Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0279000-01 | Rice | mitochondrion | 62.85 | 81.96 |
| EER87693 | Sorghum | cytosol | 80.93 | 81.82 |
| TraesCS7D01G010500.1 | Wheat | cytosol | 79.05 | 80.97 |
| Zm00001d045590_P005 | Maize | cytosol, nucleus, plastid | 79.94 | 80.9 |
| TraesCS4A01G484300.2 | Wheat | cytosol | 78.95 | 80.3 |
| VIT_06s0009g01750.t01 | Wine grape | cytosol | 78.56 | 79.74 |
| PGSC0003DMT400053368 | Potato | nucleus | 76.88 | 78.43 |
| Solyc01g103080.2.1 | Tomato | nucleus | 76.68 | 78.3 |
| KRH46878 | Soybean | nucleus | 75.2 | 77.57 |
| Bra027835.1-P | Field mustard | nucleus | 72.53 | 76.78 |
| HORVU7Hr1G001080.1 | Barley | cytosol, nucleus, plastid | 78.46 | 76.27 |
| Bra035425.1-P | Field mustard | nucleus | 28.46 | 76.19 |
| CDY45149 | Canola | nucleus | 28.46 | 76.19 |
| AT1G59760.1 | Thale cress | cytosol, nucleus, plastid | 74.21 | 76.01 |
| CDY30903 | Canola | nucleus | 73.81 | 75.68 |
| CDY45148 | Canola | endoplasmic reticulum | 46.34 | 75.4 |
| CDY65064 | Canola | nucleus | 73.22 | 74.77 |
| TraesCS7A01G010800.1 | Wheat | cytosol | 78.56 | 74.65 |
| Bra035426.1-P | Field mustard | cytosol, golgi, plastid | 45.65 | 74.52 |
| CDY33604 | Canola | cytosol | 16.8 | 57.82 |
| GSMUA_Achr3P05450_001 | Banana | nucleus | 44.47 | 41.67 |
| GSMUA_Achr9P03710_001 | Banana | cytosol | 33.6 | 25.78 |
| GSMUA_Achr8P22600_001 | Banana | plastid | 24.11 | 20.23 |
| GSMUA_Achr1P12000_001 | Banana | cytosol, nucleus, plastid | 13.34 | 12.23 |
| GSMUA_Achr3P29700_001 | Banana | cytosol | 15.71 | 8.64 |
| GSMUA_Achr8P28180_001 | Banana | cytosol | 17.0 | 8.57 |
| GSMUA_Achr11P... | Banana | nucleus | 15.02 | 7.44 |
Protein Annotations
| Gene3D:1.10.3380.30 | Gene3D:1.20.1500.20 | MapMan:16.8.1.2.3.1 | Gene3D:2.40.30.300 | Gene3D:3.40.50.300 | ncoils:Coil |
| InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003724 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0006401 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0031125 | EnsemblPlantsGene:GSMUA_Achr2G17890_001 |
| EnsemblPlants:GSMUA_Achr2P17890_001 | EnsemblPlants:GSMUA_Achr2T17890_001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| UniProt:M0S8Y0 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF08148 | PFAM:PF13234 |
| PIRSF:PIRSF005198 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR12131 | PANTHER:PTHR12131:SF7 | SMART:SM00487 |
| SMART:SM00490 | SMART:SM01142 | SUPFAM:SSF52540 | InterPro:Ski2-like | InterPro:Ski2_C | UniParc:UPI000296A46C |
| InterPro:rRNA_proc-arch_dom | SEG:seg | : | : | : | : |
Description
Superkiller viralicidic activity 2-like 2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G17890_001]
Coordinates
chr2:-:18367514..18378465
Molecular Weight (calculated)
115734.0 Da
IEP (calculated)
6.374
GRAVY (calculated)
-0.277
Length
1012 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSLKRKALE DSNPEFVPPS KSPREAAVVR LDEPVACLHD VSYPDGYAAP TRPRPASENS KTPAREFPFE LDPFQLEAIK CLDSGESVMV SAHTSAGKTV
0101: VALYAIAMSL RDQQRVIYTS PIKALSNQKY REFKEEFSDV GLMTGDVTIE PNASCLVMTT EIWRSMQYKG SEIMREVAWV IFDEVHYMRD RERGVVWEES
0201: IVMAPKNSRF VFLSATVPNA KEFADWVAKV HRKPCHIVYT DYRPTPLQHY IFPSGGNGLY LVVDEKGKFR EDSFQKALNA LVPAEENKRD NGKWQKALLA
0301: GKPREESDIF KMVKMIIQRQ YDPVILFSFS KRECEFLAMQ MAKLDLNEED EKVNIETIFW SAMDILSDDD KNLEAKVLFP PFLFFSHPFF LGTDHEFNLL
0401: SVSNMLPLLK RGIGVHHSGL LPILKEVIEI LFQEGLIKCL FATETFSIGL NMPAKTVVFT NVRKFDGDKF RWISSGEYIQ MSGRAGRRGI DQRGICILMV
0501: DEKMEPSTAK LMVKGSADSL NSAFHLSYNM LLNQIRCEDG DPEKLLRNSF YQFQSDQSLP DLEKQLKELK MERDSMVIEE EESLKDYYNL LQQYRSLKND
0601: VRDIVFSPKY CLPFLQPGRL ARIRIVGDDK MPSFSGEEQV TWGVIISFER VKGSTEDRRP EDANYTCDVL TRCVVNKEGM KKTTKIVPLN ERGEPVVVSL
0701: PLSQVDSLSS IRLFIPKDLL PLEARENTLK KVSEVLLRFA KDGIPLLDPE EDMKVQSNSY RKAIRRIEAI ESLFRKHEIR NSPLIEQKLK VFHSKQDLTA
0801: RIKSIRKALQ TSTALAFKDE LKARKRVLRR LGYITSEDVV ELKGKVACEI SSADELTLTE LMFSGILKDA NLEEMVALLS CFVWQEKLQD APKPREGLDL
0901: LYSQLQEIAR RVANVQLECK IQIDVENFVN AFRPDIMEAV YSWAKGSKFY QIMEVAQVFE GSLIRAIKRL EEVLQQLILA AKSIGEIELE SKFEEAVTKI
1001: KRDIVFAASL YL
0101: VALYAIAMSL RDQQRVIYTS PIKALSNQKY REFKEEFSDV GLMTGDVTIE PNASCLVMTT EIWRSMQYKG SEIMREVAWV IFDEVHYMRD RERGVVWEES
0201: IVMAPKNSRF VFLSATVPNA KEFADWVAKV HRKPCHIVYT DYRPTPLQHY IFPSGGNGLY LVVDEKGKFR EDSFQKALNA LVPAEENKRD NGKWQKALLA
0301: GKPREESDIF KMVKMIIQRQ YDPVILFSFS KRECEFLAMQ MAKLDLNEED EKVNIETIFW SAMDILSDDD KNLEAKVLFP PFLFFSHPFF LGTDHEFNLL
0401: SVSNMLPLLK RGIGVHHSGL LPILKEVIEI LFQEGLIKCL FATETFSIGL NMPAKTVVFT NVRKFDGDKF RWISSGEYIQ MSGRAGRRGI DQRGICILMV
0501: DEKMEPSTAK LMVKGSADSL NSAFHLSYNM LLNQIRCEDG DPEKLLRNSF YQFQSDQSLP DLEKQLKELK MERDSMVIEE EESLKDYYNL LQQYRSLKND
0601: VRDIVFSPKY CLPFLQPGRL ARIRIVGDDK MPSFSGEEQV TWGVIISFER VKGSTEDRRP EDANYTCDVL TRCVVNKEGM KKTTKIVPLN ERGEPVVVSL
0701: PLSQVDSLSS IRLFIPKDLL PLEARENTLK KVSEVLLRFA KDGIPLLDPE EDMKVQSNSY RKAIRRIEAI ESLFRKHEIR NSPLIEQKLK VFHSKQDLTA
0801: RIKSIRKALQ TSTALAFKDE LKARKRVLRR LGYITSEDVV ELKGKVACEI SSADELTLTE LMFSGILKDA NLEEMVALLS CFVWQEKLQD APKPREGLDL
0901: LYSQLQEIAR RVANVQLECK IQIDVENFVN AFRPDIMEAV YSWAKGSKFY QIMEVAQVFE GSLIRAIKRL EEVLQQLILA AKSIGEIELE SKFEEAVTKI
1001: KRDIVFAASL YL
001: MGSVKRKSVE ESSDSAPPQK VQREDDSTQI INEELVGCVH DVSFPENYVP LAPSVHNKPP AKDFPFTLDS FQSEAIKCLD NGESVMVSAH TSAGKTVVAS
101: YAIAMSLKEN QRVIYTSPIK ALSNQKYRDF KEEFSDVGLM TGDVTIDPNA SCLVMTTEIL RSMQYKGSEI MREVAWIIFD EVHYMRDSER GVVWEESIVM
201: APKNSRFVFL SATVPNAKEF ADWVAKVHQQ PCHIVYTDYR PTPLQHYVFP AGGNGLYLVV DEKSKFHEDS FQKSLNALVP TNESDKKRDN GKFQKGLVIG
301: KLGEESDIFK LVKMIIQRQY DPVILFSFSK KECEALAMQM SKMVLNSDDE KDAVETIFAS AIDMLSDDDK KLPQVSNILP ILKRGIGVHH SGLLPILKEV
401: IEILFQEGLI KCLFATETFS IGLNMPAKTV VFTNVRKFDG DKFRWLSSGE YIQMSGRAGR RGIDKRGICI LMVDEKMEPA VAKSMLKGSA DSLNSAFHLS
501: YNMLLNQLRC EEGDPENLLR NSFFQFQADR AIPDLEKQIK SLEEERDSLV IEEEESLKNY YNLILQYKSL KKDIREIVFT PKYCLPFLLP NRAVCLDCTN
601: DDEEPQSFSI EDQDTWGVIM KFNKVKSLSE DDDSRRPEDA NYTVDVLTRC MVSKDGVGKK KVKAVPIKER GEPVVVTVPL SQIKSLSSAI MNIPKDLVPL
701: EARENALKKV SELLSRHPDG IPLDPEVDMK IKSSSYKKTV RRLEALENLF EKHKIAKSPL ITEKLKVLQM KEELIAKIKS LKKTVRSSTA LAFKDELKAR
801: KRVLRRLGYI TSDNVVELKG KVACEISSAE ELTLTELMFS GIFKDAKVEE LVSLLSCFVW RERLPDAAKP REELDLLFIQ LQDTARRVAE VQLDCKVEID
901: VESFVQSFRP DIMEAVYAWA KGSKFYEVME IARVFEGSLI RAIRRMEEVL QQLIVAAKSI GETQLEAKLE EAVSKIKRDI VFAASLYL
101: YAIAMSLKEN QRVIYTSPIK ALSNQKYRDF KEEFSDVGLM TGDVTIDPNA SCLVMTTEIL RSMQYKGSEI MREVAWIIFD EVHYMRDSER GVVWEESIVM
201: APKNSRFVFL SATVPNAKEF ADWVAKVHQQ PCHIVYTDYR PTPLQHYVFP AGGNGLYLVV DEKSKFHEDS FQKSLNALVP TNESDKKRDN GKFQKGLVIG
301: KLGEESDIFK LVKMIIQRQY DPVILFSFSK KECEALAMQM SKMVLNSDDE KDAVETIFAS AIDMLSDDDK KLPQVSNILP ILKRGIGVHH SGLLPILKEV
401: IEILFQEGLI KCLFATETFS IGLNMPAKTV VFTNVRKFDG DKFRWLSSGE YIQMSGRAGR RGIDKRGICI LMVDEKMEPA VAKSMLKGSA DSLNSAFHLS
501: YNMLLNQLRC EEGDPENLLR NSFFQFQADR AIPDLEKQIK SLEEERDSLV IEEEESLKNY YNLILQYKSL KKDIREIVFT PKYCLPFLLP NRAVCLDCTN
601: DDEEPQSFSI EDQDTWGVIM KFNKVKSLSE DDDSRRPEDA NYTVDVLTRC MVSKDGVGKK KVKAVPIKER GEPVVVTVPL SQIKSLSSAI MNIPKDLVPL
701: EARENALKKV SELLSRHPDG IPLDPEVDMK IKSSSYKKTV RRLEALENLF EKHKIAKSPL ITEKLKVLQM KEELIAKIKS LKKTVRSSTA LAFKDELKAR
801: KRVLRRLGYI TSDNVVELKG KVACEISSAE ELTLTELMFS GIFKDAKVEE LVSLLSCFVW RERLPDAAKP REELDLLFIQ LQDTARRVAE VQLDCKVEID
901: VESFVQSFRP DIMEAVYAWA KGSKFYEVME IARVFEGSLI RAIRRMEEVL QQLIVAAKSI GETQLEAKLE EAVSKIKRDI VFAASLYL
Arabidopsis Description
MTR4DExH-box ATP-dependent RNA helicase DExH9 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIF2]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.