mustard | nucleus | 58.87 | 59.43 |
| GSMUA_Achr11P... | Banana | nucleus | 55.19 | 58.0 |
| Os12t0291000-00 | Rice | nucleus | 54.45 | 57.0 |
| TraesCS1A01G323500.1 | Wheat | plastid | 54.31 | 56.52 |
| TraesCS1D01G324400.1 | Wheat | plastid | 54.17 | 56.37 |
| TraesCS1B01G336400.1 | Wheat | plastid | 54.45 | 56.15 |
| HORVU0Hr1G026710.1 | Barley | plastid | 50.21 | 55.91 |
| Bra011372.1-P | Field mustard | nucleus | 59.43 | 55.5 |
| OQU79067 | Sorghum | plastid | 52.31 | 54.04 |
| Zm00001d023796_P033 | Maize | nucleus, plastid | 52.49 | 53.82 |
| CDY51662 | Canola | nucleus | 17.33 | 48.44 |
| Solyc08g068110.1.1 | Tomato | nucleus | 15.09 | 45.96 |
| KRH07179 | Soybean | endoplasmic reticulum, plastid | 10.11 | 18.24 |
| KRH46878 | Soybean | nucleus | 7.31 | 16.0 |
| KRH60115 | Soybean | cytosol | 7.08 | 15.72 |
| KRH41401 | Soybean | nucleus | 7.13 | 15.68 |
| KRG98348 | Soybean | cytosol | 9.08 | 14.53 |
| KRH43818 | Soybean | nucleus | 14.44 | 14.2 |
| KRH13647 | Soybean | cytosol | 14.44 | 14.2 |
| KRH74713 | Soybean | nucleus | 7.69 | 14.2 |
| KRH54676 | Soybean | nucleus | 11.5 | 11.83 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr14:+:27608534..27637060
Molecular Weight (calculated)
236006.0 Da
IEP (calculated)
7.429
GRAVY (calculated)
-0.269
Length
2147 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASPSHRSRI DQFYASKKRK AASPVPKAGR FEKGARHGAD ESPSAKGTLE GYLVSSQDGG GDGCGDANTV KVKRNLTSEI GGSLDNELNK HTVSLGQGCG
0101: DSQSIQPSEI GQGVAKSERK QFAADFLSLY CSVLHPSVGL PLEMKMDDHK RHGSPTLVEG NSVLLRKNND TAGELCFGGE NTLLSVKIDE DIKSGVVGNN
0201: NSMGCVPGSC TKVSGGGDTT GFETGFRKCN NTPKPSMKLA EYYNTPGSLI VKASVRETPK STRGSSSFSP GEAFWNEAIQ LADGLCVPMG NDPSKVMGES
0301: NVVEEEPEMK NSCNLQNYDG KPRKILDQSK NRIRNREMGA PLGLVGMHTK DSVKEASSLP VKHFDFSFED NNLEENTLQD CRVGDSINVT CVAGKQYDSC
0401: SMIGHTYEKM NEVQENTLVD TLGKRVCQDN VSMTSNSPHN EVRTPISAHA SDEASTPSTS VSLNDHFDLN SWLPPEICSI YRKKGISRLY SWQVDCLRVD
0501: GVLQRRNLVY CASTSAGKSF VAEILMLRRV IITGKMALLV LPYVSICAEK AEHLERLLDP LGKHVRSYYG NQGGGTLPKD TSVAVCTIEK ANSLVNRLLE
0601: EGRLSEMGII VIDELHMVGD PRRGYLLELM LTKLRYAAGE GIPKSSDGES SGGSSDKADP AQGLQIVGMS ATMPNVAAVA DWLQAALYQT EFRPVPLEEY
0701: IKVGNSIYNK SMELCRIISK AAELGGKDPD HVVELCNEVV QEGHSVLIFC SSRKGCESTA RHIAKFLKSF TVDANDCEFA DITSAINSLG KCPAGLDPIL
0801: QETLPSGVAF HHAGLTVEER EIVETCYRKG LLRVLTATST LAAGVNLPAR RVIFRQPRIG CDFLDGTRYK QMAGRAGRTG IDTKGESILI CKPEELKKVS
0901: GLLNESCPPL HSCLSEDMNG MTHAILEVVA GGIVQTASDI NRYVRCTLLN STKPFLDVVK SAQESLRWLC QRKFLEWNED TKLYSTTPLG RASFGSSLCP
1001: QESLIVLADL SRAREGFVLA SDLHLVYLVT PINVDVEPDW ELYYEHFVKL SLLDQSVGNR VGVTEPFLMY MAHGAPLRAS NKSRDNTRSL HNQRRNQLGI
1101: SSATANYDDQ TLRVCRRFYV ALILSLLVQE IPVGEVCEAF KVARGMVQAL QENAGRFASM VAVFCERLGW HDLEGLVAKF QNRVSFGVRA EIVELTTIPY
1201: VKGSRARSLY KAGLRTPHAI AEASIPEIVK ALFESSSWAT EGSAQRGFQF GIAKKIKNGA RKIVFDKAEE ASNAAFSAFK SLGFNVPQFD PQILSTAARD
1301: SIRLGTGSTS GSDTTDTSHS FVNADCIDNT NKFTLDKEKE DLIKLSVNGT VASVEGKSRS RMICSLSSVP VAGPKMDELN RTSDHTKNAD MTILSVQLQK
1401: PNDKSGVHDG CDAHCTEEAH KNGNLASGNA GSSSQKGPIN AVSSPGGLDS FLDLWDSMPE FYFDIHYIKR LELHSTAPFE IHGIAVCWEN SSVYYINLPR
1501: DILLSDSIKD GCLSLSACSH KKKVSSSNSK QDLEIARSRW NRISKIIGKI NVRKFTWNLK IQMQVLKRPA FSVQRFGCLD TLGKSMDLEV VDNSYVLLPP
1601: IHVKDAIDMC IVAWILWPDE ESSSSPNLDK EVKKRLSSED AAVANQSGRW RNQMRRAAHN GCCRRVAQIR ALSSVLWKLL VSEKLVEVLM DIEIPLVNVV
1701: ADMELWGIGV DLERCIQARK LLIKRLKHLE KEAYKLAGTT FSLNMPADIA RVLYEHLKLP IPDVRNKGKQ HPSTSKHCLD ALRHEHPIVP VIKEHRTMAK
1801: LLNSTLGSIC SLARLSVSTQ KYTLHGHWLQ TSTATGRLSM EEPNLQCVEH AVEFKMKDEN EGDADESYCT INARDFFVPT QDNWLLLTAD YSQIELRLMA
1901: HFSKDSSLVE LLSKPDGDVF TMIAARWTGC PEVSVCSKER EQTKRMVYGI LYGMGVNSLA EQLDCTSDEA AEKIANFKSS FPGVSSWLLE AVASCRSKGY
2001: VETLKGRKRF LSKIKYGSST EKSKAQRQAV NSICQGSAAD IIKIAMLRIY SAIVTGFDSP DSSSSLATKF HMLKDRCRIL LQVHDELMLE VDPSVIKEAA
2101: LLLQTSMENA VSLLVPLHVK LKVGRTWGSL EPYTSDKFNN ATLVAES
0101: DSQSIQPSEI GQGVAKSERK QFAADFLSLY CSVLHPSVGL PLEMKMDDHK RHGSPTLVEG NSVLLRKNND TAGELCFGGE NTLLSVKIDE DIKSGVVGNN
0201: NSMGCVPGSC TKVSGGGDTT GFETGFRKCN NTPKPSMKLA EYYNTPGSLI VKASVRETPK STRGSSSFSP GEAFWNEAIQ LADGLCVPMG NDPSKVMGES
0301: NVVEEEPEMK NSCNLQNYDG KPRKILDQSK NRIRNREMGA PLGLVGMHTK DSVKEASSLP VKHFDFSFED NNLEENTLQD CRVGDSINVT CVAGKQYDSC
0401: SMIGHTYEKM NEVQENTLVD TLGKRVCQDN VSMTSNSPHN EVRTPISAHA SDEASTPSTS VSLNDHFDLN SWLPPEICSI YRKKGISRLY SWQVDCLRVD
0501: GVLQRRNLVY CASTSAGKSF VAEILMLRRV IITGKMALLV LPYVSICAEK AEHLERLLDP LGKHVRSYYG NQGGGTLPKD TSVAVCTIEK ANSLVNRLLE
0601: EGRLSEMGII VIDELHMVGD PRRGYLLELM LTKLRYAAGE GIPKSSDGES SGGSSDKADP AQGLQIVGMS ATMPNVAAVA DWLQAALYQT EFRPVPLEEY
0701: IKVGNSIYNK SMELCRIISK AAELGGKDPD HVVELCNEVV QEGHSVLIFC SSRKGCESTA RHIAKFLKSF TVDANDCEFA DITSAINSLG KCPAGLDPIL
0801: QETLPSGVAF HHAGLTVEER EIVETCYRKG LLRVLTATST LAAGVNLPAR RVIFRQPRIG CDFLDGTRYK QMAGRAGRTG IDTKGESILI CKPEELKKVS
0901: GLLNESCPPL HSCLSEDMNG MTHAILEVVA GGIVQTASDI NRYVRCTLLN STKPFLDVVK SAQESLRWLC QRKFLEWNED TKLYSTTPLG RASFGSSLCP
1001: QESLIVLADL SRAREGFVLA SDLHLVYLVT PINVDVEPDW ELYYEHFVKL SLLDQSVGNR VGVTEPFLMY MAHGAPLRAS NKSRDNTRSL HNQRRNQLGI
1101: SSATANYDDQ TLRVCRRFYV ALILSLLVQE IPVGEVCEAF KVARGMVQAL QENAGRFASM VAVFCERLGW HDLEGLVAKF QNRVSFGVRA EIVELTTIPY
1201: VKGSRARSLY KAGLRTPHAI AEASIPEIVK ALFESSSWAT EGSAQRGFQF GIAKKIKNGA RKIVFDKAEE ASNAAFSAFK SLGFNVPQFD PQILSTAARD
1301: SIRLGTGSTS GSDTTDTSHS FVNADCIDNT NKFTLDKEKE DLIKLSVNGT VASVEGKSRS RMICSLSSVP VAGPKMDELN RTSDHTKNAD MTILSVQLQK
1401: PNDKSGVHDG CDAHCTEEAH KNGNLASGNA GSSSQKGPIN AVSSPGGLDS FLDLWDSMPE FYFDIHYIKR LELHSTAPFE IHGIAVCWEN SSVYYINLPR
1501: DILLSDSIKD GCLSLSACSH KKKVSSSNSK QDLEIARSRW NRISKIIGKI NVRKFTWNLK IQMQVLKRPA FSVQRFGCLD TLGKSMDLEV VDNSYVLLPP
1601: IHVKDAIDMC IVAWILWPDE ESSSSPNLDK EVKKRLSSED AAVANQSGRW RNQMRRAAHN GCCRRVAQIR ALSSVLWKLL VSEKLVEVLM DIEIPLVNVV
1701: ADMELWGIGV DLERCIQARK LLIKRLKHLE KEAYKLAGTT FSLNMPADIA RVLYEHLKLP IPDVRNKGKQ HPSTSKHCLD ALRHEHPIVP VIKEHRTMAK
1801: LLNSTLGSIC SLARLSVSTQ KYTLHGHWLQ TSTATGRLSM EEPNLQCVEH AVEFKMKDEN EGDADESYCT INARDFFVPT QDNWLLLTAD YSQIELRLMA
1901: HFSKDSSLVE LLSKPDGDVF TMIAARWTGC PEVSVCSKER EQTKRMVYGI LYGMGVNSLA EQLDCTSDEA AEKIANFKSS FPGVSSWLLE AVASCRSKGY
2001: VETLKGRKRF LSKIKYGSST EKSKAQRQAV NSICQGSAAD IIKIAMLRIY SAIVTGFDSP DSSSSLATKF HMLKDRCRIL LQVHDELMLE VDPSVIKEAA
2101: LLLQTSMENA VSLLVPLHVK LKVGRTWGSL EPYTSDKFNN ATLVAES
0001: MDSDSSKSRI DQFYVSKKRK HQSPNLKSGR NEKNVKVTGE RSPGDKGTLD SYLKASLDDK STTNSGLQAR QEAFTRKLDL EVSASSVGQN IHPCLPKPVS
0101: FATFKECLGQ NGSQDLHKEG VAAETHATDG LLCANQKDNS ELRDFATSFL SLYCSGVQSV VGSPPHQKEN ELKRRSSSSS LAQDIQISHK RRCESENIPS
0201: LDDLTNPLGS KPESLARNGN NRDKPVSDPT KKMPSNESVE IPMGLRKCSK APESSAHLTE FHTPGSAIKS CPVGTPKSGC GSSMFSPGEA FWNEAIQVAD
0301: GLTIPIENFG SVEAKVRDQH VTILSCSKKT DKCTEKLERS LDLDEIRVKD KDAIGFSKVV EKHGRDFNKE VYQLPVKNLE LLFQDKNING GIQERCASFD
0401: QNNITLGSSR ISESAFVGNK GCENLDIANN AQADKGLIGK MYPEPEGKKV LLCEENRGVR SVSMISNMRK PVGSSESEES HTPSSSHRNY DGLSLSTWLP
0501: SEVCSVYNKK GISKLYPWQV ECLQVDGVLQ KRNLVYCAST SAGKSFVAEV LMLRRVIRTG KMALLVLPYV SICAEKAEHL EVLLEPLGKH VRSYYGNQGG
0601: GTLPKDTSVA VCTIEKANSL INRLLEEGRL SELGIIVIDE LHMVGDQHRG YLLELMLTKL RYAAGEGSSE SSSGESSGTS SGKADPAHGL QIVGMSATMP
0701: NVGAVADWLQ AALYQTEFRP VPLEEYIKVG STIYNKKMEV VRTIPKAADM GGKDPDHIVE LCNEVVQEGN SVLIFCSSRK GCESTARHIS KLIKNVPVNV
0801: DGENSEFMDI RSAIDALRRS PSGVDPVLEE TLPSGVAYHH AGLTVEEREI VETCYRKGLV RVLTATSTLA AGVNLPARRV IFRQPMIGRD FIDGTRYKQM
0901: SGRAGRTGID TKGDSVLICK PGELKRIMAL LNETCPPLQS CLSEDKNGMT HAILEVVAGG IVQTAKDIHR YVRCTLLNST KPFQDVVKSA QDSLRWLCHR
1001: KFLEWNEETK LYTTTPLGRG SFGSSLCPEE SLIVLDDLLR AREGLVMASD LHLVYLVTPI NVGVEPNWEL YYERFMELSP LEQSVGNRVG VVEPFLMRMA
1101: HGATVRTLNR PQDVKKNLRG EYDSRHGSTS MKMLSDEQML RVCKRFFVAL ILSKLVQEAS VTEVCEAFKV ARGMVQALQE NAGRFSSMVS VFCERLGWHD
1201: LEGLVAKFQN RVSFGVRAEI VELTSIPYIK GSRARALYKA GLRTSQAIAE ASIPEIVKAL FESSAWAAEG TGQRRIHLGL AKKIKNGARK IVLEKAEEAR
1301: AAAFSAFKSL GLDVNELSKP LPLAPASSLN GQETTERDIS RGSVGPDGLQ QSIEGHMECE NFDMDNHREK PSEVLGDATL GVSSEINLTS RLPNFRPIGT
1401: AVGTNGPSAV SILSSDTFPI PVYDNREIKP KDNVEQHLTR NDHIPLSSNK DGTGEKGPVT AGNISGGFDS FLELWGSAGE FFFDLHYNKL QDLNSRISYE
1501: IHGIAICWNC SPVYYVNLNK DLPNLECVEK QKLIEDAVIG KSEVLASHNM LDVIKSRWNK ISKIMGNVNT RKFTWNLKVQ IQVLKSPAIS IQRCTRLNLP
1601: EGIRDELVDG SWLMMPPLHT SHTIDMSIVI WILWPDEERH SNPNIDKEVK KRLSPEAAEA ANRSGRWRNQ IRRVAHNGCC RRVAQTRALC SALWKILVSE
1701: ELLQALTTIE MPLVNVLADM ELWGIGIDIE GCLRARNILR DKLRSLEKKA FELAGMTFSL HNPADIANVL FGQLKLPIPE NQSKGKLHPS TDKHCLDLLR
1801: NEHPVVPIIK EHRTLAKLLN CTLGSICSLA KLRLSTQRYT LHGRWLQTST ATGRLSIEEP NLQSVEHEVE FKLDKNGRDV SSDADRYKIN ARDFFVPTQE
1901: NWLLLTADYS QIELRLMAHF SRDSSLISKL SQPEGDVFTM IAAKWTGKAE DSVSPHDRDQ TKRLIYGILY GMGANRLAEQ LECTSDEAKE KIRSFKSSFP
2001: AVTSWLNETI SFCQEKGYIQ TLKGRRRFLS KIKFGNAKEK SKAQRQAVNS MCQGSAADII KIAMINIYSA IAEDVDTAAS SSSSETRFHM LKGRCRILLQ
2101: VHDELVLEVD PSYVKLAAML LQTSMENAVS LLVPLHVKLK VGKTWGSLEP FQTD
0101: FATFKECLGQ NGSQDLHKEG VAAETHATDG LLCANQKDNS ELRDFATSFL SLYCSGVQSV VGSPPHQKEN ELKRRSSSSS LAQDIQISHK RRCESENIPS
0201: LDDLTNPLGS KPESLARNGN NRDKPVSDPT KKMPSNESVE IPMGLRKCSK APESSAHLTE FHTPGSAIKS CPVGTPKSGC GSSMFSPGEA FWNEAIQVAD
0301: GLTIPIENFG SVEAKVRDQH VTILSCSKKT DKCTEKLERS LDLDEIRVKD KDAIGFSKVV EKHGRDFNKE VYQLPVKNLE LLFQDKNING GIQERCASFD
0401: QNNITLGSSR ISESAFVGNK GCENLDIANN AQADKGLIGK MYPEPEGKKV LLCEENRGVR SVSMISNMRK PVGSSESEES HTPSSSHRNY DGLSLSTWLP
0501: SEVCSVYNKK GISKLYPWQV ECLQVDGVLQ KRNLVYCAST SAGKSFVAEV LMLRRVIRTG KMALLVLPYV SICAEKAEHL EVLLEPLGKH VRSYYGNQGG
0601: GTLPKDTSVA VCTIEKANSL INRLLEEGRL SELGIIVIDE LHMVGDQHRG YLLELMLTKL RYAAGEGSSE SSSGESSGTS SGKADPAHGL QIVGMSATMP
0701: NVGAVADWLQ AALYQTEFRP VPLEEYIKVG STIYNKKMEV VRTIPKAADM GGKDPDHIVE LCNEVVQEGN SVLIFCSSRK GCESTARHIS KLIKNVPVNV
0801: DGENSEFMDI RSAIDALRRS PSGVDPVLEE TLPSGVAYHH AGLTVEEREI VETCYRKGLV RVLTATSTLA AGVNLPARRV IFRQPMIGRD FIDGTRYKQM
0901: SGRAGRTGID TKGDSVLICK PGELKRIMAL LNETCPPLQS CLSEDKNGMT HAILEVVAGG IVQTAKDIHR YVRCTLLNST KPFQDVVKSA QDSLRWLCHR
1001: KFLEWNEETK LYTTTPLGRG SFGSSLCPEE SLIVLDDLLR AREGLVMASD LHLVYLVTPI NVGVEPNWEL YYERFMELSP LEQSVGNRVG VVEPFLMRMA
1101: HGATVRTLNR PQDVKKNLRG EYDSRHGSTS MKMLSDEQML RVCKRFFVAL ILSKLVQEAS VTEVCEAFKV ARGMVQALQE NAGRFSSMVS VFCERLGWHD
1201: LEGLVAKFQN RVSFGVRAEI VELTSIPYIK GSRARALYKA GLRTSQAIAE ASIPEIVKAL FESSAWAAEG TGQRRIHLGL AKKIKNGARK IVLEKAEEAR
1301: AAAFSAFKSL GLDVNELSKP LPLAPASSLN GQETTERDIS RGSVGPDGLQ QSIEGHMECE NFDMDNHREK PSEVLGDATL GVSSEINLTS RLPNFRPIGT
1401: AVGTNGPSAV SILSSDTFPI PVYDNREIKP KDNVEQHLTR NDHIPLSSNK DGTGEKGPVT AGNISGGFDS FLELWGSAGE FFFDLHYNKL QDLNSRISYE
1501: IHGIAICWNC SPVYYVNLNK DLPNLECVEK QKLIEDAVIG KSEVLASHNM LDVIKSRWNK ISKIMGNVNT RKFTWNLKVQ IQVLKSPAIS IQRCTRLNLP
1601: EGIRDELVDG SWLMMPPLHT SHTIDMSIVI WILWPDEERH SNPNIDKEVK KRLSPEAAEA ANRSGRWRNQ IRRVAHNGCC RRVAQTRALC SALWKILVSE
1701: ELLQALTTIE MPLVNVLADM ELWGIGIDIE GCLRARNILR DKLRSLEKKA FELAGMTFSL HNPADIANVL FGQLKLPIPE NQSKGKLHPS TDKHCLDLLR
1801: NEHPVVPIIK EHRTLAKLLN CTLGSICSLA KLRLSTQRYT LHGRWLQTST ATGRLSIEEP NLQSVEHEVE FKLDKNGRDV SSDADRYKIN ARDFFVPTQE
1901: NWLLLTADYS QIELRLMAHF SRDSSLISKL SQPEGDVFTM IAAKWTGKAE DSVSPHDRDQ TKRLIYGILY GMGANRLAEQ LECTSDEAKE KIRSFKSSFP
2001: AVTSWLNETI SFCQEKGYIQ TLKGRRRFLS KIKFGNAKEK SKAQRQAVNS MCQGSAADII KIAMINIYSA IAEDVDTAAS SSSSETRFHM LKGRCRILLQ
2101: VHDELVLEVD PSYVKLAAML LQTSMENAVS LLVPLHVKLK VGKTWGSLEP FQTD
Arabidopsis Description
TEBHelicase and polymerase-containing protein TEBICHI [Source:UniProtKB/Swiss-Prot;Acc:Q588V7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.