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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_17s0000g07230.t01 Wine grape cytosol 53.14 77.81
KXG39883 Sorghum mitochondrion 76.72 73.85
KRH54676 Soybean nucleus 76.82 73.8
Zm00001d048095_P005 Maize mitochondrion 76.62 73.75
TraesCS4D01G247100.1 Wheat mitochondrion, peroxisome 75.82 73.2
TraesCS4A01G057200.1 Wheat mitochondrion, peroxisome 75.82 73.2
TraesCS4B01G247900.1 Wheat mitochondrion, peroxisome 75.67 73.05
Solyc06g069480.2.1 Tomato nucleus 76.02 73.04
HORVU4Hr1G068170.2 Barley cytosol, nucleus 75.77 72.76
CDY47017 Canola cytosol 42.82 71.29
CDY42855 Canola nucleus, plastid 73.43 69.45
AT5G61140.2 Thale cress plastid 74.18 68.98
Bra029333.1-P Field mustard plastid 73.03 68.68
CDY47018 Canola cytosol 24.18 68.02
VIT_17s0000g07240.t01 Wine grape cytosol 23.63 66.67
GSMUA_Achr3P29700_001 Banana cytosol 35.94 39.18
GSMUA_Achr1P12000_001 Banana cytosol, nucleus, plastid 10.77 19.57
GSMUA_Achr2P17890_001 Banana cytosol, nucleus, plastid 8.57 17.0
GSMUA_Achr9P03710_001 Banana cytosol 9.32 14.18
GSMUA_Achr8P22600_001 Banana plastid 8.28 13.76
GSMUA_Achr3P05450_001 Banana nucleus 7.23 13.43
GSMUA_Achr11P... Banana nucleus 11.17 10.96
Protein Annotations
Gene3D:1.10.10.2530Gene3D:1.10.150.20Gene3D:1.10.3380.10Gene3D:2.60.40.150Gene3D:3.40.50.300MapMan:35.1
InterPro:AAA+_ATPaseInterPro:C2_domain_sfncoils:CoilInterPro:DEAD/DEAH_box_helicase_domGO:GO:0000166GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003729GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSMUA_Achr8G28180_001
EnsemblPlants:GSMUA_Achr8P28180_001EnsemblPlants:GSMUA_Achr8T28180_001InterPro:Helicase_ATP-bdInterPro:Helicase_CInterPro:IPR001650InterPro:IPR014001
InterPro:IPR035892UniProt:M0TUC1InterPro:P-loop_NTPasePFAM:PF00270PFAM:PF00271PFAM:PF02889
PIRSF:PIRSF039073PFscan:PS51192PFscan:PS51194PANTHER:PTHR24075PANTHER:PTHR24075:SF6SMART:SM00382
SMART:SM00487SMART:SM00490SMART:SM00973SUPFAM:SSF158702SUPFAM:SSF46785SUPFAM:SSF52540
InterPro:Sec63-domUniParc:UPI0002962F31InterPro:WH_DNA-bd_sfSEG:seg::
Description
Activating signal cointegrator 1 complex subunit 3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G28180_001]
Coordinates
chr8:+:31034009..31069925
Molecular Weight (calculated)
227742.0 Da
IEP (calculated)
6.622
GRAVY (calculated)
-0.230
Length
2006 amino acids
Sequence
(BLAST)
0001: MLIPLPRLTS SFRGPYDVDE AYLRRKRILE SLKSRRTNDE PELARKLIPR WDEASDALRQ TYRQYVGSVI ELINGEVTSE EFREVAKSAY DLFGHPDIDS
0101: SITKIIQEKK IELQQLVGYN IQDTVLLKVA SLAQRIYALQ NTSSEAVIGQ DLGADEHGDN RGEFGSNLSF HAPSRFIVDV PLENGASLTS DFQFKTASFD
0201: ANRNGHMAYI DHNLTADLKT INLRWLKDAC DLIVKNGASQ LSGDELAMAL CRVLLSDKAG DEIAGDLLDL VGDGAFETVQ DLLSHRKELV EAIQHGLLML
0301: KSEKMSSNSQ PKMPSYGTQV TIKTESERQI DKLRRKEEKR NKRVGEYGGT LDFPVESFSS LLLASEKKQP FDDLIGAGQG INSILVSALP QGTTRSHRSG
0401: YEEVRIPPTP TAAMRPDEKL IEIKELDDFA QAAFRGYKSL NRIQSRIYQT TYHTNENILV CAPTGAGKTN IAMIAILHEI KQNFKDGFLH KDEFKIVYVA
0501: PMKALAAEVT ATFSHRLSPL NLVVKELTGD MQLSKNELEE TQMIVTTPEK WDVITRKSSD MSLSMLVKLL IIDEVHLLND DRGSVIEALV ARTLRQVEST
0601: QSMIRIVGLS ATLPNYLEVA QFLHVNPESG LFFFDSSYRP VPLSQQYIGI SEKDYSKKNL LFNSICYDKV LDSIKQGHQA MVFVHSRKDT GKTARTLIEL
0701: ALKAGDLELF MNDKHPQFPL VKKEVTKSRN RELVELFESG FGIHHAGMLR SDRALTERLF SDGLLKVLVC TATLAWGVNL PAHTVIIKGT QLYDPKAGGW
0801: RDLGMLDVMQ IFGRAGRPQF DKSGEGIILT THDKLAYYLR LLTSQLPIES QFISSMKDNL NAEVALGTVT NVKEACAWLG YTYLFIRMKT NPLVYGISWD
0901: EVIGDPSLAS KQRSLIIDAA RALDKAKMMR FDEKSGNFYC TELGRIASHF YLQYSSVETY NEMLRRHMSD SEVINMVAHS SEFENIVVRE EEQDELENLS
1001: KMSCPLEIKG GTTDKHGKIS ILIQVYISHG SIESFSLISD AAYISASLGR IMRALFEICL RRGWCEMSSF MLQYCKAVDR QIWPYQHPLR QFDRELSAEV
1101: LRKLEERGTD LDRLYEMEEK DIGALIRYAP GGKLVKQFLG YFPSISLSAT VSPITRTVLK VDLLITPDFV WKDRFHGTAE RWWILVEDSE NDHIYHSELF
1201: ILTKKMARAE PQKISFTIPI FEPHPPQYYI RAVSDSWLYA ESLYTVSFHN LTLPETQVSH TELLDLKPLP VSSLGNEAYE NLYNFSHFNP IQTQSFHVLN
1301: HLDDNVLLGA PTGSGKTISA ELAMLHLFNT QPDMKVVYIA PLKAIVRERM NDWKKRLVSQ LGKKMVEMTG DFTPDLMALL SADIIISTPE KWDGISRSWQ
1401: SRSYVMKVGL MILDEIHLLG ADRGPILEVI VSRMRYISSQ TERSVRFVGL STALANARDL ADWLGIGENG LFNFKPSVRP VPLEMSRLLF SCKGYPGKFY
1501: CPRMNSMNKP AYAAICTHSP AKPVLIFVSS RRQTRLTALD LIQLAASDES PRQFLNIPEA SLEMVLSQIT DNNLRHTLRF GIGLHHAGLN DRDRSLVEEL
1601: FSNNKIQILV CTSTLAWGVN LPAHLVIIKG TEYYDGKAKR YVDFPITDIL QMMGRAGRPQ YDQHGKAVIL VHEPKKSFYK KFLYEPFPVE SNLREHLHNH
1701: INAEVVSGTI SHKEDAVHYL TWTYLFRRLV RNPSYYGLED TEASTLNSYL SRLMQDTFED LEDSGCIKMN ENSVEPLMLG SIASQYYLSY MTVSMFGSNI
1801: GPSTSLEVFL HILSAASEFD ELPVRHNEEN INKTLAEKVP HMVDEHHLDD PHVKANLLFQ AHFSRIELPV TDYVTDLKSV LDQSIRIIQA MIDICANSGW
1901: LSSTMTCMHL LQMVMQGLWF GKDSSLWMLP CMNEDILNHL NNIGILSLQD LLELPKAKFQ QMLQRYPASE LYQQEQNRGR KYDLLCLSLV HWVHHWLRQL
2001: TWKTWR
Best Arabidopsis Sequence Match ( AT5G61140.2 )
(BLAST)
0001: MVHNSPCNKH KTTSISWTRI LAGRCTGLFV QVSNRRRFRT QAIAFFLGEP TRGENTTEEK NPKRHKYRDF VMLVQLPRLT SSLREPFDID QAYLRRKTIL
0101: QTLNKPRSSG NRLDESDLAK RIVHQWEGAS LEVRQAYKQF IGAVVELIDR EVPSDEFREV AFSAYRLFNN PVEEDDSDIN DNISISGKKL ELQNLVGHAV
0201: SDANVKNVAS FAQALYSIQP THQSETYADE VNGGAEFGAD LVFNLPARFL VEASLDETGF VDVESNDAHT SFSEGWSGVS DTKNNLSAGK FNLSWLRDAC
0301: GRMVRETNSQ LSREELAMAI CRFLDSDKPG EEIAGDLLDL VGDGAFETVQ DLIMHRKEIV DAIHHGQMIL KSDKAASNTQ SRMPTYGTQV TVQTESAKQI
0401: EKLRRKEEKK NKRNADLGLE SEISEANFSS LLEASEKKTA FEDLIGSGEA NSLALALPQG TVRKHLKGYE EVFIPPTPTA QMKPGEKLIE IKELDDFAQA
0501: AFHGYKSLNR IQSRIFQTVY HTNENILVCA PTGAGKTNIA MISVLHEIKQ HFRDGYLHKN EFKIVYVAPM KALAAEVTSA FSRRLAPLNM VVKELTGDMQ
0601: LTKTELEETQ MIVTTPEKWD VITRKSSDMS MSMLVKLLII DEVHLLNDDR GAVIEALVAR TLRQVESTQT MIRIVGLSAT LPSYLQVAQF LRVNTDTGLF
0701: YFDSSYRPVP LAQQYIGITE HNFAARNELL NEICYKKVVD SIKQGHQAMI FVHSRKDTSK TAEKLVDLAR QYETLDLFTN ETHPQFQLMK KDVMKSRNKD
0801: LVKFFEAGFG IHHAGMLRSD RTLTERLFSD GLLKVLVCTA TLAWGVNLPA HTVVIKGTQL YDAKAGGWKD LGMLDVMQIF GRAGRPQFDK SGEGIIITSH
0901: DKLAYYLRLL TSQLPIESQF ISSLKDNLNA EVVLGTVTNV KEACAWLGYT YLSIRMKLNP LAYGIGWEEI IADPSLSLKQ RALVADAARS LDKAKMMRFD
1001: EKSGNFYCTE LGRVASHFYI QYSSVETYNE MLKRHMNESE IINMVAHSSE FENIVVREEE QHELETLARS CCPLEVKGGP SNKHGKISIL IQLYISRGSI
1101: DAFSLVSDAS YISASLARIM RALFEICLRK GWCEMTLFML EYCKAVDRQL WPHQHPLRQF ERDLPSDILR KLEERRDDLD HLYEMEEKEI GALIRYNPGG
1201: RLVKQHLGYF PSIQLAATVS PITRTVLKVD LLITPNFIWK DRFHGTALRW WILIEDTEND YIYHSDLFTL TKRMARGEPQ KLSFTVPIFE PHPPQYYVHA
1301: VSDSWLHAET YFTISFHNLA LPEARTSHTE LLDLKPLPVT SLGNKLYESL YKFSHFNPIQ TQIFHVLYHT DNNVLVGAPT GSGKTISAEL AMLRLFSTQP
1401: DMKVVYIAPL KAIVRERMND WKKHLVAPLG KEMVEMTGDY TPDLVALLSA DIIISTPEKW DGISRNWHTR SYVKKVGLVI LDEIHLLGAD RGPILEVIVS
1501: RMRYISSQTE RSVRFVGLST ALANAGDLAD WLGVGEIGLF NFKPSVRPVP IEVHIQGYPG KYYCPRMNSM NKPAYAAICT HSPTKPVLIF VSSRRQTRLT
1601: ALDLIQFAAS DEHPRQFLSV SEEDLQMVLS QITDQNLRHT LQFGIGLHHA GLNDHDRSAV EELFTNNKIQ VLVSTSTLAW GVNLPAHLVI IKGTEYFDGK
1701: TKRYVDFPLT EILQMMGRAG RPQFDQHGKA VILVHEPKKS FYKKFLYEPF PVESSLKEKL HDHFNAEIVS GTIGNKEDAV HYLTWTYLFR RLMANPAYYG
1801: LEGTQDETIC SYLSRLVQTT FEDLEDSGCL KVNEDSVEPT MLGTIASQYY LCYMTVSMFG SNIGPDTSLE AFLHILAGAS EYDELPVRHN EENYNKTLSD
1901: RVRYPVDNNH LDDPHVKANL LFQAHFSQLA LPISDYNTDL KSVLDQSIRI LQAMIDICAN SGWLSSSLTC MRLLQMVMQG MWSDQDSSLW MIPCMNDLLL
2001: GSLTARGIHT LHQLLNLPRE TLQSVTENFP ASRLSQDLQR FPRIQMNVRL QKKDSDGKKK PSTLEIRLEK TSKRNSSRAL APRFPKVKDE AWWLVLGDTS
2101: TSELFAVKRV SFTGRLITRM ELPPNITSFQ DTKLILVSDC YLGFEQEHSI EQLARRG
Arabidopsis Description
BRR2CDExH-box ATP-dependent RNA helicase DExH14 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNQ1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.