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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus

Predictor Summary:
  • cytosol 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G247100.1 Wheat mitochondrion, peroxisome 97.89 98.41
TraesCS4B01G247900.1 Wheat mitochondrion, peroxisome 97.89 98.41
TraesCS4A01G057200.1 Wheat mitochondrion, peroxisome 97.85 98.36
KXG39883 Sorghum mitochondrion 87.55 87.76
Zm00001d048095_P005 Maize mitochondrion 87.17 87.38
VIT_17s0000g07230.t01 Wine grape cytosol 50.26 76.64
GSMUA_Achr8P28180_001 Banana cytosol 72.76 75.77
CDY47018 Canola cytosol 25.13 73.63
KRH54676 Soybean nucleus 71.52 71.55
Solyc06g069480.2.1 Tomato nucleus 71.18 71.22
CDY42855 Canola nucleus, plastid 70.13 69.07
AT5G61140.2 Thale cress plastid 71.28 69.03
Bra029333.1-P Field mustard plastid 69.89 68.45
CDY47017 Canola cytosol 39.06 67.72
VIT_17s0000g07240.t01 Wine grape cytosol 21.21 62.31
HORVU6Hr1G004350.3 Barley cytosol, mitochondrion, nucleus 39.73 37.9
HORVU7Hr1G040480.2 Barley cytosol, mitochondrion 37.53 36.47
HORVU4Hr1G049830.57 Barley nucleus 10.87 20.23
HORVU7Hr1G001080.1 Barley cytosol, nucleus, plastid 8.52 17.1
HORVU2Hr1G028060.7 Barley cytosol 7.9 16.4
HORVU4Hr1G018990.9 Barley plastid 7.8 15.72
HORVU6Hr1G076860.2 Barley plastid 8.43 14.72
HORVU6Hr1G025670.1 Barley nucleus 9.57 14.63
HORVU1Hr1G018080.31 Barley cytosol, nucleus, plastid 1.96 14.04
HORVU1Hr1G048420.1 Barley cytosol 0.53 13.41
HORVU1Hr1G065680.1 Barley nucleus 10.29 12.69
HORVU0Hr1G026710.1 Barley plastid 11.01 11.93
Protein Annotations
Gene3D:1.10.10.2530Gene3D:1.10.150.20Gene3D:1.10.3380.10Gene3D:2.60.40.150Gene3D:3.40.50.300MapMan:35.1
UniProt:A0A287PH83InterPro:AAA+_ATPaseInterPro:C2_domain_sfInterPro:DEAD/DEAH_box_helicase_domGO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003729GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:HORVU4Hr1G068170
EnsemblPlants:HORVU4Hr1G068170.2InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650InterPro:IPR014001InterPro:IPR035892
InterPro:Ig_E-setInterPro:P-loop_NTPasePFAM:PF00270PFAM:PF00271PFAM:PF02889PIRSF:PIRSF039073
PFscan:PS51192PFscan:PS51194PANTHER:PTHR24075PANTHER:PTHR24075:SF6SMART:SM00382SMART:SM00487
SMART:SM00490SMART:SM00973SUPFAM:SSF158702SUPFAM:SSF46785SUPFAM:SSF52540SUPFAM:SSF81296
InterPro:Sec63-domUniParc:UPI000B47803DInterPro:WH_DNA-bd_sfSEG:seg::
Description
No Description!
Coordinates
chrchr4H:-:565255028..565290648
Molecular Weight (calculated)
236514.0 Da
IEP (calculated)
6.593
GRAVY (calculated)
-0.260
Length
2089 amino acids
Sequence
(BLAST)
0001: AADSPRRSDS EMLAPLPRLT GSLRPHLDAD QAYLLRKAAL QARALPRPHD EWALARRFVP NWDEAPSDVR QAYKQFIGAV VELLNGEVVS EELQQVAQAV
0101: YRLFGTESDT TQKPLQRRNE LERLVGYSVQ DSVLKKLAQL AQKLRSLQQG SIQEFVQEDT NVVDGDDTSE FGASFDFKAP SRFVIDVTLD DDLPLGSGVL
0201: SSFQEEQHDA STTSYNSTAF AGPVNLRWLK DQCDLITRSG GSMLSGDELA MALCRVLRSN KAGDEIAGEL LDMVGDGAFE IVQDLLSHRK ELGDAIQHGL
0301: TILKSEKLSS NNQPKMPTYG TQVTIQTEYE RQLDKIKRKE GRRGKRGAEN GMNDFGADDF SSLLLASERK QPFDDMIGTG EGESSFQVTS LPQGTTRKHM
0401: KGYEEVKIPP TPTAPLEPNE KLIEIRELDD IAQAAFQGFK SLNRVQSRIF QATYNTNENI LVCAPTGAGK TNIAMIAVLH EVKQHFREGI LHKNEFKIVY
0501: VAPMKALAAE VTATFSHRLS PLNLAVKELT GDMQLTRNEI EETQMIVTTP EKWDVITRKS SDMALSMLVK LIIIDEVHLL NDDRGSVIET LVARTLRQVE
0601: SMQSMIRIVG LSATLPTYKE VAEFLRVNVD TGLFYFDSSY RPVPLAQQYI GITERDYAKK NDLFNSICYD KVVESIKQGY QALVFVHTRK DTGKTARTLI
0701: DLAAKAGEVE LFSNADHPQY GLIKKDVSKA KSREVIEFFD AGFGIHNAGM MRTDRNLMEH LFGDGLLKVL VCTATLAWGV NLPAHTVVIK GTQLYDAKAG
0801: GWRDLGMLDV MQIFGRAGRP QFDKSGEGII ITTHDKLAYY LRLLTSQLPI ESQFLGSLKD NLNAEVALGT VTNVREACAW LGYTYLFRRM KTNPLVYGIT
0901: WEEVIGDPSM GAKQRSFIID AARSLDKAKM MRYDEKSGNF YCTELGRIAS HFYLQYSSVE TYNEMLRRHM SESEVINMVA HSSEFENIVV REEEQDELET
1001: LARKACPLEV KGGPTDKHGK ISILIQVFIS RASVDSSSLH SDAQYISQSL GRIMRALFEI CLRRGWSEMT SLLLEYCKAV DRKIWPHLHP LRQFDRDISP
1101: EILWKLEERN VDLDRLYEME ENDIGALIRF SHQGRLVKQY VGYFPHVNLS ASVSPITRTV LKVDLLITPE FVWKDRHHGM SQRWLIIVED SENDTIYHSE
1201: LFTLTKKMAR GTPTKMSFNI PIFEPHPPQY YIRAVSDSWL HAESIFTVSF HNLTLPQTQI THTELLDLKP LPLSALGNKA YEDLYRFTHF NPIQTQAFHV
1301: LYHTETNVLL GAPTGSGKTI SAELAMLHLF NTQPDMKVVY IAPLKAIVRE RMNDWRHRLV TQLGKKMVEM TGDFTPDMVA LLSADIIIST PEKWDGISRS
1401: WHSRSYVMKV GLMILDEIHL LGADRGPILE VIVSRMRYIS SQTERSIRFV GLSTALANAR DLADWLGVRD DGLFNFKPSV RPVPLEVHIQ GYPGKFYCPR
1501: MNSMNKPAYA AICTHSPDKP VLIFVSSRRQ TRLTALDLIQ LAASDEKPTQ FLSMADNSLD MILSQVTDSN LRHTLQFGIG LHHAGLNDRD RSLVEELFSN
1601: NKIQVLVCTS TLAWGVNLPA HLVIIKGTEY YDGKTKRYVD YVITDILQMM GRAGRPQYDR HGKAVILVHE PKKSFYKKFL YEPFPVESNL REHLHDHINA
1701: EIVSSTIGNK EEAIIYLTWT YLYRRLVVNP SYYGLEDTET YTLNAYLSRL VETTLEDLED SGCIKVDDHS VQSLILGKIA SQYYLSYLTV SMFGSNIGPN
1801: TSLEAFVHIL SAAAEFDELP VRHNEDTLNR TLCEKVPYSV DQHHLDDPHV KANLLFQAHF SRAELPISDY ITDLKSILDQ SIRIIQAMID VCANSGWLSS
1901: ALTCMHLLQM IIQGLWFERD SSLWMLPSMN DNLLDHLKGR GVSTVLSLLD RSREELHKLL QPFSAAELYQ DLQHFPCLDV KVKLQNEHKE QSKPQMLNIR
2001: MQIKNTRRSP RAFSSKFPKA KQEAWWLVLG NTTSSELYGL KRISFADRVL NTRMELPPML NIQEAKLIVV SDCYLGFDQE VSLGHLGKV
Best Arabidopsis Sequence Match ( AT5G61140.2 )
(BLAST)
0001: MVHNSPCNKH KTTSISWTRI LAGRCTGLFV QVSNRRRFRT QAIAFFLGEP TRGENTTEEK NPKRHKYRDF VMLVQLPRLT SSLREPFDID QAYLRRKTIL
0101: QTLNKPRSSG NRLDESDLAK RIVHQWEGAS LEVRQAYKQF IGAVVELIDR EVPSDEFREV AFSAYRLFNN PVEEDDSDIN DNISISGKKL ELQNLVGHAV
0201: SDANVKNVAS FAQALYSIQP THQSETYADE VNGGAEFGAD LVFNLPARFL VEASLDETGF VDVESNDAHT SFSEGWSGVS DTKNNLSAGK FNLSWLRDAC
0301: GRMVRETNSQ LSREELAMAI CRFLDSDKPG EEIAGDLLDL VGDGAFETVQ DLIMHRKEIV DAIHHGQMIL KSDKAASNTQ SRMPTYGTQV TVQTESAKQI
0401: EKLRRKEEKK NKRNADLGLE SEISEANFSS LLEASEKKTA FEDLIGSGEA NSLALALPQG TVRKHLKGYE EVFIPPTPTA QMKPGEKLIE IKELDDFAQA
0501: AFHGYKSLNR IQSRIFQTVY HTNENILVCA PTGAGKTNIA MISVLHEIKQ HFRDGYLHKN EFKIVYVAPM KALAAEVTSA FSRRLAPLNM VVKELTGDMQ
0601: LTKTELEETQ MIVTTPEKWD VITRKSSDMS MSMLVKLLII DEVHLLNDDR GAVIEALVAR TLRQVESTQT MIRIVGLSAT LPSYLQVAQF LRVNTDTGLF
0701: YFDSSYRPVP LAQQYIGITE HNFAARNELL NEICYKKVVD SIKQGHQAMI FVHSRKDTSK TAEKLVDLAR QYETLDLFTN ETHPQFQLMK KDVMKSRNKD
0801: LVKFFEAGFG IHHAGMLRSD RTLTERLFSD GLLKVLVCTA TLAWGVNLPA HTVVIKGTQL YDAKAGGWKD LGMLDVMQIF GRAGRPQFDK SGEGIIITSH
0901: DKLAYYLRLL TSQLPIESQF ISSLKDNLNA EVVLGTVTNV KEACAWLGYT YLSIRMKLNP LAYGIGWEEI IADPSLSLKQ RALVADAARS LDKAKMMRFD
1001: EKSGNFYCTE LGRVASHFYI QYSSVETYNE MLKRHMNESE IINMVAHSSE FENIVVREEE QHELETLARS CCPLEVKGGP SNKHGKISIL IQLYISRGSI
1101: DAFSLVSDAS YISASLARIM RALFEICLRK GWCEMTLFML EYCKAVDRQL WPHQHPLRQF ERDLPSDILR KLEERRDDLD HLYEMEEKEI GALIRYNPGG
1201: RLVKQHLGYF PSIQLAATVS PITRTVLKVD LLITPNFIWK DRFHGTALRW WILIEDTEND YIYHSDLFTL TKRMARGEPQ KLSFTVPIFE PHPPQYYVHA
1301: VSDSWLHAET YFTISFHNLA LPEARTSHTE LLDLKPLPVT SLGNKLYESL YKFSHFNPIQ TQIFHVLYHT DNNVLVGAPT GSGKTISAEL AMLRLFSTQP
1401: DMKVVYIAPL KAIVRERMND WKKHLVAPLG KEMVEMTGDY TPDLVALLSA DIIISTPEKW DGISRNWHTR SYVKKVGLVI LDEIHLLGAD RGPILEVIVS
1501: RMRYISSQTE RSVRFVGLST ALANAGDLAD WLGVGEIGLF NFKPSVRPVP IEVHIQGYPG KYYCPRMNSM NKPAYAAICT HSPTKPVLIF VSSRRQTRLT
1601: ALDLIQFAAS DEHPRQFLSV SEEDLQMVLS QITDQNLRHT LQFGIGLHHA GLNDHDRSAV EELFTNNKIQ VLVSTSTLAW GVNLPAHLVI IKGTEYFDGK
1701: TKRYVDFPLT EILQMMGRAG RPQFDQHGKA VILVHEPKKS FYKKFLYEPF PVESSLKEKL HDHFNAEIVS GTIGNKEDAV HYLTWTYLFR RLMANPAYYG
1801: LEGTQDETIC SYLSRLVQTT FEDLEDSGCL KVNEDSVEPT MLGTIASQYY LCYMTVSMFG SNIGPDTSLE AFLHILAGAS EYDELPVRHN EENYNKTLSD
1901: RVRYPVDNNH LDDPHVKANL LFQAHFSQLA LPISDYNTDL KSVLDQSIRI LQAMIDICAN SGWLSSSLTC MRLLQMVMQG MWSDQDSSLW MIPCMNDLLL
2001: GSLTARGIHT LHQLLNLPRE TLQSVTENFP ASRLSQDLQR FPRIQMNVRL QKKDSDGKKK PSTLEIRLEK TSKRNSSRAL APRFPKVKDE AWWLVLGDTS
2101: TSELFAVKRV SFTGRLITRM ELPPNITSFQ DTKLILVSDC YLGFEQEHSI EQLARRG
Arabidopsis Description
BRR2CDExH-box ATP-dependent RNA helicase DExH14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNQ1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.