Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017982_P001 | Maize | plastid | 91.34 | 92.51 |
| Os02t0739000-01 | Rice | plastid, vacuole | 86.22 | 87.02 |
| TraesCS6D01G291500.1 | Wheat | plastid | 83.11 | 83.96 |
| HORVU6Hr1G076860.2 | Barley | plastid | 82.86 | 82.44 |
| TraesCS6A01G312100.1 | Wheat | plastid | 83.28 | 82.31 |
| TraesCS6B01G342300.1 | Wheat | plastid | 83.03 | 82.2 |
| VIT_01s0026g01000.t01 | Wine grape | cytosol | 61.93 | 69.27 |
| GSMUA_Achr8P22600_001 | Banana | plastid | 66.97 | 66.09 |
| Solyc05g006530.2.1 | Tomato | nucleus | 62.02 | 63.95 |
| PGSC0003DMT400058295 | Potato | plastid | 62.02 | 63.84 |
| KRH74713 | Soybean | nucleus | 61.01 | 62.48 |
| CDY38782 | Canola | plastid | 60.17 | 61.46 |
| Bra016240.1-P | Field mustard | plastid | 59.92 | 61.15 |
| CDY11624 | Canola | plastid | 58.91 | 60.85 |
| AT1G70070.1 | Thale cress | plastid | 58.82 | 59.78 |
| EER87693 | Sorghum | cytosol | 20.5 | 24.38 |
| EES02351 | Sorghum | nucleus | 20.17 | 23.9 |
| KXG29518 | Sorghum | cytosol | 20.08 | 17.43 |
| OQU85316 | Sorghum | nucleus | 11.26 | 10.35 |
| KXG39883 | Sorghum | mitochondrion | 14.29 | 8.16 |
| OQU79067 | Sorghum | plastid | 13.87 | 7.94 |
| EER99779 | Sorghum | cytosol | 13.87 | 7.56 |
| KXG37223 | Sorghum | cytosol | 13.95 | 7.53 |
| EES04337 | Sorghum | cytosol | 13.7 | 7.5 |
Protein Annotations
| Gene3D:1.10.3380.30 | MapMan:16.12.2.1.1.3 | Gene3D:3.40.50.300 | EntrezGene:8075739 | UniProt:A0A1Z5RPC1 | ncoils:Coil |
| InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000003 | GO:GO:0000166 | GO:GO:0000373 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006397 | GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009793 | GO:GO:0009987 | GO:GO:0010494 | GO:GO:0010497 | GO:GO:0016441 | GO:GO:0040029 |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | EnsemblPlants:OQU85441 | ProteinID:OQU85441 |
| ProteinID:OQU85441.1 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF08148 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF360 | SMART:SM00487 | SMART:SM00490 | SMART:SM01142 |
| EnsemblPlantsGene:SORBI_3004G244400 | SUPFAM:SSF52540 | unigene:Sbi.6856 | InterPro:Ski2_C | UniParc:UPI000B8B9942 | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:-:59195989..59204402
Molecular Weight (calculated)
135288.0 Da
IEP (calculated)
5.270
GRAVY (calculated)
-0.393
Length
1190 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHCIAPRLLL LPLPTVSRHA LSPTQTLPLP LLLPSRAVCR LHLASARSPS RAAASVSDDD EDEEVDVDDD DDEIGIRDVD DEDYDDFEDG DEGDEEAVDE
0101: ESVGEYEEEA EQDEDEREDT AARRRESEEY KSRRVVKLVA EVREFGEDII DYNELAGIYD FPIDKFQRLA IQAFLRGSSV VVSAPTSSGK TLIAEAAAVA
0201: TVARGRRLFY TTPLKALSNQ KFRDFRDTFG DHNVGLLTGD SAINKDAQIL IMTTEILRNM LYQSVGMTAS EGRLFQVDVI VLDEVHYLSD ISRGTVWEET
0301: VIYCPKEVQL ICLSATVANP DELAGWISQI HGKTELVTSN KRPVPLTWHF SKKYSLQPLL DGKGKKMNRK LRMSNFQNLA SPKSEFYYVK GKRRFRTNKI
0401: EQGNSSSFDI SKQVQLSKHE LSNMRRSQVP LIRDTLSQLW ENDMLPAIWF IFSRRGCDAA VEYLEDCRLL HDCEASEVEL ELRRFKMQYP DAVRESAVKG
0501: LLRGVAAHHA GCLPLWKSFI EELFQRGLVK VVFATETLAA GINMPARTAV ISSLSKRIDA GRQLLTPNEL FQMAGRAGRR GIDTVGHTVL VQTPYEGPEE
0601: CCDIIFAGLE PLVSQFTASY GMVLNLLAGS KVTHNQKESD DVNKVKRSGR TLEEARKLVE QSFGNYVGSN VMVAAKEEIE RIQQEIQYLS SEITDESTDR
0701: KCREELSEED YAEISLLQKR LKEEKQIRNE LKKKMELERM AAWKNRLEEF ENGHLPFMCL QYKDKDSIQH TIPAVFIGNL NSFADQKITN MVEDDSLVSG
0801: KQKLDSGEQL YCPSYYVALS SDNSWYLFTE KWIKTVYKTG LPAVASIEGG ALPRETLKQL LLREELMWDK VAKSEYGSLL SMDGSLDTWS WSLNVPVLNS
0901: LSEDDEVERF SQEHRDAVEC YKQQRRKVSH LKKTIRSTKG FKEFQKIIDI RNFTKEKIER LEARSRRLTR RIRQIEPTGW KEFLQISKVI QEARALDINT
1001: QVIYPLGETA AAIRGENELW LAMVLRNKVL LDLKPSQLAA VCGSLVSEGI KFRPWKNSSY VYEPSSVVIG VISYLEEQRN SLIDLQERHG VKIPCEIDAQ
1101: FAGMVEAWAS GLTWREIMMD SAMDDGDLAR LLRRSIDLLA QTLIQFSKRM HKLLAASWTE YRLVSLPVES PKPVSTTNRG FARLLILQLL
0101: ESVGEYEEEA EQDEDEREDT AARRRESEEY KSRRVVKLVA EVREFGEDII DYNELAGIYD FPIDKFQRLA IQAFLRGSSV VVSAPTSSGK TLIAEAAAVA
0201: TVARGRRLFY TTPLKALSNQ KFRDFRDTFG DHNVGLLTGD SAINKDAQIL IMTTEILRNM LYQSVGMTAS EGRLFQVDVI VLDEVHYLSD ISRGTVWEET
0301: VIYCPKEVQL ICLSATVANP DELAGWISQI HGKTELVTSN KRPVPLTWHF SKKYSLQPLL DGKGKKMNRK LRMSNFQNLA SPKSEFYYVK GKRRFRTNKI
0401: EQGNSSSFDI SKQVQLSKHE LSNMRRSQVP LIRDTLSQLW ENDMLPAIWF IFSRRGCDAA VEYLEDCRLL HDCEASEVEL ELRRFKMQYP DAVRESAVKG
0501: LLRGVAAHHA GCLPLWKSFI EELFQRGLVK VVFATETLAA GINMPARTAV ISSLSKRIDA GRQLLTPNEL FQMAGRAGRR GIDTVGHTVL VQTPYEGPEE
0601: CCDIIFAGLE PLVSQFTASY GMVLNLLAGS KVTHNQKESD DVNKVKRSGR TLEEARKLVE QSFGNYVGSN VMVAAKEEIE RIQQEIQYLS SEITDESTDR
0701: KCREELSEED YAEISLLQKR LKEEKQIRNE LKKKMELERM AAWKNRLEEF ENGHLPFMCL QYKDKDSIQH TIPAVFIGNL NSFADQKITN MVEDDSLVSG
0801: KQKLDSGEQL YCPSYYVALS SDNSWYLFTE KWIKTVYKTG LPAVASIEGG ALPRETLKQL LLREELMWDK VAKSEYGSLL SMDGSLDTWS WSLNVPVLNS
0901: LSEDDEVERF SQEHRDAVEC YKQQRRKVSH LKKTIRSTKG FKEFQKIIDI RNFTKEKIER LEARSRRLTR RIRQIEPTGW KEFLQISKVI QEARALDINT
1001: QVIYPLGETA AAIRGENELW LAMVLRNKVL LDLKPSQLAA VCGSLVSEGI KFRPWKNSSY VYEPSSVVIG VISYLEEQRN SLIDLQERHG VKIPCEIDAQ
1101: FAGMVEAWAS GLTWREIMMD SAMDDGDLAR LLRRSIDLLA QTLIQFSKRM HKLLAASWTE YRLVSLPVES PKPVSTTNRG FARLLILQLL
0001: MNTLPVVSLT ASSSFKFFHF PSLHRSLSHS PNFSFTKSLI LNPNHLSFKS TLNSLSPSQS QLYEEEDDEE EEEEDEDDDD EAADEYDNIS DEIRNSDDDD
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
Arabidopsis Description
ISE2DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.