Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G291500.1 | Wheat | plastid | 96.07 | 97.54 |
| TraesCS6A01G312100.1 | Wheat | plastid | 95.9 | 95.27 |
| TraesCS6B01G342300.1 | Wheat | plastid | 95.23 | 94.76 |
| Os02t0739000-01 | Rice | plastid, vacuole | 87.79 | 89.06 |
| Zm00001d017982_P001 | Maize | plastid | 83.78 | 85.28 |
| OQU85441 | Sorghum | plastid | 82.44 | 82.86 |
| VIT_01s0026g01000.t01 | Wine grape | cytosol | 62.37 | 70.11 |
| GSMUA_Achr8P22600_001 | Banana | plastid | 66.81 | 66.25 |
| Solyc05g006530.2.1 | Tomato | nucleus | 63.04 | 65.34 |
| PGSC0003DMT400058295 | Potato | plastid | 62.88 | 65.05 |
| KRH74713 | Soybean | nucleus | 62.12 | 63.94 |
| CDY38782 | Canola | plastid | 61.04 | 62.66 |
| Bra016240.1-P | Field mustard | plastid | 60.62 | 62.18 |
| CDY11624 | Canola | plastid | 59.78 | 62.07 |
| AT1G70070.1 | Thale cress | plastid | 59.7 | 60.97 |
| HORVU1Hr1G048420.1 | Barley | cytosol | 1.84 | 26.83 |
| HORVU2Hr1G028060.7 | Barley | cytosol | 20.07 | 23.86 |
| HORVU7Hr1G001080.1 | Barley | cytosol, nucleus, plastid | 19.82 | 22.77 |
| HORVU4Hr1G018990.9 | Barley | plastid | 19.65 | 22.66 |
| HORVU1Hr1G018080.31 | Barley | cytosol, nucleus, plastid | 4.68 | 19.18 |
| HORVU6Hr1G025670.1 | Barley | nucleus | 20.82 | 18.22 |
| HORVU4Hr1G049830.57 | Barley | nucleus | 11.79 | 12.57 |
| HORVU1Hr1G065680.1 | Barley | nucleus | 12.29 | 8.68 |
| HORVU4Hr1G068170.2 | Barley | cytosol, nucleus | 14.72 | 8.43 |
| HORVU0Hr1G026710.1 | Barley | plastid | 12.71 | 7.88 |
| HORVU6Hr1G004350.3 | Barley | cytosol, mitochondrion, nucleus | 13.8 | 7.53 |
| HORVU7Hr1G040480.2 | Barley | cytosol, mitochondrion | 12.96 | 7.21 |
Protein Annotations
| Gene3D:1.10.3380.30 | MapMan:16.12.2.1.1.3 | Gene3D:3.40.50.300 | UniProt:A0A287US11 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom |
| GO:GO:0000003 | GO:GO:0000166 | GO:GO:0000373 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006397 | GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 |
| GO:GO:0009987 | GO:GO:0010494 | GO:GO:0010497 | GO:GO:0016441 | GO:GO:0040029 | EnsemblPlantsGene:HORVU6Hr1G076860 |
| EnsemblPlants:HORVU6Hr1G076860.2 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:P-loop_NTPase |
| PFAM:PF00270 | PFAM:PF00271 | PFAM:PF08148 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR24031 |
| PANTHER:PTHR24031:SF360 | SMART:SM00487 | SMART:SM00490 | SMART:SM01142 | SUPFAM:SSF52540 | InterPro:Ski2_C |
| UniParc:UPI000B4778E8 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:527396277..527410758
Molecular Weight (calculated)
134798.0 Da
IEP (calculated)
5.686
GRAVY (calculated)
-0.433
Length
1196 amino acids
Sequence
(BLAST)
(BLAST)
0001: PASSGRMTSS PSPHPPAMHC LAPHFLLLLP LPTAPRHAPP QTPPPALLPP CRPAQSQAHA HAHAAPLHRP SARSPSRAAA PVSDEDEDEE PDEEEEEDEY
0101: ELDIRDVDYD EDDDGEGDEE LEEGSGGEDD EEGDAAAEDS RQETAERRQR SEQYKSQQVA KLVAEVREFG DDIIDYNELA GIYDFPIDRF QRLAIQAFLR
0201: GSSVVVSAPT SSGKTLIAEA AAVATVARGR RLFYTTPLKA LSNQKFREFR NTFGDHNVGL LTGDSAINKD AQILIMTTEI LRNMLYQSVG MSASDGRLFE
0301: VDVIVLDEVH YLSDISRGTV WEETVIYCPK EVQLICLSAT VANPDELAGW IGQIHGKTEL VTSSKRPVPL TWHFSKKFAL LPLLDGKGKK MNRKLRMSHV
0401: QNISSPKSDF YYVKGKRKVR TNKNEQGNRS PLDISKQVQL SKHEVTNMRR SQVPLIRDTL SQLWENDMLP AIWFIFSRRG CDAAVEYIED CRLLHDCEAS
0501: EVELELRRFR MQYPDAVREN AVKGLLRGVA AHHAGCLPLW KSFIEELFQR GLVKVVFATE TLAAGINMPA RTAVISSLSK RIDAGRQLLT PNNLFQMAGR
0601: AGRRGIDTVG HTVLVQTTNE GPEECCDVIF AGLEPLVSQF TASYGMVLNL LAGSKVTHKQ KESGDVKAKR SGRTLEEARK LVEQSFGNYV GSNVMVAAKE
0701: ELERIQKEIQ HLSSEITDEF IDRKCRKELS EEDYAEISLL QNKLKEEKKI RNELKKRMEL ERMAAWRTQL EEFESGHLPF MCLQYKDKDS VHHTIPAVFI
0801: GSLSSFDDQK IASMLEDDSI GPVKQEVDSE GQLHYPSYYV ALSSDNSWYL FTEKWIKTVY QTGLPAVPSV EGGPLPRETL KQLLLREDMI WDKIAKSEHG
0901: FLLCMDGSLD TWSWSLNVPV LNSLSEDDKV ERFSPEHQAA VESHKHQRRK VSQLKKTIRS TKGFREFQKI IDMRNFTKEK IERLEARSRR LTRRIMQIEP
1001: TGWKEFLQIS KVIQEARVLD INTQVIYPLG ETAAAIRGEN ELWLAMVLRN KVLLDLKPSQ LAAVCGSLVS EGIKLRPWKN SSFVYEPSSV VIGVINYLEE
1101: QRNSLLDLQE KHGVKIPCEI DTQFAGMVEA WASGLTWREI MMDSAMDDGD LARLLRRTMD LLAQIPKLPD IDPALQKNAQ IACSVMDRVP LSELAG
0101: ELDIRDVDYD EDDDGEGDEE LEEGSGGEDD EEGDAAAEDS RQETAERRQR SEQYKSQQVA KLVAEVREFG DDIIDYNELA GIYDFPIDRF QRLAIQAFLR
0201: GSSVVVSAPT SSGKTLIAEA AAVATVARGR RLFYTTPLKA LSNQKFREFR NTFGDHNVGL LTGDSAINKD AQILIMTTEI LRNMLYQSVG MSASDGRLFE
0301: VDVIVLDEVH YLSDISRGTV WEETVIYCPK EVQLICLSAT VANPDELAGW IGQIHGKTEL VTSSKRPVPL TWHFSKKFAL LPLLDGKGKK MNRKLRMSHV
0401: QNISSPKSDF YYVKGKRKVR TNKNEQGNRS PLDISKQVQL SKHEVTNMRR SQVPLIRDTL SQLWENDMLP AIWFIFSRRG CDAAVEYIED CRLLHDCEAS
0501: EVELELRRFR MQYPDAVREN AVKGLLRGVA AHHAGCLPLW KSFIEELFQR GLVKVVFATE TLAAGINMPA RTAVISSLSK RIDAGRQLLT PNNLFQMAGR
0601: AGRRGIDTVG HTVLVQTTNE GPEECCDVIF AGLEPLVSQF TASYGMVLNL LAGSKVTHKQ KESGDVKAKR SGRTLEEARK LVEQSFGNYV GSNVMVAAKE
0701: ELERIQKEIQ HLSSEITDEF IDRKCRKELS EEDYAEISLL QNKLKEEKKI RNELKKRMEL ERMAAWRTQL EEFESGHLPF MCLQYKDKDS VHHTIPAVFI
0801: GSLSSFDDQK IASMLEDDSI GPVKQEVDSE GQLHYPSYYV ALSSDNSWYL FTEKWIKTVY QTGLPAVPSV EGGPLPRETL KQLLLREDMI WDKIAKSEHG
0901: FLLCMDGSLD TWSWSLNVPV LNSLSEDDKV ERFSPEHQAA VESHKHQRRK VSQLKKTIRS TKGFREFQKI IDMRNFTKEK IERLEARSRR LTRRIMQIEP
1001: TGWKEFLQIS KVIQEARVLD INTQVIYPLG ETAAAIRGEN ELWLAMVLRN KVLLDLKPSQ LAAVCGSLVS EGIKLRPWKN SSFVYEPSSV VIGVINYLEE
1101: QRNSLLDLQE KHGVKIPCEI DTQFAGMVEA WASGLTWREI MMDSAMDDGD LARLLRRTMD LLAQIPKLPD IDPALQKNAQ IACSVMDRVP LSELAG
0001: MNTLPVVSLT ASSSFKFFHF PSLHRSLSHS PNFSFTKSLI LNPNHLSFKS TLNSLSPSQS QLYEEEDDEE EEEEDEDDDD EAADEYDNIS DEIRNSDDDD
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
Arabidopsis Description
ISE2DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.