Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037575 | Potato | cytosol, extracellular | 8.29 | 80.62 |
| Bra040938.1-P | Field mustard | nucleus | 97.94 | 71.65 |
| CDY23339 | Canola | nucleus | 91.13 | 70.51 |
| CDX75273 | Canola | nucleus | 87.47 | 67.71 |
| CDX68881 | Canola | nucleus | 89.07 | 66.76 |
| Solyc08g068120.1.1 | Tomato | cytosol, nucleus, plastid | 62.15 | 66.64 |
| AT4G32700.2 | Thale cress | nucleus | 91.45 | 66.06 |
| HORVU1Hr1G065680.1 | Barley | nucleus | 59.58 | 54.72 |
| VIT_04s0008g03960.t01 | Wine grape | nucleus | 73.46 | 52.97 |
| KRH16213 | Soybean | nucleus | 70.82 | 51.33 |
| GSMUA_Achr11P... | Banana | nucleus | 65.36 | 49.78 |
| TraesCS1A01G323500.1 | Wheat | plastid | 65.62 | 49.49 |
| Os12t0291000-00 | Rice | nucleus | 65.23 | 49.49 |
| TraesCS1D01G324400.1 | Wheat | plastid | 65.42 | 49.35 |
| TraesCS1B01G336400.1 | Wheat | plastid | 65.68 | 49.09 |
| HORVU0Hr1G026710.1 | Barley | plastid | 59.7 | 48.18 |
| OQU79067 | Sorghum | plastid | 63.88 | 47.83 |
| Zm00001d023796_P033 | Maize | nucleus, plastid | 63.56 | 47.23 |
| CDY51662 | Canola | nucleus | 17.8 | 36.07 |
| Solyc08g068110.1.1 | Tomato | nucleus | 10.67 | 23.55 |
| CDY49767 | Canola | nucleus | 12.79 | 17.59 |
| CDY03992 | Canola | nucleus | 12.72 | 17.44 |
| CDY45149 | Canola | nucleus | 3.79 | 15.61 |
| CDY30903 | Canola | nucleus | 9.64 | 15.2 |
| CDY56796 | Canola | cytosol | 8.93 | 15.19 |
| CDY65064 | Canola | nucleus | 9.64 | 15.14 |
| CDY01343 | Canola | cytosol | 3.15 | 15.08 |
| CDY28773 | Canola | cytosol | 3.15 | 15.08 |
| CDY48646 | Canola | cytosol | 3.15 | 15.08 |
| CDY31854 | Canola | cytosol | 3.15 | 15.08 |
| CDY45148 | Canola | endoplasmic reticulum | 5.91 | 14.79 |
| CDY44724 | Canola | cytosol | 9.0 | 14.17 |
| CDY41593 | Canola | cytosol | 8.93 | 14.03 |
| CDX76355 | Canola | cytosol | 11.38 | 13.65 |
| CDY22275 | Canola | cytosol, nucleus, plasma membrane | 9.13 | 13.38 |
| CDY38782 | Canola | plastid | 9.96 | 13.3 |
| CDY11624 | Canola | plastid | 9.7 | 13.11 |
| CDY22556 | Canola | cytosol | 16.45 | 12.17 |
| CDY48648 | Canola | nucleus | 7.97 | 12.05 |
| CDX86107 | Canola | nucleus | 10.09 | 11.67 |
| CDX99082 | Canola | cytosol | 8.93 | 11.63 |
| CDY33604 | Canola | cytosol | 2.06 | 10.88 |
| CDY47017 | Canola | cytosol | 8.1 | 10.46 |
| CDY47018 | Canola | cytosol | 4.69 | 10.24 |
| CDY42855 | Canola | nucleus, plastid | 13.24 | 9.71 |
| CDY52687 | Canola | cytosol, mitochondrion | 5.14 | 9.32 |
| CDY04587 | Canola | plastid | 1.67 | 7.1 |
| CDY31853 | Canola | nucleus | 4.5 | 5.83 |
| CDY01342 | Canola | cytosol | 3.47 | 4.87 |
| CDX76356 | Canola | nucleus | 0.13 | 0.51 |
| CDX75272 | Canola | nucleus | 0.0 | 0.0 |
| CDX68879 | Canola | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
Description
BnaC03g67000DBnaC03g67000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INY4]
Coordinates
chrLK033017:-:23483..31689
Molecular Weight (calculated)
173100.0 Da
IEP (calculated)
8.022
GRAVY (calculated)
-0.215
Length
1556 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRMSLFCLQV DGVLEKRNLV YCASTSAGKS FVAEVLMLRR VITTGKMALL VLPYVSICAE KAEHLELLLE PLGKQVRSYF GNQGGGTLPK GTAVAVCTIE
0101: KANSLINRLL EEGRLSELGI IVIDELHMVG DQHRGYLLEL MLTKLRYAAG EGSSESSSGE SSGNSSGKTD PTHGLQIVGM SATMPNVGAV ADWLQAALYQ
0201: TEFRPVPLEE YIKVGNTIYN KKMEVVRTIP KAADMGGKDP DHIIELCNEV VQEGNSVLIF CSSRKGCEST ARHISKLIKK VPIDVDGEHS EFMDIQSAID
0301: ALRRSPSGVD PVLEETLPFG VAYHHAGLTV EEREIVETCY RKGLVRVLTA TSTLAAGVNL PARRVIFRQP MIGRDFLDGT RYKQMAGRAG RTGIDTKGES
0401: VLICKPGELK RIMALLNESC PPLESCLSED KNGMTHAILE VVAGGIVQTA KDIHRYVRCT LLNSTKPFQD VVKSAQDSLR WLCHRKFLEW NEETKLYTTT
0501: PLGRGAFGSS LCPEESLIVL DDLLRARDGL VMASDLHLVY LITPINVGVE PNWELYYERF MELSPLEQSV GNRVGVVEPF LMRMAHGATV RTLKKPQDVN
0601: KKLRGEYNNR HGSTSSKMLS DEEMLRVCKR FFVALILSKL VQEASVSEVC EAYKVARGMV QALQENAGRF SSMVSVFCER LGWHDLEGLV AKLQNRVSFG
0701: VRAEIVELTS IPYIKGSRAR ALYKAGLRTC QAIAEASIPE IVKALFETSA WAEEGTGQRR IHLGLAKKIK NGARKIVLEK AEEARAAAFS AFKSLGLDVH
0801: DLSNPLPLAP ARSPNRQVTI ERDISGGSVV NLADTLPEIQ PIGTTVGTDG PNAVSILSSD DREIKIEDNA EQQLTRSAQI PLSNKDNAGE KGPLTAGNIS
0901: GGFDSFLNLW ESAEEFFFDI HYSKLQNLNS RISYEIHGIA ICWNGSPVYY VNLNKDLPNL ESRWNRINKI MGNENTRKFT WNLKNQIQVL KSPAISIQRC
1001: ARLNLAEVVR DHELVDGSWL VMLPLRISHT IDMSIVSWIL WPDEERHSNP NIDKEVKKRL SPEATEAANR SGRWRNQIRR VAHNGCCRRV AQTRALCSAL
1101: WKILVSEELI EALTATEMPL VNVLADMELW GIGVDIEGCI KARNVLRDKL RSLEKKAFEL AGMTFSLHSP ADISNVLFRQ LKLPIPENHN KGKLHPSTDK
1201: HCLDLLRNEH PVVPIIKEHR TLAKLLNSTL GSICSLAKLR LSTQRYTLHG HWLQTSTATG RLSIEEPNLQ SVEHEVEFIL DKSGKEDRYK INARDFFVPT
1301: QENWLLLTAD YSQIELRLMA HFSRDSSLIA QLSQPEGDVF TMIAAKWTGK TEDSVGPHDR DQTKRLIYGI LYGMGANRLA EQLECSSDEA KEKIRSFKSS
1401: FPAVTSWLNE TVSFCQEKGY IQTLKGRRRF LSKIKFGNAK EKSKAQRQAV NSVCQGSAAD IIKIATINIY SAISEDVNTS ASSSSTEARF HMLKGRCRIL
1501: LQVHDELVLE VDPSYAKEAA MLLQSSMENA VSLLVPLHVK LKIGKTWGSL EPLQAD
0101: KANSLINRLL EEGRLSELGI IVIDELHMVG DQHRGYLLEL MLTKLRYAAG EGSSESSSGE SSGNSSGKTD PTHGLQIVGM SATMPNVGAV ADWLQAALYQ
0201: TEFRPVPLEE YIKVGNTIYN KKMEVVRTIP KAADMGGKDP DHIIELCNEV VQEGNSVLIF CSSRKGCEST ARHISKLIKK VPIDVDGEHS EFMDIQSAID
0301: ALRRSPSGVD PVLEETLPFG VAYHHAGLTV EEREIVETCY RKGLVRVLTA TSTLAAGVNL PARRVIFRQP MIGRDFLDGT RYKQMAGRAG RTGIDTKGES
0401: VLICKPGELK RIMALLNESC PPLESCLSED KNGMTHAILE VVAGGIVQTA KDIHRYVRCT LLNSTKPFQD VVKSAQDSLR WLCHRKFLEW NEETKLYTTT
0501: PLGRGAFGSS LCPEESLIVL DDLLRARDGL VMASDLHLVY LITPINVGVE PNWELYYERF MELSPLEQSV GNRVGVVEPF LMRMAHGATV RTLKKPQDVN
0601: KKLRGEYNNR HGSTSSKMLS DEEMLRVCKR FFVALILSKL VQEASVSEVC EAYKVARGMV QALQENAGRF SSMVSVFCER LGWHDLEGLV AKLQNRVSFG
0701: VRAEIVELTS IPYIKGSRAR ALYKAGLRTC QAIAEASIPE IVKALFETSA WAEEGTGQRR IHLGLAKKIK NGARKIVLEK AEEARAAAFS AFKSLGLDVH
0801: DLSNPLPLAP ARSPNRQVTI ERDISGGSVV NLADTLPEIQ PIGTTVGTDG PNAVSILSSD DREIKIEDNA EQQLTRSAQI PLSNKDNAGE KGPLTAGNIS
0901: GGFDSFLNLW ESAEEFFFDI HYSKLQNLNS RISYEIHGIA ICWNGSPVYY VNLNKDLPNL ESRWNRINKI MGNENTRKFT WNLKNQIQVL KSPAISIQRC
1001: ARLNLAEVVR DHELVDGSWL VMLPLRISHT IDMSIVSWIL WPDEERHSNP NIDKEVKKRL SPEATEAANR SGRWRNQIRR VAHNGCCRRV AQTRALCSAL
1101: WKILVSEELI EALTATEMPL VNVLADMELW GIGVDIEGCI KARNVLRDKL RSLEKKAFEL AGMTFSLHSP ADISNVLFRQ LKLPIPENHN KGKLHPSTDK
1201: HCLDLLRNEH PVVPIIKEHR TLAKLLNSTL GSICSLAKLR LSTQRYTLHG HWLQTSTATG RLSIEEPNLQ SVEHEVEFIL DKSGKEDRYK INARDFFVPT
1301: QENWLLLTAD YSQIELRLMA HFSRDSSLIA QLSQPEGDVF TMIAAKWTGK TEDSVGPHDR DQTKRLIYGI LYGMGANRLA EQLECSSDEA KEKIRSFKSS
1401: FPAVTSWLNE TVSFCQEKGY IQTLKGRRRF LSKIKFGNAK EKSKAQRQAV NSVCQGSAAD IIKIATINIY SAISEDVNTS ASSSSTEARF HMLKGRCRIL
1501: LQVHDELVLE VDPSYAKEAA MLLQSSMENA VSLLVPLHVK LKIGKTWGSL EPLQAD
0001: MDSDSSKSRI DQFYVSKKRK HQSPNLKSGR NEKNVKVTGE RSPGDKGTLD SYLKASLDDK STTNSGLQAR QEAFTRKLDL EVSASSVGQN IHPCLPKPVS
0101: FATFKECLGQ NGSQDLHKEG VAAETHATDG LLCANQKDNS ELRDFATSFL SLYCSGVQSV VGSPPHQKEN ELKRRSSSSS LAQDIQISHK RRCESENIPS
0201: LDDLTNPLGS KPESLARNGN NRDKPVSDPT KKMPSNESVE IPMGLRKCSK APESSAHLTE FHTPGSAIKS CPVGTPKSGC GSSMFSPGEA FWNEAIQVAD
0301: GLTIPIENFG SVEAKVRDQH VTILSCSKKT DKCTEKLERS LDLDEIRVKD KDAIGFSKVV EKHGRDFNKE VYQLPVKNLE LLFQDKNING GIQERCASFD
0401: QNNITLGSSR ISESAFVGNK GCENLDIANN AQADKGLIGK MYPEPEGKKV LLCEENRGVR SVSMISNMRK PVGSSESEES HTPSSSHRNY DGLSLSTWLP
0501: SEVCSVYNKK GISKLYPWQV ECLQVDGVLQ KRNLVYCAST SAGKSFVAEV LMLRRVIRTG KMALLVLPYV SICAEKAEHL EVLLEPLGKH VRSYYGNQGG
0601: GTLPKDTSVA VCTIEKANSL INRLLEEGRL SELGIIVIDE LHMVGDQHRG YLLELMLTKL RYAAGEGSSE SSSGESSGTS SGKADPAHGL QIVGMSATMP
0701: NVGAVADWLQ AALYQTEFRP VPLEEYIKVG STIYNKKMEV VRTIPKAADM GGKDPDHIVE LCNEVVQEGN SVLIFCSSRK GCESTARHIS KLIKNVPVNV
0801: DGENSEFMDI RSAIDALRRS PSGVDPVLEE TLPSGVAYHH AGLTVEEREI VETCYRKGLV RVLTATSTLA AGVNLPARRV IFRQPMIGRD FIDGTRYKQM
0901: SGRAGRTGID TKGDSVLICK PGELKRIMAL LNETCPPLQS CLSEDKNGMT HAILEVVAGG IVQTAKDIHR YVRCTLLNST KPFQDVVKSA QDSLRWLCHR
1001: KFLEWNEETK LYTTTPLGRG SFGSSLCPEE SLIVLDDLLR AREGLVMASD LHLVYLVTPI NVGVEPNWEL YYERFMELSP LEQSVGNRVG VVEPFLMRMA
1101: HGATVRTLNR PQDVKKNLRG EYDSRHGSTS MKMLSDEQML RVCKRFFVAL ILSKLVQEAS VTEVCEAFKV ARGMVQALQE NAGRFSSMVS VFCERLGWHD
1201: LEGLVAKFQN RVSFGVRAEI VELTSIPYIK GSRARALYKA GLRTSQAIAE ASIPEIVKAL FESSAWAAEG TGQRRIHLGL AKKIKNGARK IVLEKAEEAR
1301: AAAFSAFKSL GLDVNELSKP LPLAPASSLN GQETTERDIS RGSVGPDGLQ QSIEGHMECE NFDMDNHREK PSEVLGDATL GVSSEINLTS RLPNFRPIGT
1401: AVGTNGPSAV SILSSDTFPI PVYDNREIKP KDNVEQHLTR NDHIPLSSNK DGTGEKGPVT AGNISGGFDS FLELWGSAGE FFFDLHYNKL QDLNSRISYE
1501: IHGIAICWNC SPVYYVNLNK DLPNLECVEK QKLIEDAVIG KSEVLASHNM LDVIKSRWNK ISKIMGNVNT RKFTWNLKVQ IQVLKSPAIS IQRCTRLNLP
1601: EGIRDELVDG SWLMMPPLHT SHTIDMSIVI WILWPDEERH SNPNIDKEVK KRLSPEAAEA ANRSGRWRNQ IRRVAHNGCC RRVAQTRALC SALWKILVSE
1701: ELLQALTTIE MPLVNVLADM ELWGIGIDIE GCLRARNILR DKLRSLEKKA FELAGMTFSL HNPADIANVL FGQLKLPIPE NQSKGKLHPS TDKHCLDLLR
1801: NEHPVVPIIK EHRTLAKLLN CTLGSICSLA KLRLSTQRYT LHGRWLQTST ATGRLSIEEP NLQSVEHEVE FKLDKNGRDV SSDADRYKIN ARDFFVPTQE
1901: NWLLLTADYS QIELRLMAHF SRDSSLISKL SQPEGDVFTM IAAKWTGKAE DSVSPHDRDQ TKRLIYGILY GMGANRLAEQ LECTSDEAKE KIRSFKSSFP
2001: AVTSWLNETI SFCQEKGYIQ TLKGRRRFLS KIKFGNAKEK SKAQRQAVNS MCQGSAADII KIAMINIYSA IAEDVDTAAS SSSSETRFHM LKGRCRILLQ
2101: VHDELVLEVD PSYVKLAAML LQTSMENAVS LLVPLHVKLK VGKTWGSLEP FQTD
0101: FATFKECLGQ NGSQDLHKEG VAAETHATDG LLCANQKDNS ELRDFATSFL SLYCSGVQSV VGSPPHQKEN ELKRRSSSSS LAQDIQISHK RRCESENIPS
0201: LDDLTNPLGS KPESLARNGN NRDKPVSDPT KKMPSNESVE IPMGLRKCSK APESSAHLTE FHTPGSAIKS CPVGTPKSGC GSSMFSPGEA FWNEAIQVAD
0301: GLTIPIENFG SVEAKVRDQH VTILSCSKKT DKCTEKLERS LDLDEIRVKD KDAIGFSKVV EKHGRDFNKE VYQLPVKNLE LLFQDKNING GIQERCASFD
0401: QNNITLGSSR ISESAFVGNK GCENLDIANN AQADKGLIGK MYPEPEGKKV LLCEENRGVR SVSMISNMRK PVGSSESEES HTPSSSHRNY DGLSLSTWLP
0501: SEVCSVYNKK GISKLYPWQV ECLQVDGVLQ KRNLVYCAST SAGKSFVAEV LMLRRVIRTG KMALLVLPYV SICAEKAEHL EVLLEPLGKH VRSYYGNQGG
0601: GTLPKDTSVA VCTIEKANSL INRLLEEGRL SELGIIVIDE LHMVGDQHRG YLLELMLTKL RYAAGEGSSE SSSGESSGTS SGKADPAHGL QIVGMSATMP
0701: NVGAVADWLQ AALYQTEFRP VPLEEYIKVG STIYNKKMEV VRTIPKAADM GGKDPDHIVE LCNEVVQEGN SVLIFCSSRK GCESTARHIS KLIKNVPVNV
0801: DGENSEFMDI RSAIDALRRS PSGVDPVLEE TLPSGVAYHH AGLTVEEREI VETCYRKGLV RVLTATSTLA AGVNLPARRV IFRQPMIGRD FIDGTRYKQM
0901: SGRAGRTGID TKGDSVLICK PGELKRIMAL LNETCPPLQS CLSEDKNGMT HAILEVVAGG IVQTAKDIHR YVRCTLLNST KPFQDVVKSA QDSLRWLCHR
1001: KFLEWNEETK LYTTTPLGRG SFGSSLCPEE SLIVLDDLLR AREGLVMASD LHLVYLVTPI NVGVEPNWEL YYERFMELSP LEQSVGNRVG VVEPFLMRMA
1101: HGATVRTLNR PQDVKKNLRG EYDSRHGSTS MKMLSDEQML RVCKRFFVAL ILSKLVQEAS VTEVCEAFKV ARGMVQALQE NAGRFSSMVS VFCERLGWHD
1201: LEGLVAKFQN RVSFGVRAEI VELTSIPYIK GSRARALYKA GLRTSQAIAE ASIPEIVKAL FESSAWAAEG TGQRRIHLGL AKKIKNGARK IVLEKAEEAR
1301: AAAFSAFKSL GLDVNELSKP LPLAPASSLN GQETTERDIS RGSVGPDGLQ QSIEGHMECE NFDMDNHREK PSEVLGDATL GVSSEINLTS RLPNFRPIGT
1401: AVGTNGPSAV SILSSDTFPI PVYDNREIKP KDNVEQHLTR NDHIPLSSNK DGTGEKGPVT AGNISGGFDS FLELWGSAGE FFFDLHYNKL QDLNSRISYE
1501: IHGIAICWNC SPVYYVNLNK DLPNLECVEK QKLIEDAVIG KSEVLASHNM LDVIKSRWNK ISKIMGNVNT RKFTWNLKVQ IQVLKSPAIS IQRCTRLNLP
1601: EGIRDELVDG SWLMMPPLHT SHTIDMSIVI WILWPDEERH SNPNIDKEVK KRLSPEAAEA ANRSGRWRNQ IRRVAHNGCC RRVAQTRALC SALWKILVSE
1701: ELLQALTTIE MPLVNVLADM ELWGIGIDIE GCLRARNILR DKLRSLEKKA FELAGMTFSL HNPADIANVL FGQLKLPIPE NQSKGKLHPS TDKHCLDLLR
1801: NEHPVVPIIK EHRTLAKLLN CTLGSICSLA KLRLSTQRYT LHGRWLQTST ATGRLSIEEP NLQSVEHEVE FKLDKNGRDV SSDADRYKIN ARDFFVPTQE
1901: NWLLLTADYS QIELRLMAHF SRDSSLISKL SQPEGDVFTM IAAKWTGKAE DSVSPHDRDQ TKRLIYGILY GMGANRLAEQ LECTSDEAKE KIRSFKSSFP
2001: AVTSWLNETI SFCQEKGYIQ TLKGRRRFLS KIKFGNAKEK SKAQRQAVNS MCQGSAADII KIAMINIYSA IAEDVDTAAS SSSSETRFHM LKGRCRILLQ
2101: VHDELVLEVD PSYVKLAAML LQTSMENAVS LLVPLHVKLK VGKTWGSLEP FQTD
Arabidopsis Description
TEBHelicase and polymerase-containing protein TEBICHI [Source:UniProtKB/Swiss-Prot;Acc:Q588V7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.