Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85441 | Sorghum | plastid | 92.51 | 91.34 |
| Os02t0739000-01 | Rice | plastid, vacuole | 88.17 | 87.87 |
| TraesCS6D01G291500.1 | Wheat | plastid | 85.45 | 85.23 |
| HORVU6Hr1G076860.2 | Barley | plastid | 85.28 | 83.78 |
| TraesCS6B01G342300.1 | Wheat | plastid | 85.62 | 83.69 |
| TraesCS6A01G312100.1 | Wheat | plastid | 85.62 | 83.55 |
| VIT_01s0026g01000.t01 | Wine grape | cytosol | 63.66 | 70.3 |
| GSMUA_Achr8P22600_001 | Banana | plastid | 68.77 | 67.0 |
| Solyc05g006530.2.1 | Tomato | nucleus | 63.4 | 64.56 |
| PGSC0003DMT400058295 | Potato | plastid | 63.49 | 64.53 |
| KRH74713 | Soybean | nucleus | 62.89 | 63.6 |
| CDY38782 | Canola | plastid | 61.53 | 62.06 |
| Bra016240.1-P | Field mustard | plastid | 61.36 | 61.84 |
| CDY11624 | Canola | plastid | 60.26 | 61.46 |
| AT1G70070.1 | Thale cress | plastid | 60.17 | 60.38 |
| Zm00001d008777_P008 | Maize | nucleus | 20.6 | 24.06 |
| Zm00001d045590_P005 | Maize | cytosol, nucleus, plastid | 20.09 | 23.6 |
| Zm00001d015314_P003 | Maize | cytosol | 20.85 | 17.35 |
| Zm00001d051111_P001 | Maize | nucleus | 11.74 | 10.67 |
| Zm00001d048095_P005 | Maize | mitochondrion | 15.06 | 8.49 |
| Zm00001d023796_P033 | Maize | nucleus, plastid | 14.47 | 8.12 |
| Zm00001d022286_P003 | Maize | plastid | 14.47 | 7.78 |
Protein Annotations
| Gene3D:1.10.3380.30 | EntrezGene:103627701 | MapMan:16.12.2.1.1.3 | Gene3D:3.40.50.300 | UniProt:A0A1D6HJR7 | ProteinID:AQK74703.1 |
| ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000003 | GO:GO:0000166 | GO:GO:0000373 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006397 |
| GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009570 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 | GO:GO:0010494 |
| GO:GO:0010497 | GO:GO:0016441 | GO:GO:0016787 | GO:GO:0040029 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF08148 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF360 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM01142 | SUPFAM:SSF52540 | InterPro:Ski2_C | UniParc:UPI0004DE9E0B | EnsemblPlantsGene:Zm00001d017982 | EnsemblPlants:Zm00001d017982_P001 |
| EnsemblPlants:Zm00001d017982_T001 | SEG:seg | : | : | : | : |
Description
DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
Coordinates
chr5:+:211334503..211343257
Molecular Weight (calculated)
133164.0 Da
IEP (calculated)
5.232
GRAVY (calculated)
-0.452
Length
1175 amino acids
Sequence
(BLAST)
(BLAST)
0001: MHCIAPRLLL LPLPTVSRHA LSPTQTPPLP PLLPSRACKF HLASARSPSR AAASVSGDDE DEEVDVDDDE DDETTIRNVD DEYDDDFEDG DEGDEGDEEA
0101: VDEESGGEYE EEAGEDEDKR EDTAARRRDS EEYKSRRVAK LVAEVREFGE DVIDYNELAG IYDFPIDKFQ RLAIQAFLRG SSVVVSAPTS SGKTLIAEAA
0201: AVATVARGRR LFYTTPLKAL SNQKFRDFRN TFGDHNVGLL TGDSAINKDA QILIMTTEIL RNMLYQSVGM TASEGRLFQV DVIVLDEVHY LSDISRGTVW
0301: EETVIYCPKE VQLICLSATV ANPDELAGWI SQIHGKTELV TSNKRPVPLT WHFSKKYSLQ PLLDGKGKKM NRKLRMSNSQ NLASPKSEFY YVKGKRRFRT
0401: NKIEQGNSRP LDISKQVQLS KHELSNMRRS QVPLIRDTLS QLWENGMLPA IWFIFSRRGC DAAVEYLEDC RLLHDCEASE VELELRRFKM QYPDAIRESA
0501: VKGLMRGVAA HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKR IDAGRQLLTP NELFQMAGRA GRRGIDTVGH AVLVQTPYEG
0601: PEECCDIIFA GLEPLVSQFT ASYGMVLNLL AGSKVTHKQK ESDDVKDKHS GRTLEEARKL VEQSFGNYVG SNVMVAAKEE TERIRQEIQY LSSEITDESI
0701: DRKCREELSE EDYAEISLLQ KRLKEEKQIR NELKKKMELE RMAAWKNRLE EFESGHLPFM CLQYKDKDSI QHTIPAVFIG NLNSFADQKI MNMVEDDSLV
0801: SGKPKRDSGE QLYRPSYYVA LSSDNSWYLF TEKWIKTVYK TGLPAVPSVE GGTLPRETLK QLLLREELVW DKVEKSEYGS LLSMEGSLDT WSWSLNVPVL
0901: NSLSEDNEVE RFSQEHQDAV ECYKQQRRKV SHLKKTIKAT RGFKEFQKII DMRNFTKEKI ERLEARSRRL TRRIRQIEPT GWKEFLQISK VIQEARALDI
1001: NTQVIYPLGE TAAAIRGENE LWLAMVLRNK VLLDLKPSQL AAVCGSLVSE GIKLRPWKNS SYVYEPSSVV TGVISYLEEQ RNSLIDLQER HSVKIPCEID
1101: AQFAGMVEAW ASGLTWREIM MDSAMDDGDL ARLLRRSIDL LAQIPKLPDI DPVLQKNAQI ACSVMDRVPI SELAG
0101: VDEESGGEYE EEAGEDEDKR EDTAARRRDS EEYKSRRVAK LVAEVREFGE DVIDYNELAG IYDFPIDKFQ RLAIQAFLRG SSVVVSAPTS SGKTLIAEAA
0201: AVATVARGRR LFYTTPLKAL SNQKFRDFRN TFGDHNVGLL TGDSAINKDA QILIMTTEIL RNMLYQSVGM TASEGRLFQV DVIVLDEVHY LSDISRGTVW
0301: EETVIYCPKE VQLICLSATV ANPDELAGWI SQIHGKTELV TSNKRPVPLT WHFSKKYSLQ PLLDGKGKKM NRKLRMSNSQ NLASPKSEFY YVKGKRRFRT
0401: NKIEQGNSRP LDISKQVQLS KHELSNMRRS QVPLIRDTLS QLWENGMLPA IWFIFSRRGC DAAVEYLEDC RLLHDCEASE VELELRRFKM QYPDAIRESA
0501: VKGLMRGVAA HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKR IDAGRQLLTP NELFQMAGRA GRRGIDTVGH AVLVQTPYEG
0601: PEECCDIIFA GLEPLVSQFT ASYGMVLNLL AGSKVTHKQK ESDDVKDKHS GRTLEEARKL VEQSFGNYVG SNVMVAAKEE TERIRQEIQY LSSEITDESI
0701: DRKCREELSE EDYAEISLLQ KRLKEEKQIR NELKKKMELE RMAAWKNRLE EFESGHLPFM CLQYKDKDSI QHTIPAVFIG NLNSFADQKI MNMVEDDSLV
0801: SGKPKRDSGE QLYRPSYYVA LSSDNSWYLF TEKWIKTVYK TGLPAVPSVE GGTLPRETLK QLLLREELVW DKVEKSEYGS LLSMEGSLDT WSWSLNVPVL
0901: NSLSEDNEVE RFSQEHQDAV ECYKQQRRKV SHLKKTIKAT RGFKEFQKII DMRNFTKEKI ERLEARSRRL TRRIRQIEPT GWKEFLQISK VIQEARALDI
1001: NTQVIYPLGE TAAAIRGENE LWLAMVLRNK VLLDLKPSQL AAVCGSLVSE GIKLRPWKNS SYVYEPSSVV TGVISYLEEQ RNSLIDLQER HSVKIPCEID
1101: AQFAGMVEAW ASGLTWREIM MDSAMDDGDL ARLLRRSIDL LAQIPKLPDI DPVLQKNAQI ACSVMDRVPI SELAG
0001: MNTLPVVSLT ASSSFKFFHF PSLHRSLSHS PNFSFTKSLI LNPNHLSFKS TLNSLSPSQS QLYEEEDDEE EEEEDEDDDD EAADEYDNIS DEIRNSDDDD
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
0101: DDEETEFSVD LPTESARERV EFRWQRVEKL RSLVRDFGVE MIDIDELISI YDFRIDKFQR LAIEAFLRGS SVVVSAPTSS GKTLIAEAAA VSTVAKGRRL
0201: FYTTPLKALS NQKFREFRET FGDDNVGLLT GDSAINKDAQ IVIMTTEILR NMLYQSVGMA SSGTGLFHVD AIVLDEVHYL SDISRGTVWE EIVIYCPKEV
0301: QLICLSATVA NPDELAGWIG EIHGKTELVT STRRPVPLTW YFSTKHSLLP LLDEKGINVN RKLSLNYLQL SASEARFRDD DDGYRKRRSK KRGGDTSYNN
0401: LVNVTDYPLS KNEINKIRRS QVPQISDTLW HLQGKNMLPA IWFIFNRRGC DAAVQYVENF QLLDDCEKSE VELALKKFRV LYPDAVRESA EKGLLRGIAA
0501: HHAGCLPLWK SFIEELFQRG LVKVVFATET LAAGINMPAR TAVISSLSKK AGNERIELGP NELYQMAGRA GRRGIDEKGY TVLVQTAFEG AEECCKLVFA
0601: GVKPLVSQFT ASYGMVLNLV AGSKVTRKSS GTEAGKVLQA GRSLEEAKKL VEKSFGNYVS SNVTVAAKQE LAEIDNKIEI LSSEISDEAI DKKSRKLLSA
0701: RDYKEITVLK EELREEKRKR AEQRRRMELE RFLALKPLLK GMEEGNLPFI CLEFKDSEGR EQSVPAVYLG HIDSFQGSKL QKMMSLDESF ALNLIEDELA
0801: ADEPGKPNVK PSYYVALGSD NSWYLFTEKW VRTVYRTGFP NIALALGDAL PREIMKNLLD KADMQWDKLA ESELGSLWRL EGSLETWSWS LNVPVLSSLS
0901: DEDEVLHMSE EYDNAAQKYK EQRSKISRLK KKMSRSEGFR EYKKILENAN LTVEKMKRLK ARSRRLINRL EQIEPSGWKD FMRISNVIHE SRALDINTHL
1001: IFPLGETAAA IRGENELWLA MVLRNKALVD LKPPQLAGVC ASLVSEGIKV RPWRDNNYIY EPSDTVVDMV NFLEDQRSSL IKLQEKHEVM IPCCLDVQFS
1101: GMVEAWASGL SWKEMMMECA MDEGDLARLL RRTIDLLAQI PKLPDIDPVL QRSAAAAADI MDRPPISELA G
Arabidopsis Description
ISE2DExH-box ATP-dependent RNA helicase DExH15 chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:B9DFG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.