Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0026g01000.t01 | Wine grape | cytosol | 65.17 | 73.87 |
| Zm00001d017982_P001 | Maize | plastid | 67.0 | 68.77 |
| Os02t0739000-01 | Rice | plastid, vacuole | 66.42 | 67.94 |
| TraesCS6D01G291500.1 | Wheat | plastid | 66.17 | 67.74 |
| OQU85441 | Sorghum | plastid | 66.09 | 66.97 |
| HORVU6Hr1G076860.2 | Barley | plastid | 66.25 | 66.81 |
| TraesCS6A01G312100.1 | Wheat | plastid | 66.09 | 66.2 |
| TraesCS6B01G342300.1 | Wheat | plastid | 65.92 | 66.14 |
| PGSC0003DMT400058295 | Potato | plastid | 62.94 | 65.66 |
| Solyc05g006530.2.1 | Tomato | nucleus | 62.6 | 65.42 |
| KRH74713 | Soybean | nucleus | 61.94 | 64.29 |
| CDY38782 | Canola | plastid | 61.28 | 63.43 |
| Bra016240.1-P | Field mustard | plastid | 60.86 | 62.95 |
| CDY11624 | Canola | plastid | 59.87 | 62.67 |
| AT1G70070.1 | Thale cress | plastid | 60.53 | 62.34 |
| GSMUA_Achr2P17890_001 | Banana | cytosol, nucleus, plastid | 20.23 | 24.11 |
| GSMUA_Achr3P05450_001 | Banana | nucleus | 19.73 | 22.04 |
| GSMUA_Achr9P03710_001 | Banana | cytosol | 20.73 | 18.95 |
| GSMUA_Achr1P12000_001 | Banana | cytosol, nucleus, plastid | 10.12 | 11.05 |
| GSMUA_Achr3P29700_001 | Banana | cytosol | 13.1 | 8.59 |
| GSMUA_Achr8P28180_001 | Banana | cytosol | 13.76 | 8.28 |
| GSMUA_Achr11P... | Banana | nucleus | 13.1 | 7.73 |
Protein Annotations
| Gene3D:1.10.3380.30 | MapMan:16.12.2.1.1.3 | Gene3D:3.40.50.300 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000003 |
| GO:GO:0000166 | GO:GO:0000373 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006397 | GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 |
| GO:GO:0010494 | GO:GO:0010497 | GO:GO:0016441 | GO:GO:0040029 | EnsemblPlantsGene:GSMUA_Achr8G22600_001 | EnsemblPlants:GSMUA_Achr8P22600_001 |
| EnsemblPlants:GSMUA_Achr8T22600_001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | UniProt:M0TSR3 |
| InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF08148 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR24031 |
| PANTHER:PTHR24031:SF360 | SMART:SM00487 | SMART:SM00490 | SMART:SM01142 | SUPFAM:SSF52540 | InterPro:Ski2_C |
| UniParc:UPI000296CDA2 | SEG:seg | : | : | : | : |
Description
DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G22600_001]
Coordinates
chr8:+:27142676..27168653
Molecular Weight (calculated)
136099.0 Da
IEP (calculated)
5.854
GRAVY (calculated)
-0.290
Length
1206 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLSLALPLPC SSSSPACLFD SFLPPTSRRR YRFLRFLSPR SAVSPRARLH LVPLCANPLG SASPIREQLS DTDEDEEDDD DDEVAAMEYD DGLLADVDRE
0101: EEEREGETAQ LEAEAGPSAK FEEHKWERVT RLLAEVREFG EEIIDYEELA GIYDFPIDKF QRLAIQAFLR GSSVVVSAPT SSGKTLIAEA AAVATVARGR
0201: RLFYTTPLKA LSNQKFRDFR RTFGDAYVGL LTGDSAINKE APILIMTTEI LRNMLYKSVG MISSASRLFH VDVIVLDEVH YLSDISRGTV WEEIVIYSPK
0301: EVQLICLSAT VANPDELAGW IGQIHGKTEL VTSTKRPVPL TWHFSLKNSL LPLFDEKGKR MNRKILSNLL NEFIIYSITN CGSSIISSPP SMFHLNAFSW
0401: KLSLDYLQTS ISRGEHFNES KTKKHRMGKV ERGYSNVARL SQQTPLSKND MNYIRRSQVP QIKDTLWHLA ERDMLPAIWF IFSRRGCDAA VQYLEDCKLL
0501: DECEAGEVEL EYRRFKKQYP DAVREVAVKG LLHGIASHHA GCLPLWKSFV EELFQRGLVK VVFATETLAA GINMPARTAI ISSLSKKGET GRTFLSPNEL
0601: FQMAGRAGRR GIDEVGHAVL IQTPYEGAEE CYELLSAGLE PLVSQFTASY GMVLNLLAGA KVTRKLHDPD GTKLSHCGRT LEEARKLVEQ SFGNYVGSNV
0701: MQAAKEELEK IQHEIELLSV EVTEDAIDRK CQEQLSENDY AEISKLQEEL RAEKRTRTEL RRQMEIKRMA AWRPLLDKFG SGNLPFICLR YKDKEGVQHN
0801: IPAVYVGKLS SSSVQKIMNM VKLDSSDFDN LETGSRDVAS HEDGKPAYYV ALSSDNSWYL FTEKWLKTIY RTGFPNISSL DGDILPREML RNLLIKEDLQ
0901: WEKIADSEFG SLWSIGGSLE TWSWSLNVPV LSSLSEDDEV ANQSEAYRDA VGRYKEQRSR VSQLKKKITN TKGFKEFKKI IDMTKFIKEK MERLNARSNR
1001: LSKRIGQIEP TGWKEFLQIS KVIQEARALD LSTQVIYPLG ETAAAIRGEN ELWLAMILRN KVLLNLKPAQ LAAVCGSLVS EGIKVRPWKS NSYIYEPSSI
1101: VIDVIYLLEE QRISLIQIQD KYGVKIPCEL DGQFSGMVEA WASGLTWREI MMDCAMDEGD LARLLRRTID LLAQIPKLPD IDPLLQNNAL LASSVMDRAP
1201: INELAG
0101: EEEREGETAQ LEAEAGPSAK FEEHKWERVT RLLAEVREFG EEIIDYEELA GIYDFPIDKF QRLAIQAFLR GSSVVVSAPT SSGKTLIAEA AAVATVARGR
0201: RLFYTTPLKA LSNQKFRDFR RTFGDAYVGL LTGDSAINKE APILIMTTEI LRNMLYKSVG MISSASRLFH VDVIVLDEVH YLSDISRGTV WEEIVIYSPK
0301: EVQLICLSAT VANPDELAGW IGQIHGKTEL VTSTKRPVPL TWHFSLKNSL LPLFDEKGKR MNRKILSNLL NEFIIYSITN CGSSIISSPP SMFHLNAFSW
0401: KLSLDYLQTS ISRGEHFNES KTKKHRMGKV ERGYSNVARL SQQTPLSKND MNYIRRSQVP QIKDTLWHLA ERDMLPAIWF IFSRRGCDAA VQYLEDCKLL
0501: DECEAGEVEL EYRRFKKQYP DAVREVAVKG LLHGIASHHA GCLPLWKSFV EELFQRGLVK VVFATETLAA GINMPARTAI ISSLSKKGET GRTFLSPNEL
0601: FQMAGRAGRR GIDEVGHAVL IQTPYEGAEE CYELLSAGLE PLVSQFTASY GMVLNLLAGA KVTRKLHDPD GTKLSHCGRT LEEARKLVEQ SFGNYVGSNV
0701: MQAAKEELEK IQHEIELLSV EVTEDAIDRK CQEQLSENDY AEISKLQEEL RAEKRTRTEL RRQMEIKRMA AWRPLLDKFG SGNLPFICLR YKDKEGVQHN
0801: IPAVYVGKLS SSSVQKIMNM VKLDSSDFDN LETGSRDVAS HEDGKPAYYV ALSSDNSWYL FTEKWLKTIY RTGFPNISSL DGDILPREML RNLLIKEDLQ
0901: WEKIADSEFG SLWSIGGSLE TWSWSLNVPV LSSLSEDDEV ANQSEAYRDA VGRYKEQRSR VSQLKKKITN TKGFKEFKKI IDMTKFIKEK MERLNARSNR
1001: LSKRIGQIEP TGWKEFLQIS KVIQEARALD LSTQVIYPLG ETAAAIRGEN ELWLAMILRN KVLLNLKPAQ LAAVCGSLVS EGIKVRPWKS NSYIYEPSSI
1101: VIDVIYLLEE QRISLIQIQD KYGVKIPCEL DGQFSGMVEA WASGLTWREI MMDCAMDEGD LARLLRRTID LLAQIPKLPD IDPLLQNNAL LASSVMDRAP
1201: INELAG
0001: MNTLPVVSLT ASSSFKFFHF PSLHRSLSHS PNFSFTKSLI LNPNHLSFKS TLNSLSPSQS QLYEEEDDEE EEEEDEDDDD EAADEYDNIS DEIRNSDDDD
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
Arabidopsis Description
ISE2DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.