Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11624 | Canola | plastid | 97.34 | 98.44 |
| Bra016240.1-P | Field mustard | plastid | 97.94 | 97.86 |
| AT1G70070.1 | Thale cress | plastid | 91.33 | 90.86 |
| VIT_01s0026g01000.t01 | Wine grape | cytosol | 68.33 | 74.81 |
| PGSC0003DMT400058295 | Potato | plastid | 69.27 | 69.81 |
| Solyc05g006530.2.1 | Tomato | nucleus | 68.41 | 69.06 |
| KRH74713 | Soybean | nucleus | 68.15 | 68.33 |
| Os02t0739000-01 | Rice | plastid, vacuole | 63.0 | 62.26 |
| TraesCS6D01G291500.1 | Wheat | plastid | 62.83 | 62.14 |
| Zm00001d017982_P001 | Maize | plastid | 62.06 | 61.53 |
| GSMUA_Achr8P22600_001 | Banana | plastid | 63.43 | 61.28 |
| HORVU6Hr1G076860.2 | Barley | plastid | 62.66 | 61.04 |
| TraesCS6B01G342300.1 | Wheat | plastid | 62.66 | 60.73 |
| TraesCS6A01G312100.1 | Wheat | plastid | 62.75 | 60.71 |
| OQU85441 | Sorghum | plastid | 61.46 | 60.17 |
| CDY45149 | Canola | nucleus | 9.27 | 28.57 |
| CDY30903 | Canola | nucleus | 20.52 | 24.21 |
| CDY65064 | Canola | nucleus | 20.0 | 23.51 |
| CDY44724 | Canola | cytosol | 19.83 | 23.38 |
| CDY41593 | Canola | cytosol | 19.83 | 23.31 |
| CDY45148 | Canola | endoplasmic reticulum | 11.67 | 21.86 |
| CDX99082 | Canola | cytosol | 18.8 | 18.33 |
| CDX86107 | Canola | nucleus | 20.94 | 18.14 |
| CDY33604 | Canola | cytosol | 3.78 | 14.97 |
| CDY56796 | Canola | cytosol | 10.04 | 12.79 |
| CDY03992 | Canola | nucleus | 12.02 | 12.33 |
| CDY49767 | Canola | nucleus | 11.93 | 12.29 |
| CDY22275 | Canola | cytosol, nucleus, plasma membrane | 9.96 | 10.93 |
| CDY48648 | Canola | nucleus | 9.36 | 10.59 |
| CDY47017 | Canola | cytosol | 10.39 | 10.04 |
| CDY51661 | Canola | nucleus | 13.3 | 9.96 |
| CDX76355 | Canola | cytosol | 9.53 | 8.56 |
| CDY04587 | Canola | plastid | 2.66 | 8.47 |
| CDX75273 | Canola | nucleus | 13.91 | 8.06 |
| CDY22556 | Canola | cytosol | 14.42 | 7.99 |
| CDY23339 | Canola | nucleus | 13.73 | 7.96 |
| CDX68881 | Canola | nucleus | 14.16 | 7.95 |
| CDY42855 | Canola | nucleus, plastid | 13.48 | 7.4 |
| CDY51662 | Canola | nucleus | 4.72 | 7.16 |
| CDY31853 | Canola | nucleus | 4.72 | 4.58 |
| CDY47018 | Canola | cytosol | 2.58 | 4.21 |
| CDY01343 | Canola | cytosol | 1.12 | 4.0 |
| CDY48646 | Canola | cytosol | 1.12 | 4.0 |
| CDY31854 | Canola | cytosol | 1.12 | 4.0 |
| CDY28773 | Canola | cytosol | 1.12 | 4.0 |
| CDY01342 | Canola | cytosol | 3.78 | 3.97 |
| CDY52687 | Canola | cytosol, mitochondrion | 2.83 | 3.85 |
| CDX76356 | Canola | nucleus | 0.69 | 2.02 |
| CDX75272 | Canola | nucleus | 0.0 | 0.0 |
| CDX68879 | Canola | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.3380.30 | MapMan:16.12.2.1.1.3 | Gene3D:3.40.50.300 | GO:A0A078HLM0 | UniProt:A0A078HLM0 | EnsemblPlants:CDY38782 |
| ProteinID:CDY38782 | ProteinID:CDY38782.1 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00066581001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF08148 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF360 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM01142 | SUPFAM:SSF52540 | InterPro:Ski2_C | UniParc:UPI0004EF16B5 | SEG:seg | : |
Description
BnaA07g28540DBnaA07g28540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLM0]
Coordinates
chrLK032432:-:209721..213911
Molecular Weight (calculated)
131548.0 Da
IEP (calculated)
5.143
GRAVY (calculated)
-0.371
Length
1165 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNTLPVVSLT PSSSFKFFHF PSPLSHSPSF RFTTTPLILR PTPPSRQSHL SLKSLSPSQS QLSEDYDEDE DEDEEDEDDD EAADEYDDIT DETRNTDDDE
0101: PEFPVDSPPE SSRQRVEFRW QRVEKLRSLV RDFGVEMIDI DELVSIYDFR IDKFQRLAIE AFLRGSSVVV SAPTSSGKTL IAEAAAVATV ARGRRLFYTT
0201: PLKALSNQKF REFRETFGDD NVGLLTGDSA INKDAQIVIM TTEILRNMLY QSVGMASSGT GLFHVDAIVL DEVHYLSDIS RGTVWEEIVI YCPKEVQLIC
0301: LSATVANPDE LAGWIGEIHG KTELVTSTRR PVPLTWYFST KHSLLPLLDE KGIHVNSRKL SLNYLQMSAS EARYRDDDDG RRGRRSRKRG GDTSYNSLVN
0401: ISDYPLTKNE INKIRRSQVP QISDTLWHLQ GKDMLPAIWF IFNRRGCDAA VQYVENFQLL DDCEKGEVEL ALRKFRVLYP DAVRESAEKG LLRGIAAHHA
0501: GCLPLWKSFI EELFQRGLVK VVFATETLAA GINMPARTAV ISSLTKKAGN ERIQLGPNEL FQMAGRAGRR GIDDKGYTVL VQTAFEGAEE CCKLVFAGVK
0601: PLVSQFTASY GMVLNLVAGS KVTRKSNGSE DGKVLQAGRS LEEAKKLVEK SFGNYVSSNV MVAAKEELAE IDKKIEILTS EISDEAIDKK SRKLLSANQY
0701: KEITALQGEL REEKRKRTEF RKRMELERFS ALKPLLKGME DGNLPFICLE FKDSEGMQQS VPAVYLGHID SFNGSKLQKM MSLDESFALN VIEDEPAADE
0801: PIVKPSYYVA LGSDNSWYLF TEKWIRTVYR TGFPNTALAI GDALPREIMK ALLDKADMQW DKLSESELGS MWRMEGSLET WSWSLNVPVL SSLSEEDEVL
0901: HMSQEYDNAA EQYKEQRSKV SRLKKRISRS AGFREYKKIL ENAKLTVEKM KRLKARSRRL INRLEQIEPS GWKDFMRISN VIHESRALDI NTHLIFPLGE
1001: TAAAIRGENE LWLAMVLRNK VLVDLKPPQL AGVCASLVSE GIKVRPWRDN NYIYEPSDTV VDVVNFLEEQ RSSLIKLQEK HEVEISCCLD VQFSGMVEAW
1101: ASGLSWKEMM MECAMDEGDL ARLLRRTIDL LAQIPKLPDI DPTLQRSAAA AADIMDRPPI SELAG
0101: PEFPVDSPPE SSRQRVEFRW QRVEKLRSLV RDFGVEMIDI DELVSIYDFR IDKFQRLAIE AFLRGSSVVV SAPTSSGKTL IAEAAAVATV ARGRRLFYTT
0201: PLKALSNQKF REFRETFGDD NVGLLTGDSA INKDAQIVIM TTEILRNMLY QSVGMASSGT GLFHVDAIVL DEVHYLSDIS RGTVWEEIVI YCPKEVQLIC
0301: LSATVANPDE LAGWIGEIHG KTELVTSTRR PVPLTWYFST KHSLLPLLDE KGIHVNSRKL SLNYLQMSAS EARYRDDDDG RRGRRSRKRG GDTSYNSLVN
0401: ISDYPLTKNE INKIRRSQVP QISDTLWHLQ GKDMLPAIWF IFNRRGCDAA VQYVENFQLL DDCEKGEVEL ALRKFRVLYP DAVRESAEKG LLRGIAAHHA
0501: GCLPLWKSFI EELFQRGLVK VVFATETLAA GINMPARTAV ISSLTKKAGN ERIQLGPNEL FQMAGRAGRR GIDDKGYTVL VQTAFEGAEE CCKLVFAGVK
0601: PLVSQFTASY GMVLNLVAGS KVTRKSNGSE DGKVLQAGRS LEEAKKLVEK SFGNYVSSNV MVAAKEELAE IDKKIEILTS EISDEAIDKK SRKLLSANQY
0701: KEITALQGEL REEKRKRTEF RKRMELERFS ALKPLLKGME DGNLPFICLE FKDSEGMQQS VPAVYLGHID SFNGSKLQKM MSLDESFALN VIEDEPAADE
0801: PIVKPSYYVA LGSDNSWYLF TEKWIRTVYR TGFPNTALAI GDALPREIMK ALLDKADMQW DKLSESELGS MWRMEGSLET WSWSLNVPVL SSLSEEDEVL
0901: HMSQEYDNAA EQYKEQRSKV SRLKKRISRS AGFREYKKIL ENAKLTVEKM KRLKARSRRL INRLEQIEPS GWKDFMRISN VIHESRALDI NTHLIFPLGE
1001: TAAAIRGENE LWLAMVLRNK VLVDLKPPQL AGVCASLVSE GIKVRPWRDN NYIYEPSDTV VDVVNFLEEQ RSSLIKLQEK HEVEISCCLD VQFSGMVEAW
1101: ASGLSWKEMM MECAMDEGDL ARLLRRTIDL LAQIPKLPDI DPTLQRSAAA AADIMDRPPI SELAG
0001: MNTLPVVSLT ASSSFKFFHF PSLHRSLSHS PNFSFTKSLI LNPNHLSFKS TLNSLSPSQS QLYEEEDDEE EEEEDEDDDD EAADEYDNIS DEIRNSDDDD
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
Arabidopsis Description
ISE2DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.